| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is baeS [H]
Identifier: 159898828
GI number: 159898828
Start: 2946184
End: 2948184
Strand: Direct
Name: baeS [H]
Synonym: Haur_2307
Alternate gene names: 159898828
Gene position: 2946184-2948184 (Clockwise)
Preceding gene: 159898827
Following gene: 159898832
Centisome position: 46.42
GC content: 50.82
Gene sequence:
>2001_bases ATGGGCAAATCGTTACGCTGGAAATTAGGGGCAGCATTTGGCTTGGTGATTAGCGCAACCCTCTTGTTGAGCGGGCTAAG CGCATATTTGCTCACGACTCAACGCTTTGATATTTTTGTGGGCGACCAAAGCCAATTGCGCACCGAACAGCTTGCGCCAT GGCTCGAAGCCAGTCATGCCTATAACGCTGATTGGTCGGCAATATCAACCTTATTGCGGCAAAGCGAAAATTTGAGCCAA ACCCACACCCTGAGCCTAGCCCCAGCCATTTTCAGTATTGACAGCGGACAACTCTGGCAGGATAGCGCCGAGGTCATTGG CATTAGTCCTGAGCATTTGCAAGGCGAGGTTGGTAGCGGCGGCAGCATCGAGAGCGTCGCATTAGCGCATAATGTCGATC CTGAGGCGTTGATCGTGAGCCTTGAGCAAGCCCAACTGCCAATGACCACCATCCCGACGACCATGGCCGTGGTCGGAGCC ACGCCAACTGGCGCTGGCATCGACTTACAATCGCAAATTCGCTATTTTGTTGAATATCAAACCAGCCCCGATTGGCTCAG CCTAATTCAAAAACAACTGAATGCTAGCCCCGCTGAAATTCAACAAAGCTTGCAACACCCCCAAGGCTTCGTGGCACTAG CTCAGCGCTATCAAAGCGAGCCACGGCTGCTCGTTCAGGCCATTGTTGAGGCCGAACTGGCACGCCTAAAATCCATGTCG AGCATTCCAATCAGCAGCATTTTGAATGAACTCCCGCTGATCGCCCAATCAGCCTGGAGTTTTATCGATCCTCAAGGCCT AGCGCAGCCAAATAATAGCCGAATGGGGCTGCTGCATCATGACAGCATGTTGCTGCAATGGGAATTACAAGCGCTCCTGC ATGGCGATGAACGGCTGATTATTCTCGATCCAATGGGCAATGTGAGTTATGACAGCGCTCAGCAACTCAATAACGATCAG CAACTAGACAACGATTTGCGCCAGCATGCCGTGCCACTTTATGATTTAATCAGCAACCAACCAATTGGCTCAGCCCTGAT TGTGACTGGCACGCACGCGTACACCGAGCATCAAGGGGCATTTTTGCGTAGCACTGGACAGGCCTTGGTGATGAGCGGTG GTATCGTCGGAATGATCGTTTTGGCCTTAGGGTTTGTCTTGGTTCGCACCATTACCGCGCCAGTTTTGGCATTAATCCAA GCCACTAAGCAAATTATCGCCGGCAATTGGCAAACGCAAGTGCCAATCCGGTCGCACGATGAGCTAGGCCAAATGAGCAA GGCCTTCAATCATATGGCCAATTCACTGGCCCAACAGCGCATGTTACAAACCCGCCTAATTCACGATTTGACCCATGAAT TGCACACTCCACTCAGCGTAATTCAGCTTGAAATGGAAGGCTTGGCCGATCAATTACAAAGTGCCGATGAAGCTGCTCGC CATGTTGAGCATGAAATTAAATTGATTGTTAGCTTGCTCGATGATTTGACCTTGCTGCTCAAAACCGAATCACACAGCCT AGAATTTAACCAAGAAGCATTAGATGTTGAGCAATTGCTCCACGAAACCCATCAACGTTGGCAACAACCAGCGCTCAATG CAGGCATCCAATTGAAACTTAGCATCGAGCAACCACTCCCCAAGATCGCTGTTGATCGCACGCGGATTGTGCAGGCCTTG GGTAATTTGCTGAAAAATGCGATTCGCCACACGCCAGCCAATGGCACGATCAGCATCAGTTGTAGTAGCGATCAGTCATC GATCAACCTAAGCATCCACGATACTGGCGAGGGAATTGCGGCTCATGATTTGCCGCATATTTTTGAGCGTTTCTATCGGG CCGATGCCTCGCGCAACCGCGATACAGGCGGGCGGGGCTTGGGTTTAGCGATTGTCAAGCAAATTATCGAGGCTCATGGC GGCACAATTGAGGTGAGCAGCACACTTGGTCAAGGCAGCAATTTCCAAATATCGTTACCAATTAACCCAAGCCTCGACTG A
Upstream 100 bases:
>100_bases GCGCGTTTGCGCCAACGGATCGAACATGATCGCACCAATCCACAGTATATTGTGACGGTGTATGGACTTGGCTATAAATT TGTTGATTAGGTAGGGTGTT
Downstream 100 bases:
>100_bases AAAAATAGTGGCCCAAGCCAACCGTAAACATCAAATTGCCATACAACGCATGCTCCAAACACACCAAACGCAACGAGCGG GTTTGGCGATAGGTATCAGC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MGKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHAYNADWSAISTLLRQSENLSQ THTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSGGSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGA TPTGAGIDLQSQIRYFVEYQTSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLIILDPMGNVSYDSAQQLNNDQ QLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGAFLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQ ATKQIIAGNWQTQVPIRSHDELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKLSIEQPLPKIAVDRTRIVQAL GNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIAAHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHG GTIEVSSTLGQGSNFQISLPINPSLD
Sequences:
>Translated_666_residues MGKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHAYNADWSAISTLLRQSENLSQ THTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSGGSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGA TPTGAGIDLQSQIRYFVEYQTSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLIILDPMGNVSYDSAQQLNNDQ QLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGAFLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQ ATKQIIAGNWQTQVPIRSHDELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKLSIEQPLPKIAVDRTRIVQAL GNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIAAHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHG GTIEVSSTLGQGSNFQISLPINPSLD >Mature_665_residues GKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHAYNADWSAISTLLRQSENLSQT HTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSGGSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGAT PTGAGIDLQSQIRYFVEYQTSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMSS IPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLIILDPMGNVSYDSAQQLNNDQQ LDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGAFLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQA TKQIIAGNWQTQVPIRSHDELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAARH VEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKLSIEQPLPKIAVDRTRIVQALG NLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIAAHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHGG TIEVSSTLGQGSNFQISLPINPSLD
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=32.0143884892086, Blast_Score=169, Evalue=7e-43, Organism=Escherichia coli, GI1786783, Length=337, Percent_Identity=26.7062314540059, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=34.2592592592593, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1786600, Length=215, Percent_Identity=33.4883720930233, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1790346, Length=276, Percent_Identity=28.6231884057971, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1787894, Length=304, Percent_Identity=26.9736842105263, Blast_Score=103, Evalue=5e-23, Organism=Escherichia coli, GI1789808, Length=318, Percent_Identity=27.6729559748428, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1789149, Length=336, Percent_Identity=25.8928571428571, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786912, Length=241, Percent_Identity=29.4605809128631, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI145693157, Length=241, Percent_Identity=25.7261410788382, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1788549, Length=277, Percent_Identity=30.3249097472924, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790861, Length=345, Percent_Identity=26.0869565217391, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI48994928, Length=222, Percent_Identity=26.5765765765766, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI87081816, Length=341, Percent_Identity=25.8064516129032, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788279, Length=243, Percent_Identity=26.7489711934156, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1788713, Length=296, Percent_Identity=23.6486486486486, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789403, Length=221, Percent_Identity=26.6968325791855, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI87082128, Length=312, Percent_Identity=22.7564102564103, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787374, Length=349, Percent_Identity=22.6361031518625, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 72736; Mature: 72604
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHA CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHCHHHHHCCC YNADWSAISTLLRQSENLSQTHTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSG CCCCHHHHHHHHHCCCCCCHHHEEEECHHHEECCCCCCCCCCCCEECCCHHHHCCCCCCC GSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGATPTGAGIDLQSQIRYFVEYQ CCCCCEEEECCCCHHHEEEEHHHHCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHEEEC TSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS CCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLI CCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEE ILDPMGNVSYDSAQQLNNDQQLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGA EECCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHCCCC FLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQATKQIIAGNWQTQVPIRSHD HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH ELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKL HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEE SIEQPLPKIAVDRTRIVQALGNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCC AHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHGGTIEVSSTLGQGSNFQISLP HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEC INPSLD CCCCCC >Mature Secondary Structure GKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHA CCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHCHHHHHCCC YNADWSAISTLLRQSENLSQTHTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSG CCCCHHHHHHHHHCCCCCCHHHEEEECHHHEECCCCCCCCCCCCEECCCHHHHCCCCCCC GSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGATPTGAGIDLQSQIRYFVEYQ CCCCCEEEECCCCHHHEEEEHHHHCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHEEEC TSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS CCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLI CCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEE ILDPMGNVSYDSAQQLNNDQQLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGA EECCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHCCCC FLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQATKQIIAGNWQTQVPIRSHD HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH ELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKL HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEE SIEQPLPKIAVDRTRIVQALGNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCC AHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHGGTIEVSSTLGQGSNFQISLP HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEC INPSLD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]