| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898871
Identifier: 159898871
GI number: 159898871
Start: 2998674
End: 2999693
Strand: Direct
Name: 159898871
Synonym: Haur_2350
Alternate gene names: NA
Gene position: 2998674-2999693 (Clockwise)
Preceding gene: 159898870
Following gene: 159898872
Centisome position: 47.25
GC content: 50.1
Gene sequence:
>1020_bases ATGCCGCCAACGCTGGCAAGTGAGTTTCGCTGTCAAGCGATCGCACCATTTGATCTGCCCTATACCAATCAGGCAAGTGC ATGGGCGGCCCAAATGCGTTGGACTCAGGGCTATCCGATTGCCCCAACCTTTGTTGCGCAGCCCTTATGGCGTTTGAGCA CCCATGGTTTTCCTGGCTTGAACAGCGACCCACACTTCGATCTAGCTCAGCTCGAACGCCAGCTTGAAGCCCATCAATTG GCCTATCTCGAAAATACGGTTGGTCATGTGGCAGTTGACAGCGTTGAACAATTGCTTGATCATACGCCATGGCTTAATGA TCGCCAGTTGTTGCCGCAAGCCTTAGGTTTTGGTTTATATGGGCCGTTGAGCTTGGGCTTGACGCTTATCGATGACCAAG AACGCCCTTTATTGGCCGATCAACGCTTGCGCGAGGTCTTGACACAACATTTACACTTACGGATTGGTTGGCTAGCTCGC GAATTGCGCATCCACGATATCCAAGGTTGGGTCTGTTTGATTGAGCCATTTTGGAATGCCCAAGCGCACCCATTTAGCTC AATTAGCCAAGCTGAGGCCTATAGTTTGCTGGCTGAAACCATTCAACATAGCCCAATTGCTTGTGGTATTGCTCCAACTG GTTCAGCTGTCGATTGGCCTTTGTTGATCAATAGCGGCATGCGGGTGTTGGTGTGCAGCAAAGAGCAACGCCAAGATTTG CTAGCTTGTGGCAAGGGCATTAATGATTATTTAGAAAATGGCGGGGCAATTATTTGGGAATGTTTGCCCAGTGATCCCGC CCAACTGGCTGAAATTCAGGTCAGTGATGTCGTCAATGAATGGACTGAATTATTACGTGAAGCACTCGATCACGATATTC TCAACAGTCGCATACTTGATGGCTCGTTATTAACTATCGCGCATGGTCTCGCTCAACACGAGCCAAGCCATGCCGATCAC GCGCTTGGCCTGTTGGCCGAGGTTAGCCGCGTCATTCGGACGCACTATAAATTGCAGTGA
Upstream 100 bases:
>100_bases GATGTGACTCCGGCGCATTTGGTAACAGCAATTATTACCGAACAAGGCATTGCCTACCCGCCCTTTGCTGAACAATTACA AACCATGGTTGAGGCTGCCA
Downstream 100 bases:
>100_bases GCGCTGCTATCCACGTAGCATAGCAGCGGTATCGTTCTCATATAGGAGTTTGTTCGTGCGGATTGTTGTAGCTGGATCAA TTGCCTACGATTACATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MPPTLASEFRCQAIAPFDLPYTNQASAWAAQMRWTQGYPIAPTFVAQPLWRLSTHGFPGLNSDPHFDLAQLERQLEAHQL AYLENTVGHVAVDSVEQLLDHTPWLNDRQLLPQALGFGLYGPLSLGLTLIDDQERPLLADQRLREVLTQHLHLRIGWLAR ELRIHDIQGWVCLIEPFWNAQAHPFSSISQAEAYSLLAETIQHSPIACGIAPTGSAVDWPLLINSGMRVLVCSKEQRQDL LACGKGINDYLENGGAIIWECLPSDPAQLAEIQVSDVVNEWTELLREALDHDILNSRILDGSLLTIAHGLAQHEPSHADH ALGLLAEVSRVIRTHYKLQ
Sequences:
>Translated_339_residues MPPTLASEFRCQAIAPFDLPYTNQASAWAAQMRWTQGYPIAPTFVAQPLWRLSTHGFPGLNSDPHFDLAQLERQLEAHQL AYLENTVGHVAVDSVEQLLDHTPWLNDRQLLPQALGFGLYGPLSLGLTLIDDQERPLLADQRLREVLTQHLHLRIGWLAR ELRIHDIQGWVCLIEPFWNAQAHPFSSISQAEAYSLLAETIQHSPIACGIAPTGSAVDWPLLINSGMRVLVCSKEQRQDL LACGKGINDYLENGGAIIWECLPSDPAQLAEIQVSDVVNEWTELLREALDHDILNSRILDGSLLTIAHGLAQHEPSHADH ALGLLAEVSRVIRTHYKLQ >Mature_338_residues PPTLASEFRCQAIAPFDLPYTNQASAWAAQMRWTQGYPIAPTFVAQPLWRLSTHGFPGLNSDPHFDLAQLERQLEAHQLA YLENTVGHVAVDSVEQLLDHTPWLNDRQLLPQALGFGLYGPLSLGLTLIDDQERPLLADQRLREVLTQHLHLRIGWLARE LRIHDIQGWVCLIEPFWNAQAHPFSSISQAEAYSLLAETIQHSPIACGIAPTGSAVDWPLLINSGMRVLVCSKEQRQDLL ACGKGINDYLENGGAIIWECLPSDPAQLAEIQVSDVVNEWTELLREALDHDILNSRILDGSLLTIAHGLAQHEPSHADHA LGLLAEVSRVIRTHYKLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37820; Mature: 37689
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTLASEFRCQAIAPFDLPYTNQASAWAAQMRWTQGYPIAPTFVAQPLWRLSTHGFPGL CCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC NSDPHFDLAQLERQLEAHQLAYLENTVGHVAVDSVEQLLDHTPWLNDRQLLPQALGFGLY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC GPLSLGLTLIDDQERPLLADQRLREVLTQHLHLRIGWLARELRIHDIQGWVCLIEPFWNA CHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCC QAHPFSSISQAEAYSLLAETIQHSPIACGIAPTGSAVDWPLLINSGMRVLVCSKEQRQDL CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHEECCCCEEEEECCHHHHHH LACGKGINDYLENGGAIIWECLPSDPAQLAEIQVSDVVNEWTELLREALDHDILNSRILD HHHCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSLLTIAHGLAQHEPSHADHALGLLAEVSRVIRTHYKLQ CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPTLASEFRCQAIAPFDLPYTNQASAWAAQMRWTQGYPIAPTFVAQPLWRLSTHGFPGL CCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC NSDPHFDLAQLERQLEAHQLAYLENTVGHVAVDSVEQLLDHTPWLNDRQLLPQALGFGLY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC GPLSLGLTLIDDQERPLLADQRLREVLTQHLHLRIGWLARELRIHDIQGWVCLIEPFWNA CHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCC QAHPFSSISQAEAYSLLAETIQHSPIACGIAPTGSAVDWPLLINSGMRVLVCSKEQRQDL CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHEECCCCEEEEECCHHHHHH LACGKGINDYLENGGAIIWECLPSDPAQLAEIQVSDVVNEWTELLREALDHDILNSRILD HHHCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSLLTIAHGLAQHEPSHADHALGLLAEVSRVIRTHYKLQ CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA