| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898968
Identifier: 159898968
GI number: 159898968
Start: 3133097
End: 3133738
Strand: Direct
Name: 159898968
Synonym: Haur_2449
Alternate gene names: NA
Gene position: 3133097-3133738 (Clockwise)
Preceding gene: 159898967
Following gene: 159898969
Centisome position: 49.37
GC content: 51.87
Gene sequence:
>642_bases ATGCAACGACGGCAATTTGGCTGGATGTTCGGACTGGGCTTGGGGGCAATCGGCTTGGTGCAACTTTGGCAGCGCCGTTT CAAGCGTGGAAAAGCTACTCAAACGCCACAAGCCGGTAGTGGTTCACTCTATCGCCGCCGCTACTGGGTCGATTTTCAGG CGCTCAATCAATCGCCCGAAAGCTTAGTTAAGCATATCAAGGCCAATTTGCCAGATTTCAGCCCTGGTTTATTCGCTGAT TTTCGCAAAGCTACGGGCAACGAGCGGGTAATGCAGGTTGGCGATGAGTATGATATTGCGATTTTGGGACCGTGGAATGG ATCGGTACGGGTGTCCACCAGCCAGCCGTTGCGCTTTGGATTTTGTACGCTTGAGGGTCATCCCGAGGCCGGGCAAATTC ATTTTGAGCTTAAACCACACCCTGAGCGCTCCAATACATGGCGTTTTGAAATCGCTTCGGAAGCGCGTTCACGCGATGGC TTGGTTGAAATGGCCTATCGCATTGGCAAAGTAGTGCAAACCCAAGTTTGGAGCACCTTTTGCCAACGAGTGGTTGAATT TGCCCAAGCCCAACAGCTCGGCGAAATTCAAACCAGCACAATTGAACAAACGCCGGAGGGCGAGGTAGTAATTCATGACT GA
Upstream 100 bases:
>100_bases TCTGATAATCCGCGTTGTTGTGGTTTAACTCAAAGCCTAAAATCGTGGTGCTGTTTTTGCATAAAGTGCCAGCAGCAACT GAGTTACAATGAGGTTAACA
Downstream 100 bases:
>100_bases ACAACCATTATGGCAACAATATCGCCAACAAATTGAGGCCTATCGCGATGCCCAGCTAAATTTCGATTTGCAGCGCGTCC ACGAATATACCAAGGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQRRQFGWMFGLGLGAIGLVQLWQRRFKRGKATQTPQAGSGSLYRRRYWVDFQALNQSPESLVKHIKANLPDFSPGLFAD FRKATGNERVMQVGDEYDIAILGPWNGSVRVSTSQPLRFGFCTLEGHPEAGQIHFELKPHPERSNTWRFEIASEARSRDG LVEMAYRIGKVVQTQVWSTFCQRVVEFAQAQQLGEIQTSTIEQTPEGEVVIHD
Sequences:
>Translated_213_residues MQRRQFGWMFGLGLGAIGLVQLWQRRFKRGKATQTPQAGSGSLYRRRYWVDFQALNQSPESLVKHIKANLPDFSPGLFAD FRKATGNERVMQVGDEYDIAILGPWNGSVRVSTSQPLRFGFCTLEGHPEAGQIHFELKPHPERSNTWRFEIASEARSRDG LVEMAYRIGKVVQTQVWSTFCQRVVEFAQAQQLGEIQTSTIEQTPEGEVVIHD >Mature_213_residues MQRRQFGWMFGLGLGAIGLVQLWQRRFKRGKATQTPQAGSGSLYRRRYWVDFQALNQSPESLVKHIKANLPDFSPGLFAD FRKATGNERVMQVGDEYDIAILGPWNGSVRVSTSQPLRFGFCTLEGHPEAGQIHFELKPHPERSNTWRFEIASEARSRDG LVEMAYRIGKVVQTQVWSTFCQRVVEFAQAQQLGEIQTSTIEQTPEGEVVIHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24242; Mature: 24242
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRQFGWMFGLGLGAIGLVQLWQRRFKRGKATQTPQAGSGSLYRRRYWVDFQALNQSPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHEEEEEHHHHCCCHH SLVKHIKANLPDFSPGLFADFRKATGNERVMQVGDEYDIAILGPWNGSVRVSTSQPLRFG HHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCEEEECCCCCEEE FCTLEGHPEAGQIHFELKPHPERSNTWRFEIASEARSRDGLVEMAYRIGKVVQTQVWSTF EEEECCCCCCCEEEEEECCCCCCCCCEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHH CQRVVEFAQAQQLGEIQTSTIEQTPEGEVVIHD HHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEC >Mature Secondary Structure MQRRQFGWMFGLGLGAIGLVQLWQRRFKRGKATQTPQAGSGSLYRRRYWVDFQALNQSPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHEEEEEHHHHCCCHH SLVKHIKANLPDFSPGLFADFRKATGNERVMQVGDEYDIAILGPWNGSVRVSTSQPLRFG HHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCEEEECCCCCEEE FCTLEGHPEAGQIHFELKPHPERSNTWRFEIASEARSRDGLVEMAYRIGKVVQTQVWSTF EEEECCCCCCCEEEEEECCCCCCCCCEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHH CQRVVEFAQAQQLGEIQTSTIEQTPEGEVVIHD HHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA