Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899006

Identifier: 159899006

GI number: 159899006

Start: 3179460

End: 3180464

Strand: Reverse

Name: 159899006

Synonym: Haur_2487

Alternate gene names: NA

Gene position: 3180464-3179460 (Counterclockwise)

Preceding gene: 159899007

Following gene: 159899005

Centisome position: 50.11

GC content: 54.83

Gene sequence:

>1005_bases
GTGTATAACGTTGGCTGGCGGGCATTGTCGTATCGTGATAACACCCGCGTAGATTGGCGCTTGGGTAGTGATCGTCCGCT
GTTGACCCATGTCTGGTATCCGTGTGATCCGGCTGTACCGCAGATGCCTATGGTGATCGGCCCACCAGATAATCCGCTCT
TTAATGCTGGTGATGCAGCACCCGATGCCCCGATGCTAGAAGGTCAATTTCCTCTTATCTTGCTATCTCATGGAACGGGT
GGGATTGCCATGCAGTTTGGGTGGCTCGCTCGCGTGCTGGCGGCTCATGGCTACATCGTTGCTGGTGTCAATCACCACGG
GAATACAGGCCTTGAAACCTATATAGTTGAAGGCTTTACACGGGTTTGGGAACGTCCGCGCGACCTGAGCGCTGTCCTTG
ATTGTCTGCTCGATGACCCAAACTTCGGTCCAGCTATCGACCAAGCACGGATCGGGGCAGCAGGATTTTCACTTGGTGGC
TACACTGTTTTGGCGCTTGGTGGTGCTCTGCTCGACTTAAGTTCGCTCGTAGCTGCCTATACCAATGCGGGTCGGCCCTT
GGCCTCAATTGCTCCCCCCGAATTTCCTGACGCGGATGCCGTGGCTCGGCAGCTTGAAGTGTTTGCGGGACACGATGAAC
ATCGTCAATCGTATCGCGATGAGCGCGTTCGCGCTGGTTTTGTCTTGGCACCAGCGCTTGGCGAAGCATTCAAGCCTGAT
GGATTGGCGGCGGTGGCTATTCCCGTTATGATCATCGCTGGCGAAGCAGATACAAATACACCGCCCGCTGTTAATGCGCA
ACGGTACGCTATGCACATCGAGGATGCGGCATTAACGTTGCTCGAAGGGCTGGTTGGGCATTATGTGTTCTTGGCTGAAT
GTACCGAAGCCGGGTGTCGTCTGATCCCAGAACTATGTCTTGATGCACCAGGAGTTGAGCGGAAAGCGATTCAGCAGCAA
GCGAGTACATTGGCACTGAACTTCTTTGAGCGGCATCTCCGCTGA

Upstream 100 bases:

>100_bases
CTCGTATTCTGGAATGGTTTGATTTGTATCCGTGACGTTGGCTCCTTGCATTCGATGCGTTAATGCAACAAGCTAGATCT
CCCACGAAAGGAAGGATAGA

Downstream 100 bases:

>100_bases
ATCCTCTTCGCTAAACAGAGATTGATAATCACTGGAAACAAGTGCACGCGGGAAATTCTCACATGCACTTAGTATTTTAG
GATGGTGCTAACCAATGAGC

Product: putative lipoprotein signal peptide

Products: NA

Alternate protein names: Dienelactone Hydrolase; Dienelactone Hydrolase-Like Protein; Hydrolase Putative Exported Protein; Lipoprotein; Alpha/Beta Hydrolase; Dienelactone Hydrolase-Like; Acyl Transferase Hydrolase; Dienelactone Hydrolase Protein

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAAPDAPMLEGQFPLILLSHGTG
GIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFTRVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGG
YTVLALGGALLDLSSLVAAYTNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD
GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCRLIPELCLDAPGVERKAIQQQ
ASTLALNFFERHLR

Sequences:

>Translated_334_residues
MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAAPDAPMLEGQFPLILLSHGTG
GIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFTRVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGG
YTVLALGGALLDLSSLVAAYTNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD
GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCRLIPELCLDAPGVERKAIQQQ
ASTLALNFFERHLR
>Mature_334_residues
MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAAPDAPMLEGQFPLILLSHGTG
GIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFTRVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGG
YTVLALGGALLDLSSLVAAYTNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD
GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCRLIPELCLDAPGVERKAIQQQ
ASTLALNFFERHLR

Specific function: Unknown

COG id: COG4188

COG function: function code R; Predicted dienelactone hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35984; Mature: 35984

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAA
CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC
PDAPMLEGQFPLILLSHGTGGIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFT
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH
RVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGGYTVLALGGALLDLSSLVAAY
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD
HCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECHHCCCCCCC
GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCR
CHHHEEEEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPELCLDAPGVERKAIQQQASTLALNFFERHLR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAA
CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC
PDAPMLEGQFPLILLSHGTGGIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFT
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH
RVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGGYTVLALGGALLDLSSLVAAY
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD
HCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECHHCCCCCCC
GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCR
CHHHEEEEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPELCLDAPGVERKAIQQQASTLALNFFERHLR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA