| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898833
Identifier: 159898833
GI number: 159898833
Start: 2952491
End: 2953240
Strand: Direct
Name: 159898833
Synonym: Haur_2312
Alternate gene names: NA
Gene position: 2952491-2953240 (Clockwise)
Preceding gene: 159898832
Following gene: 159898839
Centisome position: 46.52
GC content: 35.6
Gene sequence:
>750_bases ATGTTATGGAAAGACATTACTTCAAATAAACGAGAATATGCGATTCCATCTCAAGGGATTTTAGTTATTGAAACAGAAAA TGATATAGCAGAGTATACGTATCTTAAATCTTTAAGGTTCATTCAAGAAGGTTTTTATGCACCTAGTATTAAAATAGAAT TATATTTTCATATACCCACAATAAAATATGATACCGTTGAGAATGTTATTATTCAAAAAGATAGTTCAATTACAGGTTTC ATCGACAAGATTAACAATCAAGGCTATATAACTATGCTCAGATATCTACTTATTGCCACATATCATGCTCTTGTTGTGCC TGAAACTAGTAAGCCGACGCATGGATCAAGATATTCTTACAGAGGTCAGAGCAGCAACAATTATTATAGTGATTCGCGCA GATCATTGCCTAGAACAAAAGGGGAATCCAATCGGGTAAGTATTCATAATTGGCATCAAAGTCTATCAAAATCACAGCAT ATAGTTGTCGCACATAAACGATTTATTGAGGATGGTTACGATGCACCCCATGATAAATATCTACAAGCCAAAGCAGCAGG GGTTATCCTTGAGTTGGGTTATACATGGGTTCAAGAACACACACGAGGCGGTATAGATTCACATCCAAATAATAATCAAG CTCTAGTAACAAGATTTGAAACACCAGTATCCGTTACCAGTAATATACGAAAATGCTTACCCTCGGCCTCAGCTTCATTG CAACAACCCAAACCCAAAAAAAGAAGATAG
Upstream 100 bases:
>100_bases CCTTGAAATCATTGAAACCAAAAATACTACTTCGATTTTAGCAAGCTACTTTAATAAGCTCTATGTCAAAAATGATCACT TTTTATTAGATAGAGTAAGT
Downstream 100 bases:
>100_bases TAGAGATGTGGATATGGTAATGAATTATCAGTCACTTAGCGACAATGCAATTACCTGCATCGCGTGACAACACTCATAGC ACACGATGCAGGTAGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLWKDITSNKREYAIPSQGILVIETENDIAEYTYLKSLRFIQEGFYAPSIKIELYFHIPTIKYDTVENVIIQKDSSITGF IDKINNQGYITMLRYLLIATYHALVVPETSKPTHGSRYSYRGQSSNNYYSDSRRSLPRTKGESNRVSIHNWHQSLSKSQH IVVAHKRFIEDGYDAPHDKYLQAKAAGVILELGYTWVQEHTRGGIDSHPNNNQALVTRFETPVSVTSNIRKCLPSASASL QQPKPKKRR
Sequences:
>Translated_249_residues MLWKDITSNKREYAIPSQGILVIETENDIAEYTYLKSLRFIQEGFYAPSIKIELYFHIPTIKYDTVENVIIQKDSSITGF IDKINNQGYITMLRYLLIATYHALVVPETSKPTHGSRYSYRGQSSNNYYSDSRRSLPRTKGESNRVSIHNWHQSLSKSQH IVVAHKRFIEDGYDAPHDKYLQAKAAGVILELGYTWVQEHTRGGIDSHPNNNQALVTRFETPVSVTSNIRKCLPSASASL QQPKPKKRR >Mature_249_residues MLWKDITSNKREYAIPSQGILVIETENDIAEYTYLKSLRFIQEGFYAPSIKIELYFHIPTIKYDTVENVIIQKDSSITGF IDKINNQGYITMLRYLLIATYHALVVPETSKPTHGSRYSYRGQSSNNYYSDSRRSLPRTKGESNRVSIHNWHQSLSKSQH IVVAHKRFIEDGYDAPHDKYLQAKAAGVILELGYTWVQEHTRGGIDSHPNNNQALVTRFETPVSVTSNIRKCLPSASASL QQPKPKKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28564; Mature: 28564
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWKDITSNKREYAIPSQGILVIETENDIAEYTYLKSLRFIQEGFYAPSIKIELYFHIPT CCCCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC IKYDTVENVIIQKDSSITGFIDKINNQGYITMLRYLLIATYHALVVPETSKPTHGSRYSY EEECCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEE RGQSSNNYYSDSRRSLPRTKGESNRVSIHNWHQSLSKSQHIVVAHKRFIEDGYDAPHDKY CCCCCCCCCCCHHHCCCCCCCCCCCEEHHHHHHHHCCCCEEEEEHHHHHHCCCCCCHHHH LQAKAAGVILELGYTWVQEHTRGGIDSHPNNNQALVTRFETPVSVTSNIRKCLPSASASL HHHHHCEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCC QQPKPKKRR CCCCCCCCC >Mature Secondary Structure MLWKDITSNKREYAIPSQGILVIETENDIAEYTYLKSLRFIQEGFYAPSIKIELYFHIPT CCCCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC IKYDTVENVIIQKDSSITGFIDKINNQGYITMLRYLLIATYHALVVPETSKPTHGSRYSY EEECCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEE RGQSSNNYYSDSRRSLPRTKGESNRVSIHNWHQSLSKSQHIVVAHKRFIEDGYDAPHDKY CCCCCCCCCCCHHHCCCCCCCCCCCEEHHHHHHHHCCCCEEEEEHHHHHHCCCCCCHHHH LQAKAAGVILELGYTWVQEHTRGGIDSHPNNNQALVTRFETPVSVTSNIRKCLPSASASL HHHHHCEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCC QQPKPKKRR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA