| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899007
Identifier: 159899007
GI number: 159899007
Start: 3180530
End: 3181243
Strand: Reverse
Name: 159899007
Synonym: Haur_2488
Alternate gene names: NA
Gene position: 3181243-3180530 (Counterclockwise)
Preceding gene: 159899008
Following gene: 159899006
Centisome position: 50.13
GC content: 48.46
Gene sequence:
>714_bases ATGCTGCACTCAGCAACGATGACTAACATTATTGAGCGATTATATCAATGTTTTCGTGGCTACACGATTCCTGATCATCC GACTGGCTGCCCATGTTGTGTGTCTGCCGATGACTACCAGCGTTTGCGTTCGAAACCGCTTCGCCAATTAACCGAGAATG ATCTTTGGCGCTATAGTTTGAAGGCGCTTAATACGTGGGGCGATGAAGACCAATTTCGGGCGATCTTACCACGATGTTTA GAACTGTGCGCTGATAGGTCAAGCTTCTTCGATCGCAGTATGCTGTTTGGTAAACTGCGGCTCGCTGAGTGGCGTACTTG GCCAGAACCAGAACACCAGCTTATTCAAACCTATCTTTGGACGCTCTGGCAAGATTCCCTGAATAGCTTGGATGAATCAG TGGATGAGCTGTTGTGTGCCATTGCCCAAACAGGACTTGATCTCCACCCATTGCTCATGAGCTGGGATACACAGTTACAG ACGCTAATCGGATTAGAGCGATATGCCGACCTTCTTGATCGGCATATGGCCACGATTATTGACCAAAACCGCTTACAGGG CTATGGATGGCCAAATAGTGATGCAACAGCGATTAGTTGGGTGCTTGACCCTACTCGCCGTGAGTGGATGACCACAGCGT TTGCAAATAGCCAGCATGATGACGAAAGTCGGTTGCTGGCTCGTATTCTGGAATGGTTTGATTTGTATCCGTGA
Upstream 100 bases:
>100_bases GAATTTCTATCGGCTCTGTTTTATTCGCTGCCCCGAAGGCATTATTCTTGGGCTTGCTCAGCAGCTCACGTGAGCCGTAG GGTTAGTTGAGTGGAAATGA
Downstream 100 bases:
>100_bases CGTTGGCTCCTTGCATTCGATGCGTTAATGCAACAAGCTAGATCTCCCACGAAAGGAAGGATAGAGTGTATAACGTTGGC TGGCGGGCATTGTCGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLHSATMTNIIERLYQCFRGYTIPDHPTGCPCCVSADDYQRLRSKPLRQLTENDLWRYSLKALNTWGDEDQFRAILPRCL ELCADRSSFFDRSMLFGKLRLAEWRTWPEPEHQLIQTYLWTLWQDSLNSLDESVDELLCAIAQTGLDLHPLLMSWDTQLQ TLIGLERYADLLDRHMATIIDQNRLQGYGWPNSDATAISWVLDPTRREWMTTAFANSQHDDESRLLARILEWFDLYP
Sequences:
>Translated_237_residues MLHSATMTNIIERLYQCFRGYTIPDHPTGCPCCVSADDYQRLRSKPLRQLTENDLWRYSLKALNTWGDEDQFRAILPRCL ELCADRSSFFDRSMLFGKLRLAEWRTWPEPEHQLIQTYLWTLWQDSLNSLDESVDELLCAIAQTGLDLHPLLMSWDTQLQ TLIGLERYADLLDRHMATIIDQNRLQGYGWPNSDATAISWVLDPTRREWMTTAFANSQHDDESRLLARILEWFDLYP >Mature_237_residues MLHSATMTNIIERLYQCFRGYTIPDHPTGCPCCVSADDYQRLRSKPLRQLTENDLWRYSLKALNTWGDEDQFRAILPRCL ELCADRSSFFDRSMLFGKLRLAEWRTWPEPEHQLIQTYLWTLWQDSLNSLDESVDELLCAIAQTGLDLHPLLMSWDTQLQ TLIGLERYADLLDRHMATIIDQNRLQGYGWPNSDATAISWVLDPTRREWMTTAFANSQHDDESRLLARILEWFDLYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27878; Mature: 27878
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHSATMTNIIERLYQCFRGYTIPDHPTGCPCCVSADDYQRLRSKPLRQLTENDLWRYSL CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH KALNTWGDEDQFRAILPRCLELCADRSSFFDRSMLFGKLRLAEWRTWPEPEHQLIQTYLW HHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TLWQDSLNSLDESVDELLCAIAQTGLDLHPLLMSWDTQLQTLIGLERYADLLDRHMATII HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQNRLQGYGWPNSDATAISWVLDPTRREWMTTAFANSQHDDESRLLARILEWFDLYP HHHHHCCCCCCCCCCCEEHEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLHSATMTNIIERLYQCFRGYTIPDHPTGCPCCVSADDYQRLRSKPLRQLTENDLWRYSL CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH KALNTWGDEDQFRAILPRCLELCADRSSFFDRSMLFGKLRLAEWRTWPEPEHQLIQTYLW HHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TLWQDSLNSLDESVDELLCAIAQTGLDLHPLLMSWDTQLQTLIGLERYADLLDRHMATII HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQNRLQGYGWPNSDATAISWVLDPTRREWMTTAFANSQHDDESRLLARILEWFDLYP HHHHHCCCCCCCCCCCEEHEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA