Click here to switch to the map view.

The map label for this gene is yojK [H]

Identifier: 159898929

GI number: 159898929

Start: 3070063

End: 3071406

Strand: Reverse

Name: yojK [H]

Synonym: Haur_2408

Alternate gene names: 159898929

Gene position: 3071406-3070063 (Counterclockwise)

Preceding gene: 159898930

Following gene: 159898928

Centisome position: 48.39

GC content: 48.14

Gene sequence:

>1344_bases
ATGGCGACGATTGTTATCAGTATGTTTCCCGAAGAAGGCCATCTTATTCCTAGTTTCAAGCTTGGCAAGAGCTTAAAAGC
CCAAGGTCATCAGGTTTATTATTTAGCCTTGGCCGATTTTGAGGAGTATATTCGCAAGCAGGGTTTTGAATATTTGCCCT
TGTTTGCTGAGGATTTTCCCAAGGGCTTTCGTGCTCAGCAAACCGAGCGAATTGCGAACACCCGTGGCCGAGCCTTTTTG
AAAGAGGTTTCACAAACGGCGTTTTATCTCAAGTTGTTTCAAACTGTACATGAAGATCAAAATCCAATCAAGCGTAGTTT
GTTGGAAATTGGGACAGATTTATGTCTTTTTGATGGATTTTTGGCCCCGCTGAGCCTTATGGCGCGGCATGCTGGGCTGG
AAGTAATTAGTCTGAGTATTAATATTAATCTTCCGCAGGCCGCCAATTATCCGCCAGTTGTCACCAATATTGTGCCCGAT
AACACGCCTGCCTCGCTCTCTAAAGCTGGCATGGCTTGGAAATTTAGTGGGCTAGCAATCAAAATAACCAACCTTTTGAT
TGGCTACAATTTCCAGAAAAAGCTAACCGAACTGGCAACCCACTTTGGGTTTTCAGCCGATTTAGTTGTGCCAGCGGCCC
TCTTTCCACGCTTGCGACCCCAACTTGAGATACCCGAACTCGTGCTTTGCCCGCAAGCCTTTGATTTTCCACGGCCAAGC
GTTGAGCAAGGGATTTTCTACTGTGAGCCATCAATCGATCTTGATCGCCAAGAAGCGGCCTTTGATTGGTCGCAGATTGA
CCCCAACAAGCCGCTGATTTTTTGTACCTTGGGCAGCCAAAGCCATATCTACAAGCCAAGTCGGCGCTTTTTTCAAACCG
TGATCGACACCATGCGCAGTCGCCCCGATTGGCAATTGATTATGGCGCTCGGCCAGAAATTTCAAGCCCATGAATTTGCC
AATGTGCCAGCCAATGTGCAGTTGCTGCAATGGGCTTCGGTCGAGCAAATTTTGCCGCGCACCAGCGTGATGATTACCCA
TGGCGGGGTTGGCACGATTAAGGAATGTGTCTATTTCAACGTGCCAATGGTGGTTTTTCCAGGCAACCGTGATCAACCTG
GCTATGCGGCGCGGGTTGTTTACCATGAGCTAGGTTTGATGGGTTCGATGGGGAAAGTTTCGGCCCAAGCGCTGGAAACC
ATGCTCAACCAAGTGATTCAAAATCCTAACTTTAAACAACGAGTTACGGCAATGGGCGAGGAATTTCGCGCCTTGGAAGC
TGCTAGCCCAGCGCTGGAATTAATTCAAAGCAAATTACCGCATACCCGAACCGTTGCCTCGTAA

Upstream 100 bases:

>100_bases
AGAAGGATTAGGATGAGGTATCTAACAACTGACCCCTACCGCCGTGGGAGAGGGTAAGGGAACTTAACAGCGATTTCACC
ATAACGGGGAGTATGATCGA

Downstream 100 bases:

>100_bases
CCTTGCCCCTAGGCAGTGCCGCCTCTGGTGCTCAATTAAGGCTGATTCCTAGGTTATTTGTTTGCGATCAACTGAGGTGT
TTGCTGATTGAGGTTGGCAG

Product: glycosyltransferase family 28 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MATIVISMFPEEGHLIPSFKLGKSLKAQGHQVYYLALADFEEYIRKQGFEYLPLFAEDFPKGFRAQQTERIANTRGRAFL
KEVSQTAFYLKLFQTVHEDQNPIKRSLLEIGTDLCLFDGFLAPLSLMARHAGLEVISLSININLPQAANYPPVVTNIVPD
NTPASLSKAGMAWKFSGLAIKITNLLIGYNFQKKLTELATHFGFSADLVVPAALFPRLRPQLEIPELVLCPQAFDFPRPS
VEQGIFYCEPSIDLDRQEAAFDWSQIDPNKPLIFCTLGSQSHIYKPSRRFFQTVIDTMRSRPDWQLIMALGQKFQAHEFA
NVPANVQLLQWASVEQILPRTSVMITHGGVGTIKECVYFNVPMVVFPGNRDQPGYAARVVYHELGLMGSMGKVSAQALET
MLNQVIQNPNFKQRVTAMGEEFRALEAASPALELIQSKLPHTRTVAS

Sequences:

>Translated_447_residues
MATIVISMFPEEGHLIPSFKLGKSLKAQGHQVYYLALADFEEYIRKQGFEYLPLFAEDFPKGFRAQQTERIANTRGRAFL
KEVSQTAFYLKLFQTVHEDQNPIKRSLLEIGTDLCLFDGFLAPLSLMARHAGLEVISLSININLPQAANYPPVVTNIVPD
NTPASLSKAGMAWKFSGLAIKITNLLIGYNFQKKLTELATHFGFSADLVVPAALFPRLRPQLEIPELVLCPQAFDFPRPS
VEQGIFYCEPSIDLDRQEAAFDWSQIDPNKPLIFCTLGSQSHIYKPSRRFFQTVIDTMRSRPDWQLIMALGQKFQAHEFA
NVPANVQLLQWASVEQILPRTSVMITHGGVGTIKECVYFNVPMVVFPGNRDQPGYAARVVYHELGLMGSMGKVSAQALET
MLNQVIQNPNFKQRVTAMGEEFRALEAASPALELIQSKLPHTRTVAS
>Mature_446_residues
ATIVISMFPEEGHLIPSFKLGKSLKAQGHQVYYLALADFEEYIRKQGFEYLPLFAEDFPKGFRAQQTERIANTRGRAFLK
EVSQTAFYLKLFQTVHEDQNPIKRSLLEIGTDLCLFDGFLAPLSLMARHAGLEVISLSININLPQAANYPPVVTNIVPDN
TPASLSKAGMAWKFSGLAIKITNLLIGYNFQKKLTELATHFGFSADLVVPAALFPRLRPQLEIPELVLCPQAFDFPRPSV
EQGIFYCEPSIDLDRQEAAFDWSQIDPNKPLIFCTLGSQSHIYKPSRRFFQTVIDTMRSRPDWQLIMALGQKFQAHEFAN
VPANVQLLQWASVEQILPRTSVMITHGGVGTIKECVYFNVPMVVFPGNRDQPGYAARVVYHELGLMGSMGKVSAQALETM
LNQVIQNPNFKQRVTAMGEEFRALEAASPALELIQSKLPHTRTVAS

Specific function: Unknown

COG id: COG1819

COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glycosyltransferase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25146058, Length=215, Percent_Identity=22.7906976744186, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17554280, Length=215, Percent_Identity=22.3255813953488, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002213
- InterPro:   IPR006326 [H]

Pfam domain/function: PF00201 UDPGT [H]

EC number: NA

Molecular weight: Translated: 50111; Mature: 49979

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIVISMFPEEGHLIPSFKLGKSLKAQGHQVYYLALADFEEYIRKQGFEYLPLFAEDFP
CCEEEEEECCCCCCCCCCHHCCCHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHCC
KGFRAQQTERIANTRGRAFLKEVSQTAFYLKLFQTVHEDQNPIKRSLLEIGTDLCLFDGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LAPLSLMARHAGLEVISLSININLPQAANYPPVVTNIVPDNTPASLSKAGMAWKFSGLAI
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEECCEEE
KITNLLIGYNFQKKLTELATHFGFSADLVVPAALFPRLRPQLEIPELVLCPQAFDFPRPS
EEEHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC
VEQGIFYCEPSIDLDRQEAAFDWSQIDPNKPLIFCTLGSQSHIYKPSRRFFQTVIDTMRS
HHCCEEEECCCCCCCCHHHCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
RPDWQLIMALGQKFQAHEFANVPANVQLLQWASVEQILPRTSVMITHGGVGTIKECVYFN
CCCHHHHHHHHCHHHHHHHCCCCCCEEEEECCCHHHHCCCCEEEEEECCCHHHHHHHHCC
VPMVVFPGNRDQPGYAARVVYHELGLMGSMGKVSAQALETMLNQVIQNPNFKQRVTAMGE
CCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EFRALEAASPALELIQSKLPHTRTVAS
HHHHHHHCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ATIVISMFPEEGHLIPSFKLGKSLKAQGHQVYYLALADFEEYIRKQGFEYLPLFAEDFP
CEEEEEECCCCCCCCCCHHCCCHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHCC
KGFRAQQTERIANTRGRAFLKEVSQTAFYLKLFQTVHEDQNPIKRSLLEIGTDLCLFDGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LAPLSLMARHAGLEVISLSININLPQAANYPPVVTNIVPDNTPASLSKAGMAWKFSGLAI
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEECCEEE
KITNLLIGYNFQKKLTELATHFGFSADLVVPAALFPRLRPQLEIPELVLCPQAFDFPRPS
EEEHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC
VEQGIFYCEPSIDLDRQEAAFDWSQIDPNKPLIFCTLGSQSHIYKPSRRFFQTVIDTMRS
HHCCEEEECCCCCCCCHHHCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
RPDWQLIMALGQKFQAHEFANVPANVQLLQWASVEQILPRTSVMITHGGVGTIKECVYFN
CCCHHHHHHHHCHHHHHHHCCCCCCEEEEECCCHHHHCCCCEEEEEECCCHHHHHHHHCC
VPMVVFPGNRDQPGYAARVVYHELGLMGSMGKVSAQALETMLNQVIQNPNFKQRVTAMGE
CCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EFRALEAASPALELIQSKLPHTRTVAS
HHHHHHHCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]