| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yqeL [H]
Identifier: 159898820
GI number: 159898820
Start: 2939849
End: 2940124
Strand: Direct
Name: yqeL [H]
Synonym: Haur_2299
Alternate gene names: 159898820
Gene position: 2939849-2940124 (Clockwise)
Preceding gene: 159898819
Following gene: 159898822
Centisome position: 46.32
GC content: 48.19
Gene sequence:
>276_bases ATGCTCGACGTTCGCCCATTAGCCACCTTCGCCGATTTTCTGGTGATTTGTACGGCTGGCAATGAGCGGATGGTGCGGGC AGTCGTAAAAGAAATTGATGATCAATTAGTCCAAGAAGGCGCAGCCACCCCCAAAATCGAAGGTTCACCCGAAACTGGCT GGGTTTTGCTCGATTTTGGCGATGTGGTTGTGCACATATTTAGCCCTGAACAACGCGATTTTTACAAGCTCGATAAATTG TGGCAAAAAGCTACGCCAGTTGTCGTTCTTCAGTAA
Upstream 100 bases:
>100_bases AATACAGTTCTAGAAATGTGGAGGTCCACCTATCGAAGCGCAAGTTCTTGCCCGCCGTGCTGTTGATTTAGCAGACTCGA AGCAGGCAAATGATATTATA
Downstream 100 bases:
>100_bases TCGGCGGGTCAAGGACGATCACGTGCGAGGTACACCATGAACAAATCTACACAACGCGAACGCTATGTCGTCTTTGCGCT TGGAGCAGCAGCCGGAAGTG
Product: iojap-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MLDVRPLATFADFLVICTAGNERMVRAVVKEIDDQLVQEGAATPKIEGSPETGWVLLDFGDVVVHIFSPEQRDFYKLDKL WQKATPVVVLQ
Sequences:
>Translated_91_residues MLDVRPLATFADFLVICTAGNERMVRAVVKEIDDQLVQEGAATPKIEGSPETGWVLLDFGDVVVHIFSPEQRDFYKLDKL WQKATPVVVLQ >Mature_91_residues MLDVRPLATFADFLVICTAGNERMVRAVVKEIDDQLVQEGAATPKIEGSPETGWVLLDFGDVVVHIFSPEQRDFYKLDKL WQKATPVVVLQ
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Iojap family [H]
Homologues:
Organism=Escherichia coli, GI87081768, Length=84, Percent_Identity=35.7142857142857, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004394 [H]
Pfam domain/function: PF02410 DUF143 [H]
EC number: NA
Molecular weight: Translated: 10216; Mature: 10216
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVRPLATFADFLVICTAGNERMVRAVVKEIDDQLVQEGAATPKIEGSPETGWVLLDFG CCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC DVVVHIFSPEQRDFYKLDKLWQKATPVVVLQ CEEEEEECCCCCHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure MLDVRPLATFADFLVICTAGNERMVRAVVKEIDDQLVQEGAATPKIEGSPETGWVLLDFG CCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC DVVVHIFSPEQRDFYKLDKLWQKATPVVVLQ CEEEEEECCCCCHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]