| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899047
Identifier: 159899047
GI number: 159899047
Start: 3233289
End: 3234299
Strand: Direct
Name: 159899047
Synonym: Haur_2528
Alternate gene names: NA
Gene position: 3233289-3234299 (Clockwise)
Preceding gene: 159899046
Following gene: 159899048
Centisome position: 50.95
GC content: 47.48
Gene sequence:
>1011_bases ATGGAACTAATTGAACGTTATCTTGCAGCAGTTAGCAATTATTTACCTGCAAAACAACGCAGCGATATTTTGGATGAGCT ACGTTCTTCGATCTATGATAGCCTTGAGCGCAACGATCAAGCGCTCGACGATGAAGCGGCTGTTGTCGCAACCCTACAAG CGCTGGGCGAGCCAGCCAAAGTAGCGGCGGCGTATGGTAACAACCAACAATATTTGATCAGTCCAGCACTGTTTCCACAA TTTCGATCGGTGGTGTTGCTGGTATTTAGCATTATTATCGTTAGTCAGCTTGGTTTAGCCCTGCTGGCAACGATCGGCAA TTATCACCTGAATATTGTCCAAGTTGCCTGGAACGCCATCAGCAATCTGCCAGCAACCTTTGGCTTGATTGTCGCGATTT TCTGGGGCGTACAAAAGCTTGAAATTGAGGCCGAAACTGAGCCGAAAAAGCCGTTCGACCCACGCAAATTGCCAGCAATT ACTCTCGCTAACGAGAAAATTAGCCGTAGTTCGCAACTGATTGGGATTGCAGTTCAGGTTATTTTGTTGGGCTGGCTGAT GCAATTTCAGGCCGAAGGCGGCTTCCGCTGGGTTGATGGCAGTGGCTTGTTTGAAAACCCAGTGATTAGTCAATATTTTG CCTTGGTGGTCGTTGCCAGTATTTTCAATGTGGTCGTTGATCTGATTGTGATGTGGCGTGGAGTTTGGCAAACCAGCACC CGTATCGCCTCACTAGCCGCCAGTGGCTTTAGTTTAATTGTGTTGTTCCTGTTGATTCGCGGCCATGCTGCCTGGCTGAC CAACGCAGGCTATCCCAATTCATTACGTCAACTAATCCGCCTTGGTGAGCTAATTCGCGAAAATAACCCGGCAATTGGCA TGAGTTCGTTCTATTATGGCTTATCAATCACCGCCTTTTTCGTAATTATCGACGCAGGCTACACGGCTTACAAGCTGTAC CAAGAGCGTAGCCAAGCCAAATATAACAACAATATTGCTCCAGCAAGCTAA
Upstream 100 bases:
>100_bases ATTAACCAAGCAGGTCGCACCCTGCTAGCCCAATTGAGCCACGATTGGCAAAGTCTAGCCGAAGTCATGCAACGCTTATT AACCAATGAAGGAGCTTGAG
Downstream 100 bases:
>100_bases ACAGCGCAAGCCAACTTTGTGGCATAATCAGCGCAGATGAGTTTTTCAGCTGAGGAACGCTGCATGTCGCGTGAGTATCC AAATCAACCACTAATTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MELIERYLAAVSNYLPAKQRSDILDELRSSIYDSLERNDQALDDEAAVVATLQALGEPAKVAAAYGNNQQYLISPALFPQ FRSVVLLVFSIIIVSQLGLALLATIGNYHLNIVQVAWNAISNLPATFGLIVAIFWGVQKLEIEAETEPKKPFDPRKLPAI TLANEKISRSSQLIGIAVQVILLGWLMQFQAEGGFRWVDGSGLFENPVISQYFALVVVASIFNVVVDLIVMWRGVWQTST RIASLAASGFSLIVLFLLIRGHAAWLTNAGYPNSLRQLIRLGELIRENNPAIGMSSFYYGLSITAFFVIIDAGYTAYKLY QERSQAKYNNNIAPAS
Sequences:
>Translated_336_residues MELIERYLAAVSNYLPAKQRSDILDELRSSIYDSLERNDQALDDEAAVVATLQALGEPAKVAAAYGNNQQYLISPALFPQ FRSVVLLVFSIIIVSQLGLALLATIGNYHLNIVQVAWNAISNLPATFGLIVAIFWGVQKLEIEAETEPKKPFDPRKLPAI TLANEKISRSSQLIGIAVQVILLGWLMQFQAEGGFRWVDGSGLFENPVISQYFALVVVASIFNVVVDLIVMWRGVWQTST RIASLAASGFSLIVLFLLIRGHAAWLTNAGYPNSLRQLIRLGELIRENNPAIGMSSFYYGLSITAFFVIIDAGYTAYKLY QERSQAKYNNNIAPAS >Mature_336_residues MELIERYLAAVSNYLPAKQRSDILDELRSSIYDSLERNDQALDDEAAVVATLQALGEPAKVAAAYGNNQQYLISPALFPQ FRSVVLLVFSIIIVSQLGLALLATIGNYHLNIVQVAWNAISNLPATFGLIVAIFWGVQKLEIEAETEPKKPFDPRKLPAI TLANEKISRSSQLIGIAVQVILLGWLMQFQAEGGFRWVDGSGLFENPVISQYFALVVVASIFNVVVDLIVMWRGVWQTST RIASLAASGFSLIVLFLLIRGHAAWLTNAGYPNSLRQLIRLGELIRENNPAIGMSSFYYGLSITAFFVIIDAGYTAYKLY QERSQAKYNNNIAPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37122; Mature: 37122
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIERYLAAVSNYLPAKQRSDILDELRSSIYDSLERNDQALDDEAAVVATLQALGEPAK CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH VAAAYGNNQQYLISPALFPQFRSVVLLVFSIIIVSQLGLALLATIGNYHLNIVQVAWNAI HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SNLPATFGLIVAIFWGVQKLEIEAETEPKKPFDPRKLPAITLANEKISRSSQLIGIAVQV HCCCHHHHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH ILLGWLMQFQAEGGFRWVDGSGLFENPVISQYFALVVVASIFNVVVDLIVMWRGVWQTST HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIASLAASGFSLIVLFLLIRGHAAWLTNAGYPNSLRQLIRLGELIRENNPAIGMSSFYYG HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSITAFFVIIDAGYTAYKLYQERSQAKYNNNIAPAS HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MELIERYLAAVSNYLPAKQRSDILDELRSSIYDSLERNDQALDDEAAVVATLQALGEPAK CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH VAAAYGNNQQYLISPALFPQFRSVVLLVFSIIIVSQLGLALLATIGNYHLNIVQVAWNAI HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SNLPATFGLIVAIFWGVQKLEIEAETEPKKPFDPRKLPAITLANEKISRSSQLIGIAVQV HCCCHHHHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH ILLGWLMQFQAEGGFRWVDGSGLFENPVISQYFALVVVASIFNVVVDLIVMWRGVWQTST HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIASLAASGFSLIVLFLLIRGHAAWLTNAGYPNSLRQLIRLGELIRENNPAIGMSSFYYG HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSITAFFVIIDAGYTAYKLYQERSQAKYNNNIAPAS HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA