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The map label for this gene is ytcJ [H]

Identifier: 159898948

GI number: 159898948

Start: 3110566

End: 3112197

Strand: Reverse

Name: ytcJ [H]

Synonym: Haur_2427

Alternate gene names: 159898948

Gene position: 3112197-3110566 (Counterclockwise)

Preceding gene: 159898950

Following gene: 159898947

Centisome position: 49.04

GC content: 53.55

Gene sequence:

>1632_bases
ATGGCCCGTGATCGTTTGTTAGCTGGTGGCGCGATTTGGACGCTCGACCCAACGGTGGGTGTGGCTGAAGCAATCGCTTT
GCGCGATGGTAAGGTATTGGCAGTTGGCAACAATGCCGAGGTTCGGGCAGCCATCAGCGCCGATTATGATTATATTGATT
TAGCGGGGCGCAGCGTTATTCCTGGCATTTGCGATGCGCATATTCACTTGCTTTGGAGCGCATTGCTGGCCGATCAGATT
GATCTGCAAGAGGTTGCTTCGTTTGAGCAGGCATTAGAAATTATTCGCCGCCACGCTGAACGCTTGCCCGCCGATGCTTG
GGTGCTTGGCTCAGGCTGGGATCATAGCTTGTGGCAACGTGATTGGCCCACCGCCAGCGAGCTTGATCAGGTAACTGGTG
GCCGCCCAGCTTTCATCACGCGCAAAGATTTGCACTCAGCTTGGGTCAATAATGTTGCCCTCCAACGTGCCAATATCAGC
AAATTTAGCAGTGACCCCGATGGTGGTAGCATAGGCCGTGATAGCGCAGGCGAACCCAACGGTATGCTGTTTGAAAATGG
TCAATTAGCAGTCAAAGCTTGCATTCCAGAGCCAAGCAATGCCCAAAAAGAGGCCAGCATTCAAACCTTCATCAAACGCA
TGCATCGGCGGGGTATCACCAGTTTGCATGTGCCCGAAGGCCCAGATTGCTTTGCAGCGGTGCAGGCACTTTATGGGCGG
GGCGCACTCGAAATGCGCATTTTGCACCATTTACGCATGGATTTGCTTGATCATGCAGTGGCAATGGGACTCAAATCGGG
CTTGGGCGATGCATGGCTGCGCTTTGGCAATTTGAAAATATTTAGCGATGGTTCGCTTGGCTCGGCTACTGCGCACATGC
TCACACCATTTGATAATCTACCAGCCAATGCCCCGCATCCCTATGGCATTCCGATGTTGGATCGCGAAGATCTGTTTGCG
ACGATTGATCGGGCGATTGCCAATGATATTAGCGTGATTGTGCATGCTATCGGTGATGCTGCCAATCGCACGGTGCTCGA
TGCAATTGAGGCGGCCATCAAGGCCAATCCTGAAACCTTGCGACCCAGCCTTGACACTGGCCCGGTGGCGGCGCGAATTC
CCAACCGCATTGAGCATGCCCAAGTTTTACACCCTGATGATATTCGACGCTTCGGCCAGCTTGGGGTGATTGCCTCGATG
CAGCCAATTCATGCCACCAGCGATATTACCTTGGCTGATCGCTTGTGGGGCCAGCGTTCGCAATATGCCTATGCTTGGCG
TAGTTTGCAGGCCAGCGGCGCGATTTTGGCCTTTGGCTCCGATGCGCCCGTTGAATCGTGGGACCCATGGGCTGGCTTGC
AGGCAGCAGTCACCCGTCAACGCCCTGATGCCACGCCAGCAGGCGGGTGGTATCCTGAACAATGCTTGAGTTTAAACGAG
GCACTGTGGGCCTACACGGTTGGCCCAGCAATTACCTCCGGTGAGCAAGCGTTTAAAGGTAGTTTGAGCGTGGGTAAACT
CGCCGATTTGGTAATTCTTGATCAAGATTTAGCCCAAGTTGCCAACGATCAAGTAGCCAAGGTTCAAGTTGCCCAAACGA
TCATTGAGGGACAAACGGTATGGGAAGGTTAA

Upstream 100 bases:

>100_bases
AATTCTCCTTATAATTAGTAATTCCTAAGCAGCAACTAAGCAGGATATATGCCATGTTTTTGTTACAATGGTAAGCAGTC
TTTGTTACTGGAGAACAACC

Downstream 100 bases:

>100_bases
TCGGCATTTTCAGTTTAATCGTGATCTTGGTGGGCTGCACGGAACAACCAGCCGCGCCAGCGAGCAACCAAATAACGACA
GCACCAACCATGATCCAAGC

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 542

Protein sequence:

>543_residues
MARDRLLAGGAIWTLDPTVGVAEAIALRDGKVLAVGNNAEVRAAISADYDYIDLAGRSVIPGICDAHIHLLWSALLADQI
DLQEVASFEQALEIIRRHAERLPADAWVLGSGWDHSLWQRDWPTASELDQVTGGRPAFITRKDLHSAWVNNVALQRANIS
KFSSDPDGGSIGRDSAGEPNGMLFENGQLAVKACIPEPSNAQKEASIQTFIKRMHRRGITSLHVPEGPDCFAAVQALYGR
GALEMRILHHLRMDLLDHAVAMGLKSGLGDAWLRFGNLKIFSDGSLGSATAHMLTPFDNLPANAPHPYGIPMLDREDLFA
TIDRAIANDISVIVHAIGDAANRTVLDAIEAAIKANPETLRPSLDTGPVAARIPNRIEHAQVLHPDDIRRFGQLGVIASM
QPIHATSDITLADRLWGQRSQYAYAWRSLQASGAILAFGSDAPVESWDPWAGLQAAVTRQRPDATPAGGWYPEQCLSLNE
ALWAYTVGPAITSGEQAFKGSLSVGKLADLVILDQDLAQVANDQVAKVQVAQTIIEGQTVWEG

Sequences:

>Translated_543_residues
MARDRLLAGGAIWTLDPTVGVAEAIALRDGKVLAVGNNAEVRAAISADYDYIDLAGRSVIPGICDAHIHLLWSALLADQI
DLQEVASFEQALEIIRRHAERLPADAWVLGSGWDHSLWQRDWPTASELDQVTGGRPAFITRKDLHSAWVNNVALQRANIS
KFSSDPDGGSIGRDSAGEPNGMLFENGQLAVKACIPEPSNAQKEASIQTFIKRMHRRGITSLHVPEGPDCFAAVQALYGR
GALEMRILHHLRMDLLDHAVAMGLKSGLGDAWLRFGNLKIFSDGSLGSATAHMLTPFDNLPANAPHPYGIPMLDREDLFA
TIDRAIANDISVIVHAIGDAANRTVLDAIEAAIKANPETLRPSLDTGPVAARIPNRIEHAQVLHPDDIRRFGQLGVIASM
QPIHATSDITLADRLWGQRSQYAYAWRSLQASGAILAFGSDAPVESWDPWAGLQAAVTRQRPDATPAGGWYPEQCLSLNE
ALWAYTVGPAITSGEQAFKGSLSVGKLADLVILDQDLAQVANDQVAKVQVAQTIIEGQTVWEG
>Mature_542_residues
ARDRLLAGGAIWTLDPTVGVAEAIALRDGKVLAVGNNAEVRAAISADYDYIDLAGRSVIPGICDAHIHLLWSALLADQID
LQEVASFEQALEIIRRHAERLPADAWVLGSGWDHSLWQRDWPTASELDQVTGGRPAFITRKDLHSAWVNNVALQRANISK
FSSDPDGGSIGRDSAGEPNGMLFENGQLAVKACIPEPSNAQKEASIQTFIKRMHRRGITSLHVPEGPDCFAAVQALYGRG
ALEMRILHHLRMDLLDHAVAMGLKSGLGDAWLRFGNLKIFSDGSLGSATAHMLTPFDNLPANAPHPYGIPMLDREDLFAT
IDRAIANDISVIVHAIGDAANRTVLDAIEAAIKANPETLRPSLDTGPVAARIPNRIEHAQVLHPDDIRRFGQLGVIASMQ
PIHATSDITLADRLWGQRSQYAYAWRSLQASGAILAFGSDAPVESWDPWAGLQAAVTRQRPDATPAGGWYPEQCLSLNEA
LWAYTVGPAITSGEQAFKGSLSVGKLADLVILDQDLAQVANDQVAKVQVAQTIIEGQTVWEG

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 58653; Mature: 58522

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDRLLAGGAIWTLDPTVGVAEAIALRDGKVLAVGNNAEVRAAISADYDYIDLAGRSVI
CCCCCEEECCEEEEECCCHHHHHHHEECCCCEEEECCCCEEEEEEECCCCEEECCCCCCC
PGICDAHIHLLWSALLADQIDLQEVASFEQALEIIRRHAERLPADAWVLGSGWDHSLWQR
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCC
DWPTASELDQVTGGRPAFITRKDLHSAWVNNVALQRANISKFSSDPDGGSIGRDSAGEPN
CCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
GMLFENGQLAVKACIPEPSNAQKEASIQTFIKRMHRRGITSLHVPEGPDCFAAVQALYGR
CEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCC
GALEMRILHHLRMDLLDHAVAMGLKSGLGDAWLRFGNLKIFSDGSLGSATAHMLTPFDNL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCEEEEECCCCCCCHHHHCCCCCCC
PANAPHPYGIPMLDREDLFATIDRAIANDISVIVHAIGDAANRTVLDAIEAAIKANPETL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHC
RPSLDTGPVAARIPNRIEHAQVLHPDDIRRFGQLGVIASMQPIHATSDITLADRLWGQRS
CCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCC
QYAYAWRSLQASGAILAFGSDAPVESWDPWAGLQAAVTRQRPDATPAGGWYPEQCLSLNE
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
ALWAYTVGPAITSGEQAFKGSLSVGKLADLVILDQDLAQVANDQVAKVQVAQTIIEGQTV
HHHEEECCCCCCCCHHHHCCCCCHHHHHHHEEECHHHHHHCCCHHHHHHHHHHHHCCCCC
WEG
CCC
>Mature Secondary Structure 
ARDRLLAGGAIWTLDPTVGVAEAIALRDGKVLAVGNNAEVRAAISADYDYIDLAGRSVI
CCCCEEECCEEEEECCCHHHHHHHEECCCCEEEECCCCEEEEEEECCCCEEECCCCCCC
PGICDAHIHLLWSALLADQIDLQEVASFEQALEIIRRHAERLPADAWVLGSGWDHSLWQR
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCC
DWPTASELDQVTGGRPAFITRKDLHSAWVNNVALQRANISKFSSDPDGGSIGRDSAGEPN
CCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
GMLFENGQLAVKACIPEPSNAQKEASIQTFIKRMHRRGITSLHVPEGPDCFAAVQALYGR
CEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCC
GALEMRILHHLRMDLLDHAVAMGLKSGLGDAWLRFGNLKIFSDGSLGSATAHMLTPFDNL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCEEEEECCCCCCCHHHHCCCCCCC
PANAPHPYGIPMLDREDLFATIDRAIANDISVIVHAIGDAANRTVLDAIEAAIKANPETL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHC
RPSLDTGPVAARIPNRIEHAQVLHPDDIRRFGQLGVIASMQPIHATSDITLADRLWGQRS
CCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCC
QYAYAWRSLQASGAILAFGSDAPVESWDPWAGLQAAVTRQRPDATPAGGWYPEQCLSLNE
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
ALWAYTVGPAITSGEQAFKGSLSVGKLADLVILDQDLAQVANDQVAKVQVAQTIIEGQTV
HHHEEECCCCCCCCHHHHCCCCCHHHHHHHEEECHHHHHHCCCHHHHHHHHHHHHCCCCC
WEG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]