| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898969
Identifier: 159898969
GI number: 159898969
Start: 3133731
End: 3134459
Strand: Direct
Name: 159898969
Synonym: Haur_2450
Alternate gene names: NA
Gene position: 3133731-3134459 (Clockwise)
Preceding gene: 159898968
Following gene: 159898979
Centisome position: 49.38
GC content: 49.93
Gene sequence:
>729_bases ATGACTGAACAACCATTATGGCAACAATATCGCCAACAAATTGAGGCCTATCGCGATGCCCAGCTAAATTTCGATTTGCA GCGCGTCCACGAATATACCAAGGAAAATGGCTGGAATGTTGATGATTATGAGGCTGAATTGCCACCTGAACCGCCAGGCC AGCCCCAAGCTCATGGCTCATGGCAAGCAGCCTGCGCGGTGTTGCGCGAATATCGCTTTCCACCTCCTGATCTAATCACT GGAATTTTTATTCCCGACCAGCCGCTCGAACAACGAATTATGCTGCTACGTGGCACATTTTTGGGCTTTAGCTTCTATTT TGGGGTAAAAATTGGCGGTGTGATCGACGAAACTCGCGAGACTGAGCACGGCCCTGAGCGGGTTTGGGGCTACAACTATC AAACCTTGCAAGGCCATTTCGAGCGTGGCCAAATTGAATTTACGATCGTTAAATTGCTTGAAACCGGCCAAGTGCTATTT CGAATTCATGCCTTTTCGCAAACCGGGCGCATTCGCAACCCATTCTATTGGCTAGGCTTTAAGTTGTTTGGGCGGCATTT GCAATTGCGCTTTGCCCGTGATGCAATGCAGCGAATGCAAACCTTGGTGCAAGAAGCCTTGGCTGGTGTGCCAAGCCAAG CCAGCCAACCAACGCCCATTCAAAGCACCGCCAACAATCCCGAAGCCGCTGAACAACTAGCCGAAGTTATCGAAAACCAA GCATCGTGA
Upstream 100 bases:
>100_bases ACCTTTTGCCAACGAGTGGTTGAATTTGCCCAAGCCCAACAGCTCGGCGAAATTCAAACCAGCACAATTGAACAAACGCC GGAGGGCGAGGTAGTAATTC
Downstream 100 bases:
>100_bases ACTAACAGCGTTCCCTCACCCCCTAGCCCCCTCTCCCGCACGCGAGGCGAGGGGGAAACCCTTGATCATGATCATTGGAT CGCCCCTCGCCCGCCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTEQPLWQQYRQQIEAYRDAQLNFDLQRVHEYTKENGWNVDDYEAELPPEPPGQPQAHGSWQAACAVLREYRFPPPDLIT GIFIPDQPLEQRIMLLRGTFLGFSFYFGVKIGGVIDETRETEHGPERVWGYNYQTLQGHFERGQIEFTIVKLLETGQVLF RIHAFSQTGRIRNPFYWLGFKLFGRHLQLRFARDAMQRMQTLVQEALAGVPSQASQPTPIQSTANNPEAAEQLAEVIENQ AS
Sequences:
>Translated_242_residues MTEQPLWQQYRQQIEAYRDAQLNFDLQRVHEYTKENGWNVDDYEAELPPEPPGQPQAHGSWQAACAVLREYRFPPPDLIT GIFIPDQPLEQRIMLLRGTFLGFSFYFGVKIGGVIDETRETEHGPERVWGYNYQTLQGHFERGQIEFTIVKLLETGQVLF RIHAFSQTGRIRNPFYWLGFKLFGRHLQLRFARDAMQRMQTLVQEALAGVPSQASQPTPIQSTANNPEAAEQLAEVIENQ AS >Mature_241_residues TEQPLWQQYRQQIEAYRDAQLNFDLQRVHEYTKENGWNVDDYEAELPPEPPGQPQAHGSWQAACAVLREYRFPPPDLITG IFIPDQPLEQRIMLLRGTFLGFSFYFGVKIGGVIDETRETEHGPERVWGYNYQTLQGHFERGQIEFTIVKLLETGQVLFR IHAFSQTGRIRNPFYWLGFKLFGRHLQLRFARDAMQRMQTLVQEALAGVPSQASQPTPIQSTANNPEAAEQLAEVIENQA S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27940; Mature: 27809
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQPLWQQYRQQIEAYRDAQLNFDLQRVHEYTKENGWNVDDYEAELPPEPPGQPQAHGS CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC WQAACAVLREYRFPPPDLITGIFIPDQPLEQRIMLLRGTFLGFSFYFGVKIGGVIDETRE HHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHC TEHGPERVWGYNYQTLQGHFERGQIEFTIVKLLETGQVLFRIHAFSQTGRIRNPFYWLGF CCCCCHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHH KLFGRHLQLRFARDAMQRMQTLVQEALAGVPSQASQPTPIQSTANNPEAAEQLAEVIENQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC AS CC >Mature Secondary Structure TEQPLWQQYRQQIEAYRDAQLNFDLQRVHEYTKENGWNVDDYEAELPPEPPGQPQAHGS CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC WQAACAVLREYRFPPPDLITGIFIPDQPLEQRIMLLRGTFLGFSFYFGVKIGGVIDETRE HHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHC TEHGPERVWGYNYQTLQGHFERGQIEFTIVKLLETGQVLFRIHAFSQTGRIRNPFYWLGF CCCCCHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHH KLFGRHLQLRFARDAMQRMQTLVQEALAGVPSQASQPTPIQSTANNPEAAEQLAEVIENQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC AS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA