| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is b4286 [C]
Identifier: 159899012
GI number: 159899012
Start: 3186052
End: 3186741
Strand: Reverse
Name: b4286 [C]
Synonym: Haur_2493
Alternate gene names: 159899012
Gene position: 3186741-3186052 (Counterclockwise)
Preceding gene: 159899014
Following gene: 159899011
Centisome position: 50.21
GC content: 53.91
Gene sequence:
>690_bases ATGAAGATCGGAATTATTGGGGCTGGTCAGATTGGCGGAACTCTTGCAGCACAGCTGACCGCACGTGGTCACCAAGTGGT GATTGCCAATTCACGCGGGCCGGAAAGTATTCGTGAGTTGGCCGAAGCAGGTGGTTTTCAGGCCGTTACGGTTGCTGAGG CAGCCCGTAGTGGCGAAGTCGTCATTATTACGATTCCCCAGCGAGCAGTGCTGGATTTGCCCAAGGATCTCTTTGCTGGA GTCTCAGAAACTGTGGTGGTTGTCGATACTGGCAATTATTATCCTGTGCGTGATGGACAAATCGCTGCTATCGAGGATGG GCAAATTGAGAGTGTCTGGGTTGCTGAGCATTTAGGCCGTCCAGTGGTTAAGGCTTTTAACAATATTACTGCCCAAAGCC TGCGTGAAAAAGGTCGCCCAAAAGCGGCCTCAGATCGAATTGCGCTTTCGGTTGCTGGCGATTCTCCAGCAGCGCGAGCA ACAGTGCTGGGACTAGTCGATGAACTTGGGTTTGATCCAGTCGATGCTGGGAGTTTGGCCGATTCGTGGCGGCAGCAGCC AGGAACCCCGGCGTATATTGCCGACCTCGACGTGCCGCGCTTGCAGGCAGCTCTTGCTGCCGCCGACCAAACGCGGATTG CAGAATATCGCTTTGCTGCCAATGAACAAGTGCGAGCCTTTTTCGAGTAA
Upstream 100 bases:
>100_bases AAGTAATGTGATAATCGGCACAGGCAATTGATGCGTGGTATGCTTTTTTTGTAACTAGATTGCGCCGCCGTTGAGTGGTT GCGCAGCTATGAGGAGCTGT
Downstream 100 bases:
>100_bases CCGCATGATCAGCAAATATCATCGAATATAAAACATATGTTCTGAAATATGCAGTTTGCCCGCCCGCAAATGGCTCGTAC AATCGAGTCATTTGTGGTTT
Product: NADP oxidoreductase coenzyme F420-dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKIGIIGAGQIGGTLAAQLTARGHQVVIANSRGPESIRELAEAGGFQAVTVAEAARSGEVVIITIPQRAVLDLPKDLFAG VSETVVVVDTGNYYPVRDGQIAAIEDGQIESVWVAEHLGRPVVKAFNNITAQSLREKGRPKAASDRIALSVAGDSPAARA TVLGLVDELGFDPVDAGSLADSWRQQPGTPAYIADLDVPRLQAALAAADQTRIAEYRFAANEQVRAFFE
Sequences:
>Translated_229_residues MKIGIIGAGQIGGTLAAQLTARGHQVVIANSRGPESIRELAEAGGFQAVTVAEAARSGEVVIITIPQRAVLDLPKDLFAG VSETVVVVDTGNYYPVRDGQIAAIEDGQIESVWVAEHLGRPVVKAFNNITAQSLREKGRPKAASDRIALSVAGDSPAARA TVLGLVDELGFDPVDAGSLADSWRQQPGTPAYIADLDVPRLQAALAAADQTRIAEYRFAANEQVRAFFE >Mature_229_residues MKIGIIGAGQIGGTLAAQLTARGHQVVIANSRGPESIRELAEAGGFQAVTVAEAARSGEVVIITIPQRAVLDLPKDLFAG VSETVVVVDTGNYYPVRDGQIAAIEDGQIESVWVAEHLGRPVVKAFNNITAQSLREKGRPKAASDRIALSVAGDSPAARA TVLGLVDELGFDPVDAGSLADSWRQQPGTPAYIADLDVPRLQAALAAADQTRIAEYRFAANEQVRAFFE
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24111; Mature: 24111
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIIGAGQIGGTLAAQLTARGHQVVIANSRGPESIRELAEAGGFQAVTVAEAARSGEV CEEEEEECCCCCCHHHHHEECCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEHHHCCCCE VIITIPQRAVLDLPKDLFAGVSETVVVVDTGNYYPVRDGQIAAIEDGQIESVWVAEHLGR EEEECCCHHHHCCCHHHHCCCCCEEEEEECCCEEECCCCEEEEECCCCCEEEHHHHHCCC PVVKAFNNITAQSLREKGRPKAASDRIALSVAGDSPAARATVLGLVDELGFDPVDAGSLA HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHH DSWRQQPGTPAYIADLDVPRLQAALAAADQTRIAEYRFAANEQVRAFFE HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEECC >Mature Secondary Structure MKIGIIGAGQIGGTLAAQLTARGHQVVIANSRGPESIRELAEAGGFQAVTVAEAARSGEV CEEEEEECCCCCCHHHHHEECCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEHHHCCCCE VIITIPQRAVLDLPKDLFAGVSETVVVVDTGNYYPVRDGQIAAIEDGQIESVWVAEHLGR EEEECCCHHHHCCCHHHHCCCCCEEEEEECCCEEECCCCEEEEECCCCCEEEHHHHHCCC PVVKAFNNITAQSLREKGRPKAASDRIALSVAGDSPAARATVLGLVDELGFDPVDAGSLA HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHH DSWRQQPGTPAYIADLDVPRLQAALAAADQTRIAEYRFAANEQVRAFFE HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]