Click here to switch to the map view.

The map label for this gene is ooxA [H]

Identifier: 159899021

GI number: 159899021

Start: 3196050

End: 3197276

Strand: Direct

Name: ooxA [H]

Synonym: Haur_2502

Alternate gene names: 159899021

Gene position: 3196050-3197276 (Clockwise)

Preceding gene: 159899020

Following gene: 159899022

Centisome position: 50.36

GC content: 52.16

Gene sequence:

>1227_bases
GTGAGCCTTAATGTCGTGATCGTTGGCGCTGGACCAGCCGGATTAGCCGCAGCTTGGAGCGCCAGCCAAAGCAACGCCAA
CATTACGCTGATCGATCAAGCTGCTCAGGCTGGGGGCCAGATTTGGCGCGGTGGTCAAGGTTATGCGCCCAAGCGTTATC
GACATTTGTTTGGTCAACAGACCACACTGCATTATCGCAAACAAACCCACGTACTTGGCGCAAGCGAGCAACAATTGTAT
TTAGCCACCCCCCAAGGGCCGCAACAACTACGCTACGATCGGCTGATTTTGGCCAACGGCGCACGCGAATTGTTCTTGCC
ATTTCCAGGCTGGACGTTGCCCAAAGTGGTGGGCGTAGGTGGCTTGCAAGCGTTGGTCAAGGGTAGCTTGCCAATTGCTG
GCAAACGAGTGGTGATTGCTGGCAGCGGGCCGTTGTTAATTGCAGTTGCCAGCCAATTAAAGCAGCGTGGCGCAATCATC
AAAGCCGTGGTTGAACAAGTACCGATCGCTCAGCTTTTGCGCTTTGGGCGTAGCTTGGTTGGCAATCCTACAAAAATGCT
GCAAGCAGCTCAATTTGCACAAGCTTTAGCTAATACGCCGTTTTATGTCAATACATGGATTACAGCGGCTGAGGGTGAGG
GCGAAGTGCAGCAAGTTCAATTAAACAACGGTCAACGGATCGAATGCGATTATTTGGCCTGTAGTTGGGGCTTAATCGCC
AACACCGAACTAGCCCAACAACTTGGTTGTCGCCTTGAGCAAAATTTTGTCGTAGTTGATCGCAGCCAACACACCAGCCG
CGACCAGGTGTATGCAGTTGGCGAATTAACGGGTATTGGCGGCGAAGATAAAGCCGTGATCGAAGGCCAAATTGCTGGGT
TTGTGGCAACTGGCAATTATCAAGCAGCCAGCCAATTAGCGCAGCAGCAGGCCCAAGCTCGGCAATTTAGTCAACAATTA
GCCGCAAGTTTTGCCCTACGCCCCGAATTACGTCAACTTGCCCAAGCCAATACCATTGTTTGTCGTTGCGAAGATGTGAC
ATTGGCGCAATTGCAAAGCCAACCAAGCTGGCGCAGCGCCAAACTACAAACTCGCTGCGGCATGGGCATCTGTCAAGGGC
GGGTGTGTGGCGGGGCAACGCAGTATTTATTTGGTTGGAGTCAAGATAGCGTGCGCTTTCCAATTCATTCGGTCAGCGTC
GCCGATTTAGTTATGGAGTCAGTATGA

Upstream 100 bases:

>100_bases
TGTGGGATGGGCAGTTGTGGCGAGTGCCGCGTGACCATCAATCAGCAAGCGCATCAATTGGCCTGTTTGCTGCAATGTTG
CGACGGCATGGAGGTGGATT

Downstream 100 bases:

>100_bases
GCATGTGGCATGGAGTTATTCCAGCAATCACCACCCGTTTTAATCACGATGGTAGCGTTGATCATGGATTTTTGGCCGAG
CACTGTGCTTGGATGTTGGA

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: trans-transtetradehydroacyl-CoA; NADPH [C]

Alternate protein names: Octopine oxidase subunit A [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSLNVVIVGAGPAGLAAAWSASQSNANITLIDQAAQAGGQIWRGGQGYAPKRYRHLFGQQTTLHYRKQTHVLGASEQQLY
LATPQGPQQLRYDRLILANGARELFLPFPGWTLPKVVGVGGLQALVKGSLPIAGKRVVIAGSGPLLIAVASQLKQRGAII
KAVVEQVPIAQLLRFGRSLVGNPTKMLQAAQFAQALANTPFYVNTWITAAEGEGEVQQVQLNNGQRIECDYLACSWGLIA
NTELAQQLGCRLEQNFVVVDRSQHTSRDQVYAVGELTGIGGEDKAVIEGQIAGFVATGNYQAASQLAQQQAQARQFSQQL
AASFALRPELRQLAQANTIVCRCEDVTLAQLQSQPSWRSAKLQTRCGMGICQGRVCGGATQYLFGWSQDSVRFPIHSVSV
ADLVMESV

Sequences:

>Translated_408_residues
MSLNVVIVGAGPAGLAAAWSASQSNANITLIDQAAQAGGQIWRGGQGYAPKRYRHLFGQQTTLHYRKQTHVLGASEQQLY
LATPQGPQQLRYDRLILANGARELFLPFPGWTLPKVVGVGGLQALVKGSLPIAGKRVVIAGSGPLLIAVASQLKQRGAII
KAVVEQVPIAQLLRFGRSLVGNPTKMLQAAQFAQALANTPFYVNTWITAAEGEGEVQQVQLNNGQRIECDYLACSWGLIA
NTELAQQLGCRLEQNFVVVDRSQHTSRDQVYAVGELTGIGGEDKAVIEGQIAGFVATGNYQAASQLAQQQAQARQFSQQL
AASFALRPELRQLAQANTIVCRCEDVTLAQLQSQPSWRSAKLQTRCGMGICQGRVCGGATQYLFGWSQDSVRFPIHSVSV
ADLVMESV
>Mature_407_residues
SLNVVIVGAGPAGLAAAWSASQSNANITLIDQAAQAGGQIWRGGQGYAPKRYRHLFGQQTTLHYRKQTHVLGASEQQLYL
ATPQGPQQLRYDRLILANGARELFLPFPGWTLPKVVGVGGLQALVKGSLPIAGKRVVIAGSGPLLIAVASQLKQRGAIIK
AVVEQVPIAQLLRFGRSLVGNPTKMLQAAQFAQALANTPFYVNTWITAAEGEGEVQQVQLNNGQRIECDYLACSWGLIAN
TELAQQLGCRLEQNFVVVDRSQHTSRDQVYAVGELTGIGGEDKAVIEGQIAGFVATGNYQAASQLAQQQAQARQFSQQLA
ASFALRPELRQLAQANTIVCRCEDVTLAQLQSQPSWRSAKLQTRCGMGICQGRVCGGATQYLFGWSQDSVRFPIHSVSVA
DLVMESV

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To T-protein and to dimethylglycine dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419
- InterPro:   IPR013027
- InterPro:   IPR017224
- InterPro:   IPR000103 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF07992 Pyr_redox_2 [H]

EC number: 1.3.1.34 [C]

Molecular weight: Translated: 43895; Mature: 43764

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNVVIVGAGPAGLAAAWSASQSNANITLIDQAAQAGGQIWRGGQGYAPKRYRHLFGQQ
CCEEEEEEECCCCCHHHEECCCCCCCCEEEEECHHHCCCCEEECCCCCCCHHHHHHHCCC
TTLHYRKQTHVLGASEQQLYLATPQGPQQLRYDRLILANGARELFLPFPGWTLPKVVGVG
CEEEEHHHHEEECCCCCEEEEECCCCHHHHHHCEEEEECCCCEEEEECCCCCHHHHHCCC
GLQALVKGSLPIAGKRVVIAGSGPLLIAVASQLKQRGAIIKAVVEQVPIAQLLRFGRSLV
HHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHH
GNPTKMLQAAQFAQALANTPFYVNTWITAAEGEGEVQQVQLNNGQRIECDYLACSWGLIA
CCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCEE
NTELAQQLGCRLEQNFVVVDRSQHTSRDQVYAVGELTGIGGEDKAVIEGQIAGFVATGNY
CHHHHHHHCCEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCH
QAASQLAQQQAQARQFSQQLAASFALRPELRQLAQANTIVCRCEDVTLAQLQSQPSWRSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCC
KLQTRCGMGICQGRVCGGATQYLFGWSQDSVRFPIHSVSVADLVMESV
HHHHHCCCCCCCCCCCCCCHHHEEECCCCCEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SLNVVIVGAGPAGLAAAWSASQSNANITLIDQAAQAGGQIWRGGQGYAPKRYRHLFGQQ
CEEEEEEECCCCCHHHEECCCCCCCCEEEEECHHHCCCCEEECCCCCCCHHHHHHHCCC
TTLHYRKQTHVLGASEQQLYLATPQGPQQLRYDRLILANGARELFLPFPGWTLPKVVGVG
CEEEEHHHHEEECCCCCEEEEECCCCHHHHHHCEEEEECCCCEEEEECCCCCHHHHHCCC
GLQALVKGSLPIAGKRVVIAGSGPLLIAVASQLKQRGAIIKAVVEQVPIAQLLRFGRSLV
HHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHH
GNPTKMLQAAQFAQALANTPFYVNTWITAAEGEGEVQQVQLNNGQRIECDYLACSWGLIA
CCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCEE
NTELAQQLGCRLEQNFVVVDRSQHTSRDQVYAVGELTGIGGEDKAVIEGQIAGFVATGNY
CHHHHHHHCCEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCH
QAASQLAQQQAQARQFSQQLAASFALRPELRQLAQANTIVCRCEDVTLAQLQSQPSWRSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCC
KLQTRCGMGICQGRVCGGATQYLFGWSQDSVRFPIHSVSVADLVMESV
HHHHHCCCCCCCCCCCCCCHHHEEECCCCCEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: transDidehydroacyl-CoA; NADP+ [C]

Specific reaction: transDidehydroacyl-CoA + NADP+ =trans-transtetradehydroacyl-CoA + NADPH [C]

General reaction: Redox reaction [C]

Inhibitor: Iodoacetic acid; N-Ethyl maleimide [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]