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The map label for this gene is 159898896

Identifier: 159898896

GI number: 159898896

Start: 3027845

End: 3028639

Strand: Reverse

Name: 159898896

Synonym: Haur_2375

Alternate gene names: NA

Gene position: 3028639-3027845 (Counterclockwise)

Preceding gene: 159898897

Following gene: 159898895

Centisome position: 47.72

GC content: 41.51

Gene sequence:

>795_bases
ATGAATCGCTTTGACGATTGTGGTGACGTTGTGCGTAAGAGCATCCTCCACCTCAATGATTGCGAGCAATGGATGTTGAA
TGCCTCACAAATTGATGAATATATCGCCGTAATTACACGTCTTTACCCCGAACTACCTGATAATCTTGAATTGTTATCCA
AGTGGATTAGCAACTATCATTTCGAACATCGCTTAATTCAAGCCTTGGCTGATCAGTCACATCCAGACCATGGGCGTGCT
TGGAATGACCTCATTCGTCAGATAGCCAACCAGCTCGCTCCGAAAGAAGTTTATGCGTATGGCGATCGTCAGACGATTAT
GAGCGATCTCATCCAAGAAACATGTTTGCTGATTTTCAAATCGATTAATCAATTTAAATACAAAAGTCGCTTACGGACGT
GGGTCTACACAATTGTTAATAATCAATATTTGCAATATGTACGCAAGTTGAAAACCCGTAATCAACTTAAGCCTGATCAA
TCGATTGATGATGAAATTGGCTTGGAGCTGGCTGACCGAAACGAATCGCTGGAGAGTGTTGTGGATTTTAATCTGCTGCA
TCAACATTGTATTGCAATTTTGAGGCAAGCTCCTGACCCGCGATTAGCTGATATTTTTCAATATTATGCGGTAGAAGAGT
TGACGCTTAAGCAAATAGCCGCAAAAGAGGGCTTAAGTATTGGGCGGGTGCACGAACTGTTTAAAAAAATTCAAACAATC
CTCTATACTGATCCGATAATTATTTATTGGCGTAACGATGCAGCAACCTCTGACGATTCGGCAGAACCCAAGTAA

Upstream 100 bases:

>100_bases
AGCATCCTTAATTCCTTGCATATTTTTATCGTTAAAGCTACAATACGCCCTACTTATGGCCTTTTTTAGATTGAATTGCA
TCGGCCCACGAGGTAGCTTT

Downstream 100 bases:

>100_bases
AAATTTGCGATAACTGCATCATATTAATTAGGAATTAGGATCGAGCTGTTGTTAATGGCGCATTGTATGGACGGTGCCAA
GCGATGTAGGCCGTATTTTT

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNRFDDCGDVVRKSILHLNDCEQWMLNASQIDEYIAVITRLYPELPDNLELLSKWISNYHFEHRLIQALADQSHPDHGRA
WNDLIRQIANQLAPKEVYAYGDRQTIMSDLIQETCLLIFKSINQFKYKSRLRTWVYTIVNNQYLQYVRKLKTRNQLKPDQ
SIDDEIGLELADRNESLESVVDFNLLHQHCIAILRQAPDPRLADIFQYYAVEELTLKQIAAKEGLSIGRVHELFKKIQTI
LYTDPIIIYWRNDAATSDDSAEPK

Sequences:

>Translated_264_residues
MNRFDDCGDVVRKSILHLNDCEQWMLNASQIDEYIAVITRLYPELPDNLELLSKWISNYHFEHRLIQALADQSHPDHGRA
WNDLIRQIANQLAPKEVYAYGDRQTIMSDLIQETCLLIFKSINQFKYKSRLRTWVYTIVNNQYLQYVRKLKTRNQLKPDQ
SIDDEIGLELADRNESLESVVDFNLLHQHCIAILRQAPDPRLADIFQYYAVEELTLKQIAAKEGLSIGRVHELFKKIQTI
LYTDPIIIYWRNDAATSDDSAEPK
>Mature_264_residues
MNRFDDCGDVVRKSILHLNDCEQWMLNASQIDEYIAVITRLYPELPDNLELLSKWISNYHFEHRLIQALADQSHPDHGRA
WNDLIRQIANQLAPKEVYAYGDRQTIMSDLIQETCLLIFKSINQFKYKSRLRTWVYTIVNNQYLQYVRKLKTRNQLKPDQ
SIDDEIGLELADRNESLESVVDFNLLHQHCIAILRQAPDPRLADIFQYYAVEELTLKQIAAKEGLSIGRVHELFKKIQTI
LYTDPIIIYWRNDAATSDDSAEPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30953; Mature: 30953

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFDDCGDVVRKSILHLNDCEQWMLNASQIDEYIAVITRLYPELPDNLELLSKWISNYH
CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FEHRLIQALADQSHPDHGRAWNDLIRQIANQLAPKEVYAYGDRQTIMSDLIQETCLLIFK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHH
SINQFKYKSRLRTWVYTIVNNQYLQYVRKLKTRNQLKPDQSIDDEIGLELADRNESLESV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCHHHHHH
VDFNLLHQHCIAILRQAPDPRLADIFQYYAVEELTLKQIAAKEGLSIGRVHELFKKIQTI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LYTDPIIIYWRNDAATSDDSAEPK
HHCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNRFDDCGDVVRKSILHLNDCEQWMLNASQIDEYIAVITRLYPELPDNLELLSKWISNYH
CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FEHRLIQALADQSHPDHGRAWNDLIRQIANQLAPKEVYAYGDRQTIMSDLIQETCLLIFK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHH
SINQFKYKSRLRTWVYTIVNNQYLQYVRKLKTRNQLKPDQSIDDEIGLELADRNESLESV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCHHHHHH
VDFNLLHQHCIAILRQAPDPRLADIFQYYAVEELTLKQIAAKEGLSIGRVHELFKKIQTI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LYTDPIIIYWRNDAATSDDSAEPK
HHCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA