Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is yfaO [C]

Identifier: 159899048

GI number: 159899048

Start: 3234363

End: 3234794

Strand: Direct

Name: yfaO [C]

Synonym: Haur_2529

Alternate gene names: 159899048

Gene position: 3234363-3234794 (Clockwise)

Preceding gene: 159899047

Following gene: 159899052

Centisome position: 50.96

GC content: 54.17

Gene sequence:

>432_bases
ATGTCGCGTGAGTATCCAAATCAACCACTAATTGGCGTAGCCGTGATGGTTTGGCACAAACAACAAGTGCTGTTGGTGCA
ACGAGCCAAGGAGCCATTGGCTGGCCAGTGGAGCGTTCCAGGTGGAGCAATCGAGTTGGGTGAAACGGTCGAGGCCGCTG
CCCGCCGCGAAATTCGCGAAGAATGTAGCGTTGAAATCAGCCAGCCACGCTTTATCACCGCCGTCGATGTGATTCATCGC
GATCAAACGGATCAGGTGCAATATCATTATGTCTTGTTGGAGATGCAGGCCGAGTGGCTAAGCGGCGAACCACAGGCAGG
CGATGATGCGCTTGCGATTGCTTGGTTTGGGGTTGACGATCTTATAGGCCTCGATATTCACCCTGAAACCCGATGGCTGG
TCGAAACTGTCGCCGCCCAACGCCTCGATTAA

Upstream 100 bases:

>100_bases
AGCCAAATATAACAACAATATTGCTCCAGCAAGCTAAACAGCGCAAGCCAACTTTGTGGCATAATCAGCGCAGATGAGTT
TTTCAGCTGAGGAACGCTGC

Downstream 100 bases:

>100_bases
AGCGAAAACCCCCGTTGGATTAGCTCAACGGGGGTTTTGCAATCTAGAAATAGCCTAATTCATCTTTGGCATCTTGGCTC
ATCATTTCGGGGTTCCAAAA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-Ribose Pyrophosphatase; Nudix Hydrolase; Hydrolase NUDIX Family; MutT-Like Protein; NUDIX Family Hydrolase; Hydrolase Nudix Family; MutT/NUCliX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; ADP-Ribose Phosphohydrolase; MutT/Nudix Family Protein; MutT/Nudix Family Phosphohydrolase; NUDIX Domain-Containing; Hydrolase; MutT Family Protein

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSREYPNQPLIGVAVMVWHKQQVLLVQRAKEPLAGQWSVPGGAIELGETVEAAARREIREECSVEISQPRFITAVDVIHR
DQTDQVQYHYVLLEMQAEWLSGEPQAGDDALAIAWFGVDDLIGLDIHPETRWLVETVAAQRLD

Sequences:

>Translated_143_residues
MSREYPNQPLIGVAVMVWHKQQVLLVQRAKEPLAGQWSVPGGAIELGETVEAAARREIREECSVEISQPRFITAVDVIHR
DQTDQVQYHYVLLEMQAEWLSGEPQAGDDALAIAWFGVDDLIGLDIHPETRWLVETVAAQRLD
>Mature_142_residues
SREYPNQPLIGVAVMVWHKQQVLLVQRAKEPLAGQWSVPGGAIELGETVEAAARREIREECSVEISQPRFITAVDVIHRD
QTDQVQYHYVLLEMQAEWLSGEPQAGDDALAIAWFGVDDLIGLDIHPETRWLVETVAAQRLD

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 16112; Mature: 15981

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREYPNQPLIGVAVMVWHKQQVLLVQRAKEPLAGQWSVPGGAIELGETVEAAARREIRE
CCCCCCCCCHHEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHH
ECSVEISQPRFITAVDVIHRDQTDQVQYHYVLLEMQAEWLSGEPQAGDDALAIAWFGVDD
HHCEEECCCEEEEEEHHHHCCCCCCEEEEEEEEEEEHHHCCCCCCCCCCEEEEEEECCCC
LIGLDIHPETRWLVETVAAQRLD
EECCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SREYPNQPLIGVAVMVWHKQQVLLVQRAKEPLAGQWSVPGGAIELGETVEAAARREIRE
CCCCCCCCHHEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHH
ECSVEISQPRFITAVDVIHRDQTDQVQYHYVLLEMQAEWLSGEPQAGDDALAIAWFGVDD
HHCEEECCCEEEEEEHHHHCCCCCCEEEEEEEEEEEHHHCCCCCCCCCCEEEEEEECCCC
LIGLDIHPETRWLVETVAAQRLD
EECCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA