Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is baeS [H]

Identifier: 159898828

GI number: 159898828

Start: 2946184

End: 2948184

Strand: Direct

Name: baeS [H]

Synonym: Haur_2307

Alternate gene names: 159898828

Gene position: 2946184-2948184 (Clockwise)

Preceding gene: 159898827

Following gene: 159898832

Centisome position: 46.42

GC content: 50.82

Gene sequence:

>2001_bases
ATGGGCAAATCGTTACGCTGGAAATTAGGGGCAGCATTTGGCTTGGTGATTAGCGCAACCCTCTTGTTGAGCGGGCTAAG
CGCATATTTGCTCACGACTCAACGCTTTGATATTTTTGTGGGCGACCAAAGCCAATTGCGCACCGAACAGCTTGCGCCAT
GGCTCGAAGCCAGTCATGCCTATAACGCTGATTGGTCGGCAATATCAACCTTATTGCGGCAAAGCGAAAATTTGAGCCAA
ACCCACACCCTGAGCCTAGCCCCAGCCATTTTCAGTATTGACAGCGGACAACTCTGGCAGGATAGCGCCGAGGTCATTGG
CATTAGTCCTGAGCATTTGCAAGGCGAGGTTGGTAGCGGCGGCAGCATCGAGAGCGTCGCATTAGCGCATAATGTCGATC
CTGAGGCGTTGATCGTGAGCCTTGAGCAAGCCCAACTGCCAATGACCACCATCCCGACGACCATGGCCGTGGTCGGAGCC
ACGCCAACTGGCGCTGGCATCGACTTACAATCGCAAATTCGCTATTTTGTTGAATATCAAACCAGCCCCGATTGGCTCAG
CCTAATTCAAAAACAACTGAATGCTAGCCCCGCTGAAATTCAACAAAGCTTGCAACACCCCCAAGGCTTCGTGGCACTAG
CTCAGCGCTATCAAAGCGAGCCACGGCTGCTCGTTCAGGCCATTGTTGAGGCCGAACTGGCACGCCTAAAATCCATGTCG
AGCATTCCAATCAGCAGCATTTTGAATGAACTCCCGCTGATCGCCCAATCAGCCTGGAGTTTTATCGATCCTCAAGGCCT
AGCGCAGCCAAATAATAGCCGAATGGGGCTGCTGCATCATGACAGCATGTTGCTGCAATGGGAATTACAAGCGCTCCTGC
ATGGCGATGAACGGCTGATTATTCTCGATCCAATGGGCAATGTGAGTTATGACAGCGCTCAGCAACTCAATAACGATCAG
CAACTAGACAACGATTTGCGCCAGCATGCCGTGCCACTTTATGATTTAATCAGCAACCAACCAATTGGCTCAGCCCTGAT
TGTGACTGGCACGCACGCGTACACCGAGCATCAAGGGGCATTTTTGCGTAGCACTGGACAGGCCTTGGTGATGAGCGGTG
GTATCGTCGGAATGATCGTTTTGGCCTTAGGGTTTGTCTTGGTTCGCACCATTACCGCGCCAGTTTTGGCATTAATCCAA
GCCACTAAGCAAATTATCGCCGGCAATTGGCAAACGCAAGTGCCAATCCGGTCGCACGATGAGCTAGGCCAAATGAGCAA
GGCCTTCAATCATATGGCCAATTCACTGGCCCAACAGCGCATGTTACAAACCCGCCTAATTCACGATTTGACCCATGAAT
TGCACACTCCACTCAGCGTAATTCAGCTTGAAATGGAAGGCTTGGCCGATCAATTACAAAGTGCCGATGAAGCTGCTCGC
CATGTTGAGCATGAAATTAAATTGATTGTTAGCTTGCTCGATGATTTGACCTTGCTGCTCAAAACCGAATCACACAGCCT
AGAATTTAACCAAGAAGCATTAGATGTTGAGCAATTGCTCCACGAAACCCATCAACGTTGGCAACAACCAGCGCTCAATG
CAGGCATCCAATTGAAACTTAGCATCGAGCAACCACTCCCCAAGATCGCTGTTGATCGCACGCGGATTGTGCAGGCCTTG
GGTAATTTGCTGAAAAATGCGATTCGCCACACGCCAGCCAATGGCACGATCAGCATCAGTTGTAGTAGCGATCAGTCATC
GATCAACCTAAGCATCCACGATACTGGCGAGGGAATTGCGGCTCATGATTTGCCGCATATTTTTGAGCGTTTCTATCGGG
CCGATGCCTCGCGCAACCGCGATACAGGCGGGCGGGGCTTGGGTTTAGCGATTGTCAAGCAAATTATCGAGGCTCATGGC
GGCACAATTGAGGTGAGCAGCACACTTGGTCAAGGCAGCAATTTCCAAATATCGTTACCAATTAACCCAAGCCTCGACTG
A

Upstream 100 bases:

>100_bases
GCGCGTTTGCGCCAACGGATCGAACATGATCGCACCAATCCACAGTATATTGTGACGGTGTATGGACTTGGCTATAAATT
TGTTGATTAGGTAGGGTGTT

Downstream 100 bases:

>100_bases
AAAAATAGTGGCCCAAGCCAACCGTAAACATCAAATTGCCATACAACGCATGCTCCAAACACACCAAACGCAACGAGCGG
GTTTGGCGATAGGTATCAGC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MGKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHAYNADWSAISTLLRQSENLSQ
THTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSGGSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGA
TPTGAGIDLQSQIRYFVEYQTSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS
SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLIILDPMGNVSYDSAQQLNNDQ
QLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGAFLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQ
ATKQIIAGNWQTQVPIRSHDELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR
HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKLSIEQPLPKIAVDRTRIVQAL
GNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIAAHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHG
GTIEVSSTLGQGSNFQISLPINPSLD

Sequences:

>Translated_666_residues
MGKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHAYNADWSAISTLLRQSENLSQ
THTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSGGSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGA
TPTGAGIDLQSQIRYFVEYQTSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS
SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLIILDPMGNVSYDSAQQLNNDQ
QLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGAFLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQ
ATKQIIAGNWQTQVPIRSHDELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR
HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKLSIEQPLPKIAVDRTRIVQAL
GNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIAAHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHG
GTIEVSSTLGQGSNFQISLPINPSLD
>Mature_665_residues
GKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHAYNADWSAISTLLRQSENLSQT
HTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSGGSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGAT
PTGAGIDLQSQIRYFVEYQTSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMSS
IPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLIILDPMGNVSYDSAQQLNNDQQ
LDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGAFLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQA
TKQIIAGNWQTQVPIRSHDELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAARH
VEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKLSIEQPLPKIAVDRTRIVQALG
NLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIAAHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHGG
TIEVSSTLGQGSNFQISLPINPSLD

Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=32.0143884892086, Blast_Score=169, Evalue=7e-43,
Organism=Escherichia coli, GI1786783, Length=337, Percent_Identity=26.7062314540059, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=34.2592592592593, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1786600, Length=215, Percent_Identity=33.4883720930233, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI1790346, Length=276, Percent_Identity=28.6231884057971, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1787894, Length=304, Percent_Identity=26.9736842105263, Blast_Score=103, Evalue=5e-23,
Organism=Escherichia coli, GI1789808, Length=318, Percent_Identity=27.6729559748428, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI1789149, Length=336, Percent_Identity=25.8928571428571, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786912, Length=241, Percent_Identity=29.4605809128631, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI145693157, Length=241, Percent_Identity=25.7261410788382, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788549, Length=277, Percent_Identity=30.3249097472924, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790861, Length=345, Percent_Identity=26.0869565217391, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI48994928, Length=222, Percent_Identity=26.5765765765766, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI87081816, Length=341, Percent_Identity=25.8064516129032, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788279, Length=243, Percent_Identity=26.7489711934156, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1788713, Length=296, Percent_Identity=23.6486486486486, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789403, Length=221, Percent_Identity=26.6968325791855, Blast_Score=66, Evalue=9e-12,
Organism=Escherichia coli, GI87082128, Length=312, Percent_Identity=22.7564102564103, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787374, Length=349, Percent_Identity=22.6361031518625, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 72736; Mature: 72604

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHA
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHCHHHHHCCC
YNADWSAISTLLRQSENLSQTHTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSG
CCCCHHHHHHHHHCCCCCCHHHEEEECHHHEECCCCCCCCCCCCEECCCHHHHCCCCCCC
GSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGATPTGAGIDLQSQIRYFVEYQ
CCCCCEEEECCCCHHHEEEEHHHHCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHEEEC
TSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS
CCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLI
CCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEE
ILDPMGNVSYDSAQQLNNDQQLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGA
EECCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHCCCC
FLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQATKQIIAGNWQTQVPIRSHD
HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH
ELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKL
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEE
SIEQPLPKIAVDRTRIVQALGNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
AHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHGGTIEVSSTLGQGSNFQISLP
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEC
INPSLD
CCCCCC
>Mature Secondary Structure 
GKSLRWKLGAAFGLVISATLLLSGLSAYLLTTQRFDIFVGDQSQLRTEQLAPWLEASHA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHCHHHHHCCC
YNADWSAISTLLRQSENLSQTHTLSLAPAIFSIDSGQLWQDSAEVIGISPEHLQGEVGSG
CCCCHHHHHHHHHCCCCCCHHHEEEECHHHEECCCCCCCCCCCCEECCCHHHHCCCCCCC
GSIESVALAHNVDPEALIVSLEQAQLPMTTIPTTMAVVGATPTGAGIDLQSQIRYFVEYQ
CCCCCEEEECCCCHHHEEEEHHHHCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHEEEC
TSPDWLSLIQKQLNASPAEIQQSLQHPQGFVALAQRYQSEPRLLVQAIVEAELARLKSMS
CCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
SIPISSILNELPLIAQSAWSFIDPQGLAQPNNSRMGLLHHDSMLLQWELQALLHGDERLI
CCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEE
ILDPMGNVSYDSAQQLNNDQQLDNDLRQHAVPLYDLISNQPIGSALIVTGTHAYTEHQGA
EECCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHCCCC
FLRSTGQALVMSGGIVGMIVLALGFVLVRTITAPVLALIQATKQIIAGNWQTQVPIRSHD
HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH
ELGQMSKAFNHMANSLAQQRMLQTRLIHDLTHELHTPLSVIQLEMEGLADQLQSADEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HVEHEIKLIVSLLDDLTLLLKTESHSLEFNQEALDVEQLLHETHQRWQQPALNAGIQLKL
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEE
SIEQPLPKIAVDRTRIVQALGNLLKNAIRHTPANGTISISCSSDQSSINLSIHDTGEGIA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
AHDLPHIFERFYRADASRNRDTGGRGLGLAIVKQIIEAHGGTIEVSSTLGQGSNFQISLP
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEC
INPSLD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8282725; 9097040; 9278503 [H]