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The map label for this gene is ureF [H]

Identifier: 159898975

GI number: 159898975

Start: 3138595

End: 3139332

Strand: Reverse

Name: ureF [H]

Synonym: Haur_2456

Alternate gene names: 159898975

Gene position: 3139332-3138595 (Counterclockwise)

Preceding gene: 159898976

Following gene: 159898974

Centisome position: 49.46

GC content: 52.98

Gene sequence:

>738_bases
TTGCCCAACATTGGCGATTTTTGGCTCGGCTATACTGGCGTGGTGATGTTAACGAACGCTTTTGCCCAACTAAAATTGTT
GCAACTTGCCGATAGTGCTCTTCCAATTGGTTCAACCGCCCATTCGTATGGGGTTGAGTCGTTGGTAGCCGAGGGTCAAT
TGGGCGTGGCTGGGCTGGGCCAGTTTATGCGAGCCTTCATTCAAGAGAGCGGCCAGCTTGAGGCCTACTTGGCGAATCAG
GCTTGGCAATTAGCTGATGCTACTGCCTTTGATCAGGCTTGGCTCGATTTAAATGATCACGCGGCGGCCTTCAAGCCTGC
CCGCGAAAGCCGCCACGCCAGTGCGGTGCTTGGTCGGCGCTTGCTTGGCCTAGCCTTGCAATTGGAACCGTTGCCACGCT
GGCAACAAGCCAGCACTTTAGCCCAATCTCACCAGATCGAAACCCATCATAGCTGTGTTTTTGGCTTGGTGGCAGGCTGC
TTGGCGATTGAGGCTGAGGCCATGCTGGCAGCCTTATTGCAACAAATGACGTTGAGCTTGATTTTAGCATGCCAGAAAAT
TTTGCCGCTTGGGCAGGTACAAGCCCAGCAATTATTGTGGCAGTTGCATCCCACGATTAAAGCGGTCGTTGCCCAAACTC
CACACATGATGTTGGCTGATCTCGCGCCTTGCAGCATTGGTTTAGATGGAGCGAGTATGCGTCACCCCTTGCTGGGTACA
CGCCTCTTTATTAGTTGA

Upstream 100 bases:

>100_bases
ATTCTAATTATTTTAGGTTCGTGTATTTGGGGAATCTTGTTACGATCTTAATTATTTTGGCTTAATCTTGTGCAAACTGC
TTGGTTGAGGTTTAGGCAGT

Downstream 100 bases:

>100_bases
TGCAAACCGCGACCCGCCTTGAGCGTATGCATGGCCATTTGGCGCTCGATTTTACGCTTAAACAGCAGCGTACCCGTTTG
ACGGTGCGCGAACATCGCCC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPNIGDFWLGYTGVVMLTNAFAQLKLLQLADSALPIGSTAHSYGVESLVAEGQLGVAGLGQFMRAFIQESGQLEAYLANQ
AWQLADATAFDQAWLDLNDHAAAFKPARESRHASAVLGRRLLGLALQLEPLPRWQQASTLAQSHQIETHHSCVFGLVAGC
LAIEAEAMLAALLQQMTLSLILACQKILPLGQVQAQQLLWQLHPTIKAVVAQTPHMMLADLAPCSIGLDGASMRHPLLGT
RLFIS

Sequences:

>Translated_245_residues
MPNIGDFWLGYTGVVMLTNAFAQLKLLQLADSALPIGSTAHSYGVESLVAEGQLGVAGLGQFMRAFIQESGQLEAYLANQ
AWQLADATAFDQAWLDLNDHAAAFKPARESRHASAVLGRRLLGLALQLEPLPRWQQASTLAQSHQIETHHSCVFGLVAGC
LAIEAEAMLAALLQQMTLSLILACQKILPLGQVQAQQLLWQLHPTIKAVVAQTPHMMLADLAPCSIGLDGASMRHPLLGT
RLFIS
>Mature_244_residues
PNIGDFWLGYTGVVMLTNAFAQLKLLQLADSALPIGSTAHSYGVESLVAEGQLGVAGLGQFMRAFIQESGQLEAYLANQA
WQLADATAFDQAWLDLNDHAAAFKPARESRHASAVLGRRLLGLALQLEPLPRWQQASTLAQSHQIETHHSCVFGLVAGCL
AIEAEAMLAALLQQMTLSLILACQKILPLGQVQAQQLLWQLHPTIKAVVAQTPHMMLADLAPCSIGLDGASMRHPLLGTR
LFIS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 26394; Mature: 26263

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNIGDFWLGYTGVVMLTNAFAQLKLLQLADSALPIGSTAHSYGVESLVAEGQLGVAGLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHH
QFMRAFIQESGQLEAYLANQAWQLADATAFDQAWLDLNDHAAAFKPARESRHASAVLGRR
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHH
LLGLALQLEPLPRWQQASTLAQSHQIETHHSCVFGLVAGCLAIEAEAMLAALLQQMTLSL
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILACQKILPLGQVQAQQLLWQLHPTIKAVVAQTPHMMLADLAPCSIGLDGASMRHPLLGT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHCCCHHCH
RLFIS
HEECC
>Mature Secondary Structure 
PNIGDFWLGYTGVVMLTNAFAQLKLLQLADSALPIGSTAHSYGVESLVAEGQLGVAGLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHH
QFMRAFIQESGQLEAYLANQAWQLADATAFDQAWLDLNDHAAAFKPARESRHASAVLGRR
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHH
LLGLALQLEPLPRWQQASTLAQSHQIETHHSCVFGLVAGCLAIEAEAMLAALLQQMTLSL
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILACQKILPLGQVQAQQLLWQLHPTIKAVVAQTPHMMLADLAPCSIGLDGASMRHPLLGT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHCCCHHCH
RLFIS
HEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA