| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is nrtB [H]
Identifier: 159898858
GI number: 159898858
Start: 2984878
End: 2985726
Strand: Direct
Name: nrtB [H]
Synonym: Haur_2337
Alternate gene names: 159898858
Gene position: 2984878-2985726 (Clockwise)
Preceding gene: 159898857
Following gene: 159898859
Centisome position: 47.03
GC content: 52.89
Gene sequence:
>849_bases ATGGCACAAATGATCGAAGTTATTCCACGGCGTGAGAGTTCAGCGCCAACCCTCATCCGCCGCTGGCTCAACGCAATTTG GCAAACACTTAGCCCAGTTTTGATGGGAATGTTGATTTTGGCCGGGTTATGGCAAGTTGCGGCATGGATTTCTGGCGGCA CATTGCCAACCCCGCTGGCAACCGCCAGCACCTTACGTGAGCTTTTGAGCGATCCCTTCTACGACAACGGACCCAATGAT AAAGGCATCGGGATTCAGTTGATGGCTTCGTTGGGGCGGGTCTTCACTGGCTGGGGGATTGGCATCGCGATCGCCATCCC ACTAGGTATGTTGCTTGGAAGTAGTGCTGCGCTGCGCAAAATGCTGGCTCCAGTCATCGAGATTTTGCGGCCTGTCTCGC CGTTGGCATGGTATCCGTTGGGATTGGCAGTGCTGCATAATGCGCCCAAAGCTGTGGTTTTTGCGATTGTGATCACCTCG CTTTGGCCAACCTTGGTCAACACCACCATGGGCGTGCAAAATATTCCTGCCGACCTCAAGGCTGTTTCCAAGGTCTTTCG GTTTAGTCGTTGGCGCTATATCAGCAAAGTGTTGTTGCCCGCAGCTTTTCCAGCCATTTTAACTGGCATGCGGCTCTCGA TGGGGATTGCCTGGATGGTGATTGTGGCAGGCGAGATGTTGGCTGGGGGCACAGGTTTGGGCTTCTTCGTTTGGGATTCA TGGAACGCGCTTTCGTTGGAACGGGTTATGAGTGCTATTTTGGTTATCGGGATTACCGGTTTAGCCCTGGATCGTTTGTT TAGTTTGATTGGTCAACGTATGGCCGCTTGGCAAGAAGGAGGTCACTAA
Upstream 100 bases:
>100_bases GCCCGCAGGCCATCACGACACACCTTCGCGACTGAAGTAACACGGCTTCAGTCGCTGACACACCAGCCACTCGATTGCCA ACCAGACAAGGAGCACTTCC
Downstream 100 bases:
>100_bases TGGCTCCACGTTTGTTACCGCGCACCACGCCCAACACCGCAATTCTACCGATGGAGCCTGCTCCGCTGCTTGAAATTAGC AGCGTGGGCAAAAATTATCC
Product: nitrate ABC transporter inner membrane subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAQMIEVIPRRESSAPTLIRRWLNAIWQTLSPVLMGMLILAGLWQVAAWISGGTLPTPLATASTLRELLSDPFYDNGPND KGIGIQLMASLGRVFTGWGIGIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVLHNAPKAVVFAIVITS LWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGIAWMVIVAGEMLAGGTGLGFFVWDS WNALSLERVMSAILVIGITGLALDRLFSLIGQRMAAWQEGGH
Sequences:
>Translated_282_residues MAQMIEVIPRRESSAPTLIRRWLNAIWQTLSPVLMGMLILAGLWQVAAWISGGTLPTPLATASTLRELLSDPFYDNGPND KGIGIQLMASLGRVFTGWGIGIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVLHNAPKAVVFAIVITS LWPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGIAWMVIVAGEMLAGGTGLGFFVWDS WNALSLERVMSAILVIGITGLALDRLFSLIGQRMAAWQEGGH >Mature_281_residues AQMIEVIPRRESSAPTLIRRWLNAIWQTLSPVLMGMLILAGLWQVAAWISGGTLPTPLATASTLRELLSDPFYDNGPNDK GIGIQLMASLGRVFTGWGIGIAIAIPLGMLLGSSAALRKMLAPVIEILRPVSPLAWYPLGLAVLHNAPKAVVFAIVITSL WPTLVNTTMGVQNIPADLKAVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGIAWMVIVAGEMLAGGTGLGFFVWDSW NALSLERVMSAILVIGITGLALDRLFSLIGQRMAAWQEGGH
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=216, Percent_Identity=29.1666666666667, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI87081802, Length=164, Percent_Identity=25.609756097561, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30454; Mature: 30323
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQMIEVIPRRESSAPTLIRRWLNAIWQTLSPVLMGMLILAGLWQVAAWISGGTLPTPLA CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH TASTLRELLSDPFYDNGPNDKGIGIQLMASLGRVFTGWGIGIAIAIPLGMLLGSSAALRK HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH MLAPVIEILRPVSPLAWYPLGLAVLHNAPKAVVFAIVITSLWPTLVNTTMGVQNIPADLK HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGIAWMVIVAGEMLAGGTGLGFFVWDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC WNALSLERVMSAILVIGITGLALDRLFSLIGQRMAAWQEGGH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AQMIEVIPRRESSAPTLIRRWLNAIWQTLSPVLMGMLILAGLWQVAAWISGGTLPTPLA CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH TASTLRELLSDPFYDNGPNDKGIGIQLMASLGRVFTGWGIGIAIAIPLGMLLGSSAALRK HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH MLAPVIEILRPVSPLAWYPLGLAVLHNAPKAVVFAIVITSLWPTLVNTTMGVQNIPADLK HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AVSKVFRFSRWRYISKVLLPAAFPAILTGMRLSMGIAWMVIVAGEMLAGGTGLGFFVWDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC WNALSLERVMSAILVIGITGLALDRLFSLIGQRMAAWQEGGH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]