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The map label for this gene is nrtA [H]

Identifier: 159898857

GI number: 159898857

Start: 2983555

End: 2984778

Strand: Direct

Name: nrtA [H]

Synonym: Haur_2336

Alternate gene names: 159898857

Gene position: 2983555-2984778 (Clockwise)

Preceding gene: 159898856

Following gene: 159898858

Centisome position: 47.01

GC content: 52.29

Gene sequence:

>1224_bases
ATGTCAAAAATCAGCCGTCGCAATTTTCTTAAAACCGCAGCTTCACTTGGTGCTGCCGTTGCCATGCCCAGCTTTTTGAC
CGCCTGTGGTGGTAGCGAAAGTGCTAGCGAAACTGGTGAGCGCCCAATCAAAATTGGCTTTATTCCGCTGACCGACTGTG
CTTCGGTGGTGATGGCACATACCTTGGGCTTATACCAAAAATATGGGGTTAACGTTGAGGTGGTTAAAGAGGCTTCGTGG
GCCAATGTACGCGATAAGCTGTTAACTGGCGACCTCGATGCTGCCCACTGTTTGTTTGGAATGCCCTTCTCGGTCTACAC
TGGTGTTGGCGGCAAGGCCGAAAGCGAACTCAAAATTGCCATGATTTTGAACCAAAATGGTCAAGGCATTACGCTCAGCA
GTGCCCTCGCCAAAGAGGTGGGGTATGGCGACCCCAGCAAACTCAAAGCGCTGATCAGCCAACGCCCTGCTGATAAACCC
GCCACCTTTGCAGGCACCTTCCCAGGCGGAACCCACGATATTTGGCTGCGCTACTGGCTTGCTGCCGCTGGCGTTGATCA
AAATAGCGTCAAAATTATCACAATTCCACCACCGCAAATGGTTGCCAATATGCGCATCGGCGAGATGGATGGCTTCTGCG
TGGGCGAGCCATGGAACGGGGTCGCAGTCAAAGAGGGCATTGGCGAAACTGTGTTAGCAACCCAAGATCTGTGGGCGGGA
CACCCAGAGAAAGCCTTGGTGGTCAATCCAAGTTTTGCCGAAAAACGCCGCGATGACCTCAAGAAAATCATGAAGGCCAT
CCTTGAGGCCTCAAAATGGCTTGACGATTTCAATAATCGTAGCGAAGCCGCTAAAGTTATTGGCGGTCAAGCCTATGTCA
ACGCTCCAGCCGATGTGATCGAAGCGCGTTTGAAGGGCCAATACAACCTTGGGGCAACCTTAGGCGAACGCACGTTTGAG
CCAAGCAAAAGCATGGTTTTTTATCAGGATGGTGCGGTCAATGCGCCGCAACGCAGCCATGCAATTTGGTTTATGGCCCA
GTATGTGCGCTTTGGCCTCTTGCCAAGCGCTCCCGACTACACCGCCATCGCCGACAAGTTGATTATGCGTGATTTGTATG
CTGAAGTCGCCAAAGAAATGAGCCTCACCGTGGCAGGCGACGATTTACAGCCATTCACCGTCACGCTCGATCAACAAACC
TTCGATCCCAAAAGCCCATCCTAG

Upstream 100 bases:

>100_bases
GTGGGTGAATCGTGCCCAATTATTGATCTAACGACTAGATGAATAATTGCTATCTCCCAAGCGTTTGATGTGTGCCACAG
GTTTCACGGAGGAGCTTCCA

Downstream 100 bases:

>100_bases
CCCGCAGGCCATCACGACACACCTTCGCGACTGAAGTAACACGGCTTCAGTCGCTGACACACCAGCCACTCGATTGCCAA
CCAGACAAGGAGCACTTCCA

Product: NO3-/NO2-ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSKISRRNFLKTAASLGAAVAMPSFLTACGGSESASETGERPIKIGFIPLTDCASVVMAHTLGLYQKYGVNVEVVKEASW
ANVRDKLLTGDLDAAHCLFGMPFSVYTGVGGKAESELKIAMILNQNGQGITLSSALAKEVGYGDPSKLKALISQRPADKP
ATFAGTFPGGTHDIWLRYWLAAAGVDQNSVKIITIPPPQMVANMRIGEMDGFCVGEPWNGVAVKEGIGETVLATQDLWAG
HPEKALVVNPSFAEKRRDDLKKIMKAILEASKWLDDFNNRSEAAKVIGGQAYVNAPADVIEARLKGQYNLGATLGERTFE
PSKSMVFYQDGAVNAPQRSHAIWFMAQYVRFGLLPSAPDYTAIADKLIMRDLYAEVAKEMSLTVAGDDLQPFTVTLDQQT
FDPKSPS

Sequences:

>Translated_407_residues
MSKISRRNFLKTAASLGAAVAMPSFLTACGGSESASETGERPIKIGFIPLTDCASVVMAHTLGLYQKYGVNVEVVKEASW
ANVRDKLLTGDLDAAHCLFGMPFSVYTGVGGKAESELKIAMILNQNGQGITLSSALAKEVGYGDPSKLKALISQRPADKP
ATFAGTFPGGTHDIWLRYWLAAAGVDQNSVKIITIPPPQMVANMRIGEMDGFCVGEPWNGVAVKEGIGETVLATQDLWAG
HPEKALVVNPSFAEKRRDDLKKIMKAILEASKWLDDFNNRSEAAKVIGGQAYVNAPADVIEARLKGQYNLGATLGERTFE
PSKSMVFYQDGAVNAPQRSHAIWFMAQYVRFGLLPSAPDYTAIADKLIMRDLYAEVAKEMSLTVAGDDLQPFTVTLDQQT
FDPKSPS
>Mature_406_residues
SKISRRNFLKTAASLGAAVAMPSFLTACGGSESASETGERPIKIGFIPLTDCASVVMAHTLGLYQKYGVNVEVVKEASWA
NVRDKLLTGDLDAAHCLFGMPFSVYTGVGGKAESELKIAMILNQNGQGITLSSALAKEVGYGDPSKLKALISQRPADKPA
TFAGTFPGGTHDIWLRYWLAAAGVDQNSVKIITIPPPQMVANMRIGEMDGFCVGEPWNGVAVKEGIGETVLATQDLWAGH
PEKALVVNPSFAEKRRDDLKKIMKAILEASKWLDDFNNRSEAAKVIGGQAYVNAPADVIEARLKGQYNLGATLGERTFEP
SKSMVFYQDGAVNAPQRSHAIWFMAQYVRFGLLPSAPDYTAIADKLIMRDLYAEVAKEMSLTVAGDDLQPFTVTLDQQTF
DPKSPS

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43931; Mature: 43800

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKISRRNFLKTAASLGAAVAMPSFLTACGGSESASETGERPIKIGFIPLTDCASVVMAH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEEEHHHHHHHHHHH
TLGLYQKYGVNVEVVKEASWANVRDKLLTGDLDAAHCLFGMPFSVYTGVGGKAESELKIA
HHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCCCCCEEEE
MILNQNGQGITLSSALAKEVGYGDPSKLKALISQRPADKPATFAGTFPGGTHDIWLRYWL
EEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH
AAAGVDQNSVKIITIPPPQMVANMRIGEMDGFCVGEPWNGVAVKEGIGETVLATQDLWAG
HHCCCCCCCEEEEEECCHHHHHCCEECCCCCEEECCCCCCEEHHCCCCCHHEEEHHHHCC
HPEKALVVNPSFAEKRRDDLKKIMKAILEASKWLDDFNNRSEAAKVIGGQAYVNAPADVI
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCHHHH
EARLKGQYNLGATLGERTFEPSKSMVFYQDGAVNAPQRSHAIWFMAQYVRFGLLPSAPDY
HHHHCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
TAIADKLIMRDLYAEVAKEMSLTVAGDDLQPFTVTLDQQTFDPKSPS
HHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SKISRRNFLKTAASLGAAVAMPSFLTACGGSESASETGERPIKIGFIPLTDCASVVMAH
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEEEHHHHHHHHHHH
TLGLYQKYGVNVEVVKEASWANVRDKLLTGDLDAAHCLFGMPFSVYTGVGGKAESELKIA
HHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCCCCCEEEE
MILNQNGQGITLSSALAKEVGYGDPSKLKALISQRPADKPATFAGTFPGGTHDIWLRYWL
EEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH
AAAGVDQNSVKIITIPPPQMVANMRIGEMDGFCVGEPWNGVAVKEGIGETVLATQDLWAG
HHCCCCCCCEEEEEECCHHHHHCCEECCCCCEEECCCCCCEEHHCCCCCHHEEEHHHHCC
HPEKALVVNPSFAEKRRDDLKKIMKAILEASKWLDDFNNRSEAAKVIGGQAYVNAPADVI
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCHHHH
EARLKGQYNLGATLGERTFEPSKSMVFYQDGAVNAPQRSHAIWFMAQYVRFGLLPSAPDY
HHHHCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
TAIADKLIMRDLYAEVAKEMSLTVAGDDLQPFTVTLDQQTFDPKSPS
HHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8437564 [H]