Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898895

Identifier: 159898895

GI number: 159898895

Start: 3026921

End: 3027694

Strand: Reverse

Name: 159898895

Synonym: Haur_2374

Alternate gene names: NA

Gene position: 3027694-3026921 (Counterclockwise)

Preceding gene: 159898896

Following gene: 159898894

Centisome position: 47.71

GC content: 51.03

Gene sequence:

>774_bases
ATGGAGCATGTATCACATACAGCAGTTATGAATTGGCTTGCTCAGCTCAGTAATGCGACGGCTGGTTTGCTTTCTCCGCC
AACACTTTATTGGCATATCGCAACCTGCAAGCAGTGTCGGGCGCATTTGACCCTGTTAACCATAACCTCGCCCGCATTAT
CCCCACCCAGTGAACCCGCTTTATGCCAGCTTGATTTTGAAGCAATTGCGGCGTTTATTGAGGCTGAGGCAGAGCTTGGA
ACCTATCAAGCATTGCAGCAGCATAGCGCCATTTGGTGGCATTTAAGTAGTTGTCGGGCTTGTGCGGAACTCTATGCCAC
AACAGTTGCCGATCTGAGTTTAGCCCCCAAAAACGCTGTGGACTTCAAACCAATTGGGCTGGAACTGCGGTTGCCAAGCT
TTACGCCAATCCCCCGCTATCAAAAGCTATGGCCTGAATTAACGATCGCGGCGGGTCAGCTCACGGCCTTGATGCACTAT
CAACAAGCTCGTTTTCGGGCTGCTGAAGGGGATGAAGAACCTTCGGTGATTCATGAAGCCAGTGGCCCAGATTTGACGAT
CGAGGCAAGTTTGGTGTTGCAAGAAGGGATATGGCGAATCAGGCTCACCGTCGATCCGCCGATTACTGGCCGCGCCGTTG
CTGCGATCGGCGATCAGCACTTTTATGCGACCTTTGAGCATGGAGTTGCCACGTTTGATGGGTTTAATGCAGCGCTCTTT
GATGCTGATCCATCGGTATCAATGCGGGTATTTGCTGAACAATCGTTAGAATAG

Upstream 100 bases:

>100_bases
GTTAATGGCGCATTGTATGGACGGTGCCAAGCGATGTAGGCCGTATTTTTGAGGTCTTAGCAACATCTTGGATTGTAGTA
GGATTAAAGGTATACGATTT

Downstream 100 bases:

>100_bases
CTTGAGTTTTTTGATTGGTATGCTGAACGCGTAACTTTGAAACGGAGGGAGCATTGATTCCTGCAACTGCACCGAAGCCA
ATTCGTCGTTGGTTGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MEHVSHTAVMNWLAQLSNATAGLLSPPTLYWHIATCKQCRAHLTLLTITSPALSPPSEPALCQLDFEAIAAFIEAEAELG
TYQALQQHSAIWWHLSSCRACAELYATTVADLSLAPKNAVDFKPIGLELRLPSFTPIPRYQKLWPELTIAAGQLTALMHY
QQARFRAAEGDEEPSVIHEASGPDLTIEASLVLQEGIWRIRLTVDPPITGRAVAAIGDQHFYATFEHGVATFDGFNAALF
DADPSVSMRVFAEQSLE

Sequences:

>Translated_257_residues
MEHVSHTAVMNWLAQLSNATAGLLSPPTLYWHIATCKQCRAHLTLLTITSPALSPPSEPALCQLDFEAIAAFIEAEAELG
TYQALQQHSAIWWHLSSCRACAELYATTVADLSLAPKNAVDFKPIGLELRLPSFTPIPRYQKLWPELTIAAGQLTALMHY
QQARFRAAEGDEEPSVIHEASGPDLTIEASLVLQEGIWRIRLTVDPPITGRAVAAIGDQHFYATFEHGVATFDGFNAALF
DADPSVSMRVFAEQSLE
>Mature_257_residues
MEHVSHTAVMNWLAQLSNATAGLLSPPTLYWHIATCKQCRAHLTLLTITSPALSPPSEPALCQLDFEAIAAFIEAEAELG
TYQALQQHSAIWWHLSSCRACAELYATTVADLSLAPKNAVDFKPIGLELRLPSFTPIPRYQKLWPELTIAAGQLTALMHY
QQARFRAAEGDEEPSVIHEASGPDLTIEASLVLQEGIWRIRLTVDPPITGRAVAAIGDQHFYATFEHGVATFDGFNAALF
DADPSVSMRVFAEQSLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28166; Mature: 28166

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHVSHTAVMNWLAQLSNATAGLLSPPTLYWHIATCKQCRAHLTLLTITSPALSPPSEPA
CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHEEEEEEEECCCCCCCCCCC
LCQLDFEAIAAFIEAEAELGTYQALQQHSAIWWHLSSCRACAELYATTVADLSLAPKNAV
EEEECHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
DFKPIGLELRLPSFTPIPRYQKLWPELTIAAGQLTALMHYQQARFRAAEGDEEPSVIHEA
CCCCCCEEEECCCCCCCCCHHHHCCHHEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
SGPDLTIEASLVLQEGIWRIRLTVDPPITGRAVAAIGDQHFYATFEHGVATFDGFNAALF
CCCCEEEEEEEEEECCEEEEEEEECCCCCCCEEEEECCCCEEEEECCCCEEECCCCEEEE
DADPSVSMRVFAEQSLE
CCCCCCEEEEEECCCCC
>Mature Secondary Structure
MEHVSHTAVMNWLAQLSNATAGLLSPPTLYWHIATCKQCRAHLTLLTITSPALSPPSEPA
CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHEEEEEEEECCCCCCCCCCC
LCQLDFEAIAAFIEAEAELGTYQALQQHSAIWWHLSSCRACAELYATTVADLSLAPKNAV
EEEECHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
DFKPIGLELRLPSFTPIPRYQKLWPELTIAAGQLTALMHYQQARFRAAEGDEEPSVIHEA
CCCCCCEEEECCCCCCCCCHHHHCCHHEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
SGPDLTIEASLVLQEGIWRIRLTVDPPITGRAVAAIGDQHFYATFEHGVATFDGFNAALF
CCCCEEEEEEEEEECCEEEEEEEECCCCCCCEEEEECCCCEEEEECCCCEEECCCCEEEE
DADPSVSMRVFAEQSLE
CCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA