| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899011
Identifier: 159899011
GI number: 159899011
Start: 3185320
End: 3185826
Strand: Reverse
Name: 159899011
Synonym: Haur_2492
Alternate gene names: NA
Gene position: 3185826-3185320 (Counterclockwise)
Preceding gene: 159899012
Following gene: 159899009
Centisome position: 50.2
GC content: 51.08
Gene sequence:
>507_bases ATGGAGAGCATCTGGAAGACGAGTGTTTGGCAGCAATTTGGGGCGGCAATTGCCATGCTTGAAGACCCGATTGTTCGTTG CCCCGACCAGCTCTGGACGAGCGTTTTATGGGAAGATCCTGATGATCCGCGTTATGGGCATTTCTGGTTTGTGGCCTATC ACAGCTTGTTCTGGCTGGATCTCTTTTTGACTGGTTCGAGTGAGGGGTTTAAGCCACCAGCGCCATTTGTTCGTGGTAGT TTGCCAGATCAGCCGTATAGCAAAGCGCAAGTGCTGGCCTATCTACACGATTGTCGCCAGCGCTGCAAGGCAACGATTAT GGGTTTGACCGATGCAAAGGCCCAAGAGCGCTGTATTTTTGAATGGATGCAACCAAGTTTTTTTGAACTTCAGCTCTATA GCATGCGCCATGTGCAAGAGCATGCCGCCCAATTGAGTTTAGCGCTGGGCCAGCAGGGCATTGCAGGCGCTGATTGGATT GCTCAGGCTATTGACAACGATTTGTGA
Upstream 100 bases:
>100_bases TGGCTATAAGCGTTGATTGTGTGATGGCTAAGATTTGCTAGACAGCCCGCATCCTGATTGCTACACTGCGGTCACGACTG TTTTTTACAGGAGGCGCATG
Downstream 100 bases:
>100_bases GTACTGTTATTTAATATGGTCAATGATATGAATTTGTTTCAATAGTCCTTAGAATAAAGGAGGGTCGTACCTGTAAACTT ATAGGTACGACCCTCCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MESIWKTSVWQQFGAAIAMLEDPIVRCPDQLWTSVLWEDPDDPRYGHFWFVAYHSLFWLDLFLTGSSEGFKPPAPFVRGS LPDQPYSKAQVLAYLHDCRQRCKATIMGLTDAKAQERCIFEWMQPSFFELQLYSMRHVQEHAAQLSLALGQQGIAGADWI AQAIDNDL
Sequences:
>Translated_168_residues MESIWKTSVWQQFGAAIAMLEDPIVRCPDQLWTSVLWEDPDDPRYGHFWFVAYHSLFWLDLFLTGSSEGFKPPAPFVRGS LPDQPYSKAQVLAYLHDCRQRCKATIMGLTDAKAQERCIFEWMQPSFFELQLYSMRHVQEHAAQLSLALGQQGIAGADWI AQAIDNDL >Mature_168_residues MESIWKTSVWQQFGAAIAMLEDPIVRCPDQLWTSVLWEDPDDPRYGHFWFVAYHSLFWLDLFLTGSSEGFKPPAPFVRGS LPDQPYSKAQVLAYLHDCRQRCKATIMGLTDAKAQERCIFEWMQPSFFELQLYSMRHVQEHAAQLSLALGQQGIAGADWI AQAIDNDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19285; Mature: 19285
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESIWKTSVWQQFGAAIAMLEDPIVRCPDQLWTSVLWEDPDDPRYGHFWFVAYHSLFWLD CCCHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LFLTGSSEGFKPPAPFVRGSLPDQPYSKAQVLAYLHDCRQRCKATIMGLTDAKAQERCIF HHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EWMQPSFFELQLYSMRHVQEHAAQLSLALGQQGIAGADWIAQAIDNDL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MESIWKTSVWQQFGAAIAMLEDPIVRCPDQLWTSVLWEDPDDPRYGHFWFVAYHSLFWLD CCCHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LFLTGSSEGFKPPAPFVRGSLPDQPYSKAQVLAYLHDCRQRCKATIMGLTDAKAQERCIF HHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EWMQPSFFELQLYSMRHVQEHAAQLSLALGQQGIAGADWIAQAIDNDL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA