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The map label for this gene is yeaM [C]

Identifier: 159898839

GI number: 159898839

Start: 2960031

End: 2960867

Strand: Direct

Name: yeaM [C]

Synonym: Haur_2318

Alternate gene names: 159898839

Gene position: 2960031-2960867 (Clockwise)

Preceding gene: 159898833

Following gene: 159898840

Centisome position: 46.64

GC content: 48.75

Gene sequence:

>837_bases
ATGAGTTTGGTTAGCCTGCCAGTCAATCGTGCGTTACGCCCATTGATTCGTTCGATCGTCTTGCATCAAGCACATGGATC
TGAAGCCTCAGCCTATCCGGTCTTGCCAACGCCATTTCCGGTGGCAGGAATCCAATATCAAGGGCGTTTGGGCGTACATC
AGCAGCCAACAAATACGTTTAAACACTTAAATCGCCTAGGCTTGACGGGATTACAATCAACAATTCGCCAATTTCAGCCT
GACCAACAAACCCAAACAATCTTGCTGGTTTTTCAACCATACGGCGTATTTGCTAGTTTCAAGCATACGATGGCCGATTT
GCACGATCAGCATGTGCCATTGCACGAATTTATAGCCGCGAGCCAGCTCGAATATCTGATTGAGCAAATCGACACGCTGG
CCTTACAATCGGCTGATTTAACCAGCGTTGCCGAACTAGTCAGTCAATTTGTATATGATCAACTCATGCCACAAGCCTGC
TCACCCCATGCTAGCCTCATCAATGCAGTAAATATTCTGCTAGCAGCCAAGGGCACATATCCGATTAGCCAGCTTGCGCG
TGAGGTCAACCTCAGTCGGCGACAACTAGAACGGCTATTCAAACAGCAAATTGGCTTGCAACCGAAGGCCTATGCCAGCT
TAGTGCAATTTGATCAGGCGCTGAGATCATTGGCCAAACGTAATTCTTGGGCTAGCCTTGCCCATGATTCGGGCTACGCT
GATCAAGCCCATTTTATTCGCCAATTTGCTGCCCGCGTCGGTCAATCGCCAGCAGCCTATGCAGCCACAAGCAAGGATGT
CGCATTTCTTCAATCATTGCTGTTGGCCGAGAACTAA

Upstream 100 bases:

>100_bases
GGGATAAATATCAGGAATTTGTGGATGATTGAACAATCAACCTATGGCAGCTAAAATACGATCTTGAATCCATCATCATC
ACGCCATACGAGGAGCCTGC

Downstream 100 bases:

>100_bases
ACTTGCTCCATAGCATTCTGTTATGGAGCAACACCATGTCAACGTTTGATCAAACACTGCTGCAAGCCTGTGCCGAGAGC
ACCCTCAACGGAACCTTACC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Arac Family; Arac/Xyls Family Transcriptional Regulator; Helix-Turn-Helix- Domain Containing Protein AraC Type; Arabinose Operon Regulatory Protein; Helix-Turn-Helix AraC Domain Protein

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSLVSLPVNRALRPLIRSIVLHQAHGSEASAYPVLPTPFPVAGIQYQGRLGVHQQPTNTFKHLNRLGLTGLQSTIRQFQP
DQQTQTILLVFQPYGVFASFKHTMADLHDQHVPLHEFIAASQLEYLIEQIDTLALQSADLTSVAELVSQFVYDQLMPQAC
SPHASLINAVNILLAAKGTYPISQLAREVNLSRRQLERLFKQQIGLQPKAYASLVQFDQALRSLAKRNSWASLAHDSGYA
DQAHFIRQFAARVGQSPAAYAATSKDVAFLQSLLLAEN

Sequences:

>Translated_278_residues
MSLVSLPVNRALRPLIRSIVLHQAHGSEASAYPVLPTPFPVAGIQYQGRLGVHQQPTNTFKHLNRLGLTGLQSTIRQFQP
DQQTQTILLVFQPYGVFASFKHTMADLHDQHVPLHEFIAASQLEYLIEQIDTLALQSADLTSVAELVSQFVYDQLMPQAC
SPHASLINAVNILLAAKGTYPISQLAREVNLSRRQLERLFKQQIGLQPKAYASLVQFDQALRSLAKRNSWASLAHDSGYA
DQAHFIRQFAARVGQSPAAYAATSKDVAFLQSLLLAEN
>Mature_277_residues
SLVSLPVNRALRPLIRSIVLHQAHGSEASAYPVLPTPFPVAGIQYQGRLGVHQQPTNTFKHLNRLGLTGLQSTIRQFQPD
QQTQTILLVFQPYGVFASFKHTMADLHDQHVPLHEFIAASQLEYLIEQIDTLALQSADLTSVAELVSQFVYDQLMPQACS
PHASLINAVNILLAAKGTYPISQLAREVNLSRRQLERLFKQQIGLQPKAYASLVQFDQALRSLAKRNSWASLAHDSGYAD
QAHFIRQFAARVGQSPAAYAATSKDVAFLQSLLLAEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30790; Mature: 30658

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVSLPVNRALRPLIRSIVLHQAHGSEASAYPVLPTPFPVAGIQYQGRLGVHQQPTNTF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHH
KHLNRLGLTGLQSTIRQFQPDQQTQTILLVFQPYGVFASFKHTMADLHDQHVPLHEFIAA
HHHHHHCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
SQLEYLIEQIDTLALQSADLTSVAELVSQFVYDQLMPQACSPHASLINAVNILLAAKGTY
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PISQLAREVNLSRRQLERLFKQQIGLQPKAYASLVQFDQALRSLAKRNSWASLAHDSGYA
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
DQAHFIRQFAARVGQSPAAYAATSKDVAFLQSLLLAEN
HHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLVSLPVNRALRPLIRSIVLHQAHGSEASAYPVLPTPFPVAGIQYQGRLGVHQQPTNTF
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHH
KHLNRLGLTGLQSTIRQFQPDQQTQTILLVFQPYGVFASFKHTMADLHDQHVPLHEFIAA
HHHHHHCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
SQLEYLIEQIDTLALQSADLTSVAELVSQFVYDQLMPQACSPHASLINAVNILLAAKGTY
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PISQLAREVNLSRRQLERLFKQQIGLQPKAYASLVQFDQALRSLAKRNSWASLAHDSGYA
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
DQAHFIRQFAARVGQSPAAYAATSKDVAFLQSLLLAEN
HHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA