Click here to switch to the map view.

The map label for this gene is ureD

Identifier: 159898974

GI number: 159898974

Start: 3137732

End: 3138595

Strand: Reverse

Name: ureD

Synonym: Haur_2455

Alternate gene names: 159898974

Gene position: 3138595-3137732 (Counterclockwise)

Preceding gene: 159898975

Following gene: 159898973

Centisome position: 49.45

GC content: 53.01

Gene sequence:

>864_bases
ATGCAAACCGCGACCCGCCTTGAGCGTATGCATGGCCATTTGGCGCTCGATTTTACGCTTAAACAGCAGCGTACCCGTTT
GACGGTGCGCGAACATCGCCCGCCCTTGCAGGTGGTGCGCGATTTTGGCTTGGCCGATGGCACGAGTTTTGTGCATTTGC
ATAATGTTGCTGGCGGTGTGTTGGCGGGTGATCAGCTGACCACCACAATCAAGCTTGCTGCATCGACCAAAGCTCAACTG
ACTACGACTAGCTCGACCCGCATTTATCGCAGCGATGGCGAGCAAATCGCTTATCAACAGGTGCAGGCCACTTTAGCCGA
ACAGAGTTTGCTCGAATATTGGCCGGATACGACGATTCCGTTTGCTGAGAGTTTGTATCAGCAGCAAACCCGCATCGATT
TGGCTGCTGACGCTGGTTTATGTTGGTGGGAATTTCTTGCGCCAGGCCGCGAAGCCTATGGCGAACGTTTTGCCTATCGT
CAGTTGCGATTGGATTGCGATATTTATGCTTTGGGTCGGCCAATTTTGCTGGATCGCATGCGCTTACAACCAAGCCTGCA
ACAACTCAGCAACCCCTTGTATTTTGGCAAATACAGCTATTTGGCAACTGGCTATATTTGTCGGGTTGGTTGGGATGCCG
TCCAGTGGAAAGCCCTCGAAGCTGAATTAATGGCCTTTGCTGCCAGCCAAACCAAGCTTGGGCGCTGCTTGTGGGGTGTG
AGTTGTCTGGCTGCTCATGGGCTGGTGATTCGCGGGTTAAGCAGCAATAGCCGCGATCTGCTGGCGACGGCTTTTGACTA
TTGGCGCTTCGCCAAACAAGCGTTGTACGGCACAACCCCCAATCTGCCGCGCAAAATTTATTAG

Upstream 100 bases:

>100_bases
CTCCACACATGATGTTGGCTGATCTCGCGCCTTGCAGCATTGGTTTAGATGGAGCGAGTATGCGTCACCCCTTGCTGGGT
ACACGCCTCTTTATTAGTTG

Downstream 100 bases:

>100_bases
TGTGAGGCTTGTGCAATGCACCTAACTCCGCGTGAACAGGAAAAATTATTGATTGTGGTGGCCGCCGATTTGGCTCGTCG
TCGTCAGGCGCGTGGCCTCA

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQTATRLERMHGHLALDFTLKQQRTRLTVREHRPPLQVVRDFGLADGTSFVHLHNVAGGVLAGDQLTTTIKLAASTKAQL
TTTSSTRIYRSDGEQIAYQQVQATLAEQSLLEYWPDTTIPFAESLYQQQTRIDLAADAGLCWWEFLAPGREAYGERFAYR
QLRLDCDIYALGRPILLDRMRLQPSLQQLSNPLYFGKYSYLATGYICRVGWDAVQWKALEAELMAFAASQTKLGRCLWGV
SCLAAHGLVIRGLSSNSRDLLATAFDYWRFAKQALYGTTPNLPRKIY

Sequences:

>Translated_287_residues
MQTATRLERMHGHLALDFTLKQQRTRLTVREHRPPLQVVRDFGLADGTSFVHLHNVAGGVLAGDQLTTTIKLAASTKAQL
TTTSSTRIYRSDGEQIAYQQVQATLAEQSLLEYWPDTTIPFAESLYQQQTRIDLAADAGLCWWEFLAPGREAYGERFAYR
QLRLDCDIYALGRPILLDRMRLQPSLQQLSNPLYFGKYSYLATGYICRVGWDAVQWKALEAELMAFAASQTKLGRCLWGV
SCLAAHGLVIRGLSSNSRDLLATAFDYWRFAKQALYGTTPNLPRKIY
>Mature_287_residues
MQTATRLERMHGHLALDFTLKQQRTRLTVREHRPPLQVVRDFGLADGTSFVHLHNVAGGVLAGDQLTTTIKLAASTKAQL
TTTSSTRIYRSDGEQIAYQQVQATLAEQSLLEYWPDTTIPFAESLYQQQTRIDLAADAGLCWWEFLAPGREAYGERFAYR
QLRLDCDIYALGRPILLDRMRLQPSLQQLSNPLYFGKYSYLATGYICRVGWDAVQWKALEAELMAFAASQTKLGRCLWGV
SCLAAHGLVIRGLSSNSRDLLATAFDYWRFAKQALYGTTPNLPRKIY

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_HERA2 (A9AZE9)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001545221.1
- GeneID:   5734335
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_2455
- OMA:   REQNINE
- BioCyc:   HAUR316274:HAUR_2455-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 32447; Mature: 32447

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTATRLERMHGHLALDFTLKQQRTRLTVREHRPPLQVVRDFGLADGTSFVHLHNVAGGV
CCHHHHHHHHCCCEEEEEEEHHHHHHEEHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCE
LAGDQLTTTIKLAASTKAQLTTTSSTRIYRSDGEQIAYQQVQATLAEQSLLEYWPDTTIP
EECCCCEEEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
FAESLYQQQTRIDLAADAGLCWWEFLAPGREAYGERFAYRQLRLDCDIYALGRPILLDRM
HHHHHHHHHHHEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH
RLQPSLQQLSNPLYFGKYSYLATGYICRVGWDAVQWKALEAELMAFAASQTKLGRCLWGV
HCCHHHHHHCCCEEECCHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCLAAHGLVIRGLSSNSRDLLATAFDYWRFAKQALYGTTPNLPRKIY
HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQTATRLERMHGHLALDFTLKQQRTRLTVREHRPPLQVVRDFGLADGTSFVHLHNVAGGV
CCHHHHHHHHCCCEEEEEEEHHHHHHEEHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCE
LAGDQLTTTIKLAASTKAQLTTTSSTRIYRSDGEQIAYQQVQATLAEQSLLEYWPDTTIP
EECCCCEEEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
FAESLYQQQTRIDLAADAGLCWWEFLAPGREAYGERFAYRQLRLDCDIYALGRPILLDRM
HHHHHHHHHHHEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH
RLQPSLQQLSNPLYFGKYSYLATGYICRVGWDAVQWKALEAELMAFAASQTKLGRCLWGV
HCCHHHHHHCCCEEECCHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCLAAHGLVIRGLSSNSRDLLATAFDYWRFAKQALYGTTPNLPRKIY
HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA