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The map label for this gene is ybcY [H]

Identifier: 159899038

GI number: 159899038

Start: 3217192

End: 3217839

Strand: Direct

Name: ybcY [H]

Synonym: Haur_2519

Alternate gene names: 159899038

Gene position: 3217192-3217839 (Clockwise)

Preceding gene: 159899035

Following gene: 159899039

Centisome position: 50.69

GC content: 48.15

Gene sequence:

>648_bases
ATGAGCGATTTACCAGCTAGTGCCCGTATTTACAACAACAACCTTTTAAAGTTCTACGATTTTCTAGTTCATGGCATCTC
CGATAGTTTTATTTGGCGCTGCCCCAAGCCCAATTTAGTTGCATGGTATCGCCAACATCTCGGCAAGCAGCACTTGGATA
TTGGGCCAGGCAGCGGTTTGTTATTGCGCGAAACCCTGAATCAACAACAATTAAGCAAATTGGTGCTGCTCGATGTTAAT
CCTGCGTGCTTAATCCAAGCGTCAGCCAATCTCAGCGAGTGGCAACCACAGGCCGTTCGTGCTTCGATTATGCAAACATT
GCCATTAACTGAGCAGTTCGATTCGATTGGTTTGGGCTATATTGTGCATTGCATCGCTGGCACACCTGACATTAAAGGCG
CAGTGCTACAACGGCTGGCCGAGCTGTTAACTCCCAATGGAGTGCTGTTTGGTGCAACAATTTTAAGCGCTAGCGAACCA
TTTCATAGCGCTACGGCGCGGCGTTTGATGGGTATTTACAATCAGCGCCAAATTTTTGCCAACCAAACCGATACCCTCGC
CAAGCTTGAAACGATGCTGCAACAGGCTTTTCAACTCTATGAGATTAAGCGCATCGGCAGTGTGGCGCTCTTTGCTGGCT
GGCGTTGA

Upstream 100 bases:

>100_bases
GCATAGTGTTCCTCACACATGGAAACGTTTTTATTAGTTATTTTTTAGCAGAAATTTGTTAAGATGCAATTGAAAGTTTT
AGGTGTTTTGGGAGCAATTA

Downstream 100 bases:

>100_bases
TCGTTGATCCAACTCAACCAACTCAGAACCCCCCCAAATCAAAAAGCCCCTCGCCCGCTCCTTGGGTAACAAGTTCTTAT
ACTGGTTATTATGCTTCGAA

Product: type 12 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSDLPASARIYNNNLLKFYDFLVHGISDSFIWRCPKPNLVAWYRQHLGKQHLDIGPGSGLLLRETLNQQQLSKLVLLDVN
PACLIQASANLSEWQPQAVRASIMQTLPLTEQFDSIGLGYIVHCIAGTPDIKGAVLQRLAELLTPNGVLFGATILSASEP
FHSATARRLMGIYNQRQIFANQTDTLAKLETMLQQAFQLYEIKRIGSVALFAGWR

Sequences:

>Translated_215_residues
MSDLPASARIYNNNLLKFYDFLVHGISDSFIWRCPKPNLVAWYRQHLGKQHLDIGPGSGLLLRETLNQQQLSKLVLLDVN
PACLIQASANLSEWQPQAVRASIMQTLPLTEQFDSIGLGYIVHCIAGTPDIKGAVLQRLAELLTPNGVLFGATILSASEP
FHSATARRLMGIYNQRQIFANQTDTLAKLETMLQQAFQLYEIKRIGSVALFAGWR
>Mature_214_residues
SDLPASARIYNNNLLKFYDFLVHGISDSFIWRCPKPNLVAWYRQHLGKQHLDIGPGSGLLLRETLNQQQLSKLVLLDVNP
ACLIQASANLSEWQPQAVRASIMQTLPLTEQFDSIGLGYIVHCIAGTPDIKGAVLQRLAELLTPNGVLFGATILSASEPF
HSATARRLMGIYNQRQIFANQTDTLAKLETMLQQAFQLYEIKRIGSVALFAGWR

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016584 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 23978; Mature: 23847

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLPASARIYNNNLLKFYDFLVHGISDSFIWRCPKPNLVAWYRQHLGKQHLDIGPGSGL
CCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
LLRETLNQQQLSKLVLLDVNPACLIQASANLSEWQPQAVRASIMQTLPLTEQFDSIGLGY
HHHHHCCHHHHHHEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHH
IVHCIAGTPDIKGAVLQRLAELLTPNGVLFGATILSASEPFHSATARRLMGIYNQRQIFA
HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
NQTDTLAKLETMLQQAFQLYEIKRIGSVALFAGWR
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
>Mature Secondary Structure 
SDLPASARIYNNNLLKFYDFLVHGISDSFIWRCPKPNLVAWYRQHLGKQHLDIGPGSGL
CCCCCCCEEECCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
LLRETLNQQQLSKLVLLDVNPACLIQASANLSEWQPQAVRASIMQTLPLTEQFDSIGLGY
HHHHHCCHHHHHHEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHH
IVHCIAGTPDIKGAVLQRLAELLTPNGVLFGATILSASEPFHSATARRLMGIYNQRQIFA
HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
NQTDTLAKLETMLQQAFQLYEIKRIGSVALFAGWR
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]