| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898832
Identifier: 159898832
GI number: 159898832
Start: 2951637
End: 2952275
Strand: Direct
Name: 159898832
Synonym: Haur_2311
Alternate gene names: NA
Gene position: 2951637-2952275 (Clockwise)
Preceding gene: 159898828
Following gene: 159898833
Centisome position: 46.51
GC content: 26.92
Gene sequence:
>639_bases ATGACTGATGCAATTGAGCAATTAGCCAGCAAACTCTCAGTTGAGAACACAGAGATCGAGGATTTTCTTCAAGAGTTAAG TGTTCGGTTTGATCAATCAGTCACGGCAGAAGAGGTGTTAGGGTTGATCGAACCATTTAAGAAAATTTTCAGTTTCGCTA CTCTTACTCAGCATATAGAACAAAAATTAATAAATAACTATATACATAAAAATAATCACTTAATTAATGAATTCAAAAAC AAGAAACTTGATAATATAAATTTATTTAAATCAAGAATTATTTTATATAATAAGATAACAAATTATTCTAACAAGGATAT CTTTGAACTACATATATTCCTTAATAAAAATCGTTATATTACTGACTTGCACCTCAAAGATACAATTACTTATCTATCAA AAATGAATATAGTCCAAACCTACACTTTTGAGTATATTCAGCTAGTTGCAAAGTTTCGAAAACCAAACTTCCCGTTTAAG AATCCAGATCTATTAATAAACAACATTTTCTATAAAACAGGATTAAAGATTAATATTCAACAACTATTAAGTATAGTAGA AAATTACAACACAGCCTTCGAGTTTCTTGATTATTGCTATATATATATATTTATATATTATAAAATTTACATCACGTAA
Upstream 100 bases:
>100_bases GCAAAATCAGGCTTGACGCTGGATTTTGAATGTAGTATATACAGTAGACATGTGTTAGGCACTGGTGCGAAGCGCGGTTT TAGCTTGCTGGAGTACAACT
Downstream 100 bases:
>100_bases AAAATATCCCTAAATATTTATTACGCATACCAAAGAGATTTGAATCTTTCAAAGCTTCTCTAGATCAATCTAGTAATAAT AGATTATCAAATAATTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTDAIEQLASKLSVENTEIEDFLQELSVRFDQSVTAEEVLGLIEPFKKIFSFATLTQHIEQKLINNYIHKNNHLINEFKN KKLDNINLFKSRIILYNKITNYSNKDIFELHIFLNKNRYITDLHLKDTITYLSKMNIVQTYTFEYIQLVAKFRKPNFPFK NPDLLINNIFYKTGLKINIQQLLSIVENYNTAFEFLDYCYIYIFIYYKIYIT
Sequences:
>Translated_212_residues MTDAIEQLASKLSVENTEIEDFLQELSVRFDQSVTAEEVLGLIEPFKKIFSFATLTQHIEQKLINNYIHKNNHLINEFKN KKLDNINLFKSRIILYNKITNYSNKDIFELHIFLNKNRYITDLHLKDTITYLSKMNIVQTYTFEYIQLVAKFRKPNFPFK NPDLLINNIFYKTGLKINIQQLLSIVENYNTAFEFLDYCYIYIFIYYKIYIT >Mature_211_residues TDAIEQLASKLSVENTEIEDFLQELSVRFDQSVTAEEVLGLIEPFKKIFSFATLTQHIEQKLINNYIHKNNHLINEFKNK KLDNINLFKSRIILYNKITNYSNKDIFELHIFLNKNRYITDLHLKDTITYLSKMNIVQTYTFEYIQLVAKFRKPNFPFKN PDLLINNIFYKTGLKINIQQLLSIVENYNTAFEFLDYCYIYIFIYYKIYIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25421; Mature: 25290
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAIEQLASKLSVENTEIEDFLQELSVRFDQSVTAEEVLGLIEPFKKIFSFATLTQHIE CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QKLINNYIHKNNHLINEFKNKKLDNINLFKSRIILYNKITNYSNKDIFELHIFLNKNRYI HHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEE TDLHLKDTITYLSKMNIVQTYTFEYIQLVAKFRKPNFPFKNPDLLINNIFYKTGLKINIQ EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEHH QLLSIVENYNTAFEFLDYCYIYIFIYYKIYIT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDAIEQLASKLSVENTEIEDFLQELSVRFDQSVTAEEVLGLIEPFKKIFSFATLTQHIE CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QKLINNYIHKNNHLINEFKNKKLDNINLFKSRIILYNKITNYSNKDIFELHIFLNKNRYI HHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEE TDLHLKDTITYLSKMNIVQTYTFEYIQLVAKFRKPNFPFKNPDLLINNIFYKTGLKINIQ EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEHH QLLSIVENYNTAFEFLDYCYIYIFIYYKIYIT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA