| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899006
Identifier: 159899006
GI number: 159899006
Start: 3179460
End: 3180464
Strand: Reverse
Name: 159899006
Synonym: Haur_2487
Alternate gene names: NA
Gene position: 3180464-3179460 (Counterclockwise)
Preceding gene: 159899007
Following gene: 159899005
Centisome position: 50.11
GC content: 54.83
Gene sequence:
>1005_bases GTGTATAACGTTGGCTGGCGGGCATTGTCGTATCGTGATAACACCCGCGTAGATTGGCGCTTGGGTAGTGATCGTCCGCT GTTGACCCATGTCTGGTATCCGTGTGATCCGGCTGTACCGCAGATGCCTATGGTGATCGGCCCACCAGATAATCCGCTCT TTAATGCTGGTGATGCAGCACCCGATGCCCCGATGCTAGAAGGTCAATTTCCTCTTATCTTGCTATCTCATGGAACGGGT GGGATTGCCATGCAGTTTGGGTGGCTCGCTCGCGTGCTGGCGGCTCATGGCTACATCGTTGCTGGTGTCAATCACCACGG GAATACAGGCCTTGAAACCTATATAGTTGAAGGCTTTACACGGGTTTGGGAACGTCCGCGCGACCTGAGCGCTGTCCTTG ATTGTCTGCTCGATGACCCAAACTTCGGTCCAGCTATCGACCAAGCACGGATCGGGGCAGCAGGATTTTCACTTGGTGGC TACACTGTTTTGGCGCTTGGTGGTGCTCTGCTCGACTTAAGTTCGCTCGTAGCTGCCTATACCAATGCGGGTCGGCCCTT GGCCTCAATTGCTCCCCCCGAATTTCCTGACGCGGATGCCGTGGCTCGGCAGCTTGAAGTGTTTGCGGGACACGATGAAC ATCGTCAATCGTATCGCGATGAGCGCGTTCGCGCTGGTTTTGTCTTGGCACCAGCGCTTGGCGAAGCATTCAAGCCTGAT GGATTGGCGGCGGTGGCTATTCCCGTTATGATCATCGCTGGCGAAGCAGATACAAATACACCGCCCGCTGTTAATGCGCA ACGGTACGCTATGCACATCGAGGATGCGGCATTAACGTTGCTCGAAGGGCTGGTTGGGCATTATGTGTTCTTGGCTGAAT GTACCGAAGCCGGGTGTCGTCTGATCCCAGAACTATGTCTTGATGCACCAGGAGTTGAGCGGAAAGCGATTCAGCAGCAA GCGAGTACATTGGCACTGAACTTCTTTGAGCGGCATCTCCGCTGA
Upstream 100 bases:
>100_bases CTCGTATTCTGGAATGGTTTGATTTGTATCCGTGACGTTGGCTCCTTGCATTCGATGCGTTAATGCAACAAGCTAGATCT CCCACGAAAGGAAGGATAGA
Downstream 100 bases:
>100_bases ATCCTCTTCGCTAAACAGAGATTGATAATCACTGGAAACAAGTGCACGCGGGAAATTCTCACATGCACTTAGTATTTTAG GATGGTGCTAACCAATGAGC
Product: putative lipoprotein signal peptide
Products: NA
Alternate protein names: Dienelactone Hydrolase; Dienelactone Hydrolase-Like Protein; Hydrolase Putative Exported Protein; Lipoprotein; Alpha/Beta Hydrolase; Dienelactone Hydrolase-Like; Acyl Transferase Hydrolase; Dienelactone Hydrolase Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAAPDAPMLEGQFPLILLSHGTG GIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFTRVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGG YTVLALGGALLDLSSLVAAYTNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCRLIPELCLDAPGVERKAIQQQ ASTLALNFFERHLR
Sequences:
>Translated_334_residues MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAAPDAPMLEGQFPLILLSHGTG GIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFTRVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGG YTVLALGGALLDLSSLVAAYTNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCRLIPELCLDAPGVERKAIQQQ ASTLALNFFERHLR >Mature_334_residues MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAAPDAPMLEGQFPLILLSHGTG GIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFTRVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGG YTVLALGGALLDLSSLVAAYTNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCRLIPELCLDAPGVERKAIQQQ ASTLALNFFERHLR
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35984; Mature: 35984
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAA CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC PDAPMLEGQFPLILLSHGTGGIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFT CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH RVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGGYTVLALGGALLDLSSLVAAY HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD HCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECHHCCCCCCC GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCR CHHHEEEEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPELCLDAPGVERKAIQQQASTLALNFFERHLR HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYNVGWRALSYRDNTRVDWRLGSDRPLLTHVWYPCDPAVPQMPMVIGPPDNPLFNAGDAA CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC PDAPMLEGQFPLILLSHGTGGIAMQFGWLARVLAAHGYIVAGVNHHGNTGLETYIVEGFT CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH RVWERPRDLSAVLDCLLDDPNFGPAIDQARIGAAGFSLGGYTVLALGGALLDLSSLVAAY HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TNAGRPLASIAPPEFPDADAVARQLEVFAGHDEHRQSYRDERVRAGFVLAPALGEAFKPD HCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECHHCCCCCCC GLAAVAIPVMIIAGEADTNTPPAVNAQRYAMHIEDAALTLLEGLVGHYVFLAECTEAGCR CHHHEEEEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPELCLDAPGVERKAIQQQASTLALNFFERHLR HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA