| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is mtnA [H]
Identifier: 159898870
GI number: 159898870
Start: 2997620
End: 2998696
Strand: Direct
Name: mtnA [H]
Synonym: Haur_2349
Alternate gene names: 159898870
Gene position: 2997620-2998696 (Clockwise)
Preceding gene: 159898869
Following gene: 159898871
Centisome position: 47.23
GC content: 52.46
Gene sequence:
>1077_bases ATGCAACCAATGGCTGACGTACTTAAAACTGTTTGGTGGGATGAAGTTCCCTGTTTGATCGACCAACGTCTTTTGCCAGC AACGCTGGATATTGTACGTTGTGAGGATTTAAATAGCGTGATCGAGGCGATTCGCTCAATGCAAGTGCGAGGCGCTCCAG CAATCGGCATCACGGCAGCCTATGGCATGGCCTTGGCCGCCCAACGCAGCACCGCCCAAACCAGCAGTAAATTACTCGAA AAACTAGCTAAAGCCAAAGCGCTGCTTGATGCCACGCGGCCTACGGCGATCAATCTAGCTTGGGCCACTCAGCGCATGCT TGACGTAGCCCAAGCCAATCACACACTTGAGGTTGATCAATTACGTCAGCGTTTATTGGCTGAAGCCGAGGCCATTCGCG ACCAAGACGAGGCTATGTGTCGGGCAATCGGCCAGCATGGCAAAGTACTCTTGGCCCAATCGCGCAATGTGCTGACCCAC TGCAACGCTGGTGGTTTAGCCACGGCAGCCTATGGCACGGCGCTCGCACCAATTCGCGCAGTCCATGAAGATGGGCAGCC AATTCATGTTTGGGTCGATGAAACGCGGCCATTTTTGCAGGGCGCACGACTCACCGCGTGGGAATTGCAACAGGCAGGCA TCGATTTAACCTTAATTACCGATAACATGGCTGCTTATTTTATGCAGCAAGGCCAGGTTGATTGTATTATCGTTGGCTCG GATCGGATTGCGGCAAATGGCGATGTTGCCAATAAAATCGGCACTTATGGGCTGGCAGTGTTAGCCAAAGCGCACAATAT TCCACTGTATGTTGCTGCGCCAACATCGACCATTGATTTGCAGACCGCCGATGGCGCGGCAATTCCAATCGAACAACGTT CAACCCAAGAAGTAACCCATATTGGGCAACAGGCAATTGCGGCAGCAGGCATTAAGGTGGCGCATCCGGCTTTTGATGTG ACTCCGGCGCATTTGGTAACAGCAATTATTACCGAACAAGGCATTGCCTACCCGCCCTTTGCTGAACAATTACAAACCAT GGTTGAGGCTGCCAATGCCGCCAACGCTGGCAAGTGA
Upstream 100 bases:
>100_bases CCCGGCAACCCCATTATTTGGAAGGTGCCAAATCCTGCAGGTTCGGCCTGATAGATGAGTTTGAGCATGCGGGCCTCTCT CTGAGAGGTTTTTTTGTGTA
Downstream 100 bases:
>100_bases GTTTCGCTGTCAAGCGATCGCACCATTTGATCTGCCCTATACCAATCAGGCAAGTGCATGGGCGGCCCAAATGCGTTGGA CTCAGGGCTATCCGATTGCC
Product: aIF-2BI family translation initiation factor
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MQPMADVLKTVWWDEVPCLIDQRLLPATLDIVRCEDLNSVIEAIRSMQVRGAPAIGITAAYGMALAAQRSTAQTSSKLLE KLAKAKALLDATRPTAINLAWATQRMLDVAQANHTLEVDQLRQRLLAEAEAIRDQDEAMCRAIGQHGKVLLAQSRNVLTH CNAGGLATAAYGTALAPIRAVHEDGQPIHVWVDETRPFLQGARLTAWELQQAGIDLTLITDNMAAYFMQQGQVDCIIVGS DRIAANGDVANKIGTYGLAVLAKAHNIPLYVAAPTSTIDLQTADGAAIPIEQRSTQEVTHIGQQAIAAAGIKVAHPAFDV TPAHLVTAIITEQGIAYPPFAEQLQTMVEAANAANAGK
Sequences:
>Translated_358_residues MQPMADVLKTVWWDEVPCLIDQRLLPATLDIVRCEDLNSVIEAIRSMQVRGAPAIGITAAYGMALAAQRSTAQTSSKLLE KLAKAKALLDATRPTAINLAWATQRMLDVAQANHTLEVDQLRQRLLAEAEAIRDQDEAMCRAIGQHGKVLLAQSRNVLTH CNAGGLATAAYGTALAPIRAVHEDGQPIHVWVDETRPFLQGARLTAWELQQAGIDLTLITDNMAAYFMQQGQVDCIIVGS DRIAANGDVANKIGTYGLAVLAKAHNIPLYVAAPTSTIDLQTADGAAIPIEQRSTQEVTHIGQQAIAAAGIKVAHPAFDV TPAHLVTAIITEQGIAYPPFAEQLQTMVEAANAANAGK >Mature_358_residues MQPMADVLKTVWWDEVPCLIDQRLLPATLDIVRCEDLNSVIEAIRSMQVRGAPAIGITAAYGMALAAQRSTAQTSSKLLE KLAKAKALLDATRPTAINLAWATQRMLDVAQANHTLEVDQLRQRLLAEAEAIRDQDEAMCRAIGQHGKVLLAQSRNVLTH CNAGGLATAAYGTALAPIRAVHEDGQPIHVWVDETRPFLQGARLTAWELQQAGIDLTLITDNMAAYFMQQGQVDCIIVGS DRIAANGDVANKIGTYGLAVLAKAHNIPLYVAAPTSTIDLQTADGAAIPIEQRSTQEVTHIGQQAIAAAGIKVAHPAFDV TPAHLVTAIITEQGIAYPPFAEQLQTMVEAANAANAGK
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=340, Percent_Identity=43.2352941176471, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI23943880, Length=331, Percent_Identity=38.9728096676737, Blast_Score=185, Evalue=4e-47, Organism=Homo sapiens, GI4503503, Length=231, Percent_Identity=27.7056277056277, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI7657058, Length=167, Percent_Identity=33.5329341317365, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI78000158, Length=174, Percent_Identity=28.1609195402299, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI78000156, Length=174, Percent_Identity=28.1609195402299, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI187607323, Length=174, Percent_Identity=28.1609195402299, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17557462, Length=333, Percent_Identity=38.1381381381381, Blast_Score=220, Evalue=9e-58, Organism=Caenorhabditis elegans, GI17557123, Length=280, Percent_Identity=26.0714285714286, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6325375, Length=379, Percent_Identity=33.7730870712401, Blast_Score=171, Evalue=2e-43, Organism=Drosophila melanogaster, GI21357667, Length=350, Percent_Identity=40.8571428571429, Blast_Score=254, Evalue=5e-68, Organism=Drosophila melanogaster, GI24651647, Length=350, Percent_Identity=40.8571428571429, Blast_Score=254, Evalue=5e-68, Organism=Drosophila melanogaster, GI21358605, Length=221, Percent_Identity=23.0769230769231, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 38266; Mature: 38266
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPMADVLKTVWWDEVPCLIDQRLLPATLDIVRCEDLNSVIEAIRSMQVRGAPAIGITAA CCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCHHHHH YGMALAAQRSTAQTSSKLLEKLAKAKALLDATRPTAINLAWATQRMLDVAQANHTLEVDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHH LRQRLLAEAEAIRDQDEAMCRAIGQHGKVLLAQSRNVLTHCNAGGLATAAYGTALAPIRA HHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHH VHEDGQPIHVWVDETRPFLQGARLTAWELQQAGIDLTLITDNMAAYFMQQGQVDCIIVGS HHCCCCEEEEEECCCCHHHCCCCCHHHHHHHCCCEEEEEECHHHHHHHHCCCEEEEEECC DRIAANGDVANKIGTYGLAVLAKAHNIPLYVAAPTSTIDLQTADGAAIPIEQRSTQEVTH CCEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHH IGQQAIAAAGIKVAHPAFDVTPAHLVTAIITEQGIAYPPFAEQLQTMVEAANAANAGK HHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQPMADVLKTVWWDEVPCLIDQRLLPATLDIVRCEDLNSVIEAIRSMQVRGAPAIGITAA CCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCHHHHH YGMALAAQRSTAQTSSKLLEKLAKAKALLDATRPTAINLAWATQRMLDVAQANHTLEVDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHH LRQRLLAEAEAIRDQDEAMCRAIGQHGKVLLAQSRNVLTHCNAGGLATAAYGTALAPIRA HHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHH VHEDGQPIHVWVDETRPFLQGARLTAWELQQAGIDLTLITDNMAAYFMQQGQVDCIIVGS HHCCCCEEEEEECCCCHHHCCCCCHHHHHHHCCCEEEEEECHHHHHHHHCCCEEEEEECC DRIAANGDVANKIGTYGLAVLAKAHNIPLYVAAPTSTIDLQTADGAAIPIEQRSTQEVTH CCEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHH IGQQAIAAAGIKVAHPAFDVTPAHLVTAIITEQGIAYPPFAEQLQTMVEAANAANAGK HHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA