| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fbpB [H]
Identifier: 159898787
GI number: 159898787
Start: 2898666
End: 2900393
Strand: Direct
Name: fbpB [H]
Synonym: Haur_2266
Alternate gene names: 159898787
Gene position: 2898666-2900393 (Clockwise)
Preceding gene: 159898786
Following gene: 159898788
Centisome position: 45.67
GC content: 49.31
Gene sequence:
>1728_bases ATGGCAGCAACAGCCCAGACTCGCCCAATTAAGGCGATTGCAAAAGCACCCAAATGGCGGCTCGATCGGGTTATTCAATG GTTGATCGCACTGGCAGTCGTTGGTTTAGTCTTATTTCCAACTTGGCCAATTCTCTATCAAAGCCTCTTAGAAAAACCCT TGTACGAAGCCAGCAATACCCTGAGTTTGCAAAATTTCCCACGGGTTTTGGGTAATCCCAAAATTTGGCAGGTGATCGGC AATACAGCGGTTTTTATGCTTGGCAGCACGATTGTGGGAACCCTGATTGGAATTGGCTTTGCAGTGCTCTTGATTCGCAC TGATCTGCCTGGGGCGCAATGGCTGCAAAAATTGATCACGATTCCCTACTATGTTTCAGCACTGATTTTGGCCTTTGGCT GGGCGGTGATGTATGGCCCCCAAGGTTTTATGACGGTGATGGTGCGCGAATGGGGCTTGCCAACCTGGAATCTCTATACG ATGCCAGGCTTGATTATGGTCAGTGCGCTCTATTTTATGCCGTTGACTTTTATGTATTGTAGCTCCTCGCTGAGCATGGC CGACCCGCAACTGGAATCAGCCGCACGGATTGCTGGCGCAAAACCGTTGCGCATTTTGCTGCGCATTACCATCCCCCTGA TTCGGCCTGCAATGCTATATGCGCTGGTATTGACCATGGTTTCCAGTATCGAATTACTATCAATTCCCTTGGTGCTCGGC GAAAGCGCCCAAATTGATGTGCTTTCAACCTTTCTCTATCGCACAGCGCTGGTGAGCGGGACGACCGATTATGGCACCTT GGCAGTTGTGGCAATTATGGTGGTGCTGTTTATTTCAGTCTTGGTTATGCTGCAAAACCACCTGATGAAGCAAGAACGAC GCTTTGTATCGGTCAGCGGCAAAATCTCACGAGCGCGGGTTTTGCATTTAGGCTGGTTGCGCTGGCCTTTGGGATTCGTC GTCTATCTGTTTGCGGGCTTGACGATTTTGGTGCCGCTTGGCGGGATTATTCTGCAAGCCTTCACGCCATTTCTCAGCGC CCTGATTAATCCATTTTCAATTTTGACTATGGATAATTTCAAACAAGCCTTTGAGTTTGAAACCTATCGGGTTGCGATTA TCAATAGTTTGTTGATTGCAGGCGTTGGCGGAGTCGTCGCAACCCTATTTATGGCAGCCGTTGCCTTATTGACCTATCGC TCGAAATTCCCGATGCGCGGCGCAGTCAAATATATCGCCCAATATCCACGGGCTTTTCCGGGCACCATTATCGGCTTAGG GTTTTTATGGGCGTTGCTCTCGTTTCCGGCCTTGGGCGGTCTACGCAATACAATTTGGATTTTGATCATTGCCTACACCA TGCGCTATTTACCATTAGGATTTAGTGCGATGAGTCCCTCGATTTTGCAAATCTCCGATGAGCTTGATCGGGCGGCGCGA GTGAGCGGCACAACGTGGCTAGGAGTGATGCGCCATATTATGCTGCCATTGTTACGGCCAGCGTTGCTTACAACCTTTAC CCTCTTATTTATCACCTTTTTAAAAGAATACTCAGTAGCGCTGTTTTTGTTCACCCGTGGCTCGCAAGTGATTGGCACAA CCATGCTCGAAGTTTGGGCGCAAGGTGGGCCTGGCCCAGCCGCCGCCTTGGCCGTAATTCAATTATTAATTATTGGGGTT GTGCGCTGGCTAAGTAGCTTTATTCCGACGGTCAAAGTTCGCGAATAA
Upstream 100 bases:
>100_bases CCAATAAGCCCCACTTAACTTAAATGGTGCTGGGTAGAGCGCTGTAGGCCAGTGAGCCGGCTTACAACGCTCTACCCAGC ACCATCCAAGGAGTTTGCAG
Downstream 100 bases:
>100_bases TTGGTAAGGAGCAACCGATGAGCAACATTCATCACGATTCAGCCGGATTAACCATCGAACATCTCAGTAAAATGTATAAT CGCAGTGCCAAAGCGCTTGA
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MAATAQTRPIKAIAKAPKWRLDRVIQWLIALAVVGLVLFPTWPILYQSLLEKPLYEASNTLSLQNFPRVLGNPKIWQVIG NTAVFMLGSTIVGTLIGIGFAVLLIRTDLPGAQWLQKLITIPYYVSALILAFGWAVMYGPQGFMTVMVREWGLPTWNLYT MPGLIMVSALYFMPLTFMYCSSSLSMADPQLESAARIAGAKPLRILLRITIPLIRPAMLYALVLTMVSSIELLSIPLVLG ESAQIDVLSTFLYRTALVSGTTDYGTLAVVAIMVVLFISVLVMLQNHLMKQERRFVSVSGKISRARVLHLGWLRWPLGFV VYLFAGLTILVPLGGIILQAFTPFLSALINPFSILTMDNFKQAFEFETYRVAIINSLLIAGVGGVVATLFMAAVALLTYR SKFPMRGAVKYIAQYPRAFPGTIIGLGFLWALLSFPALGGLRNTIWILIIAYTMRYLPLGFSAMSPSILQISDELDRAAR VSGTTWLGVMRHIMLPLLRPALLTTFTLLFITFLKEYSVALFLFTRGSQVIGTTMLEVWAQGGPGPAAALAVIQLLIIGV VRWLSSFIPTVKVRE
Sequences:
>Translated_575_residues MAATAQTRPIKAIAKAPKWRLDRVIQWLIALAVVGLVLFPTWPILYQSLLEKPLYEASNTLSLQNFPRVLGNPKIWQVIG NTAVFMLGSTIVGTLIGIGFAVLLIRTDLPGAQWLQKLITIPYYVSALILAFGWAVMYGPQGFMTVMVREWGLPTWNLYT MPGLIMVSALYFMPLTFMYCSSSLSMADPQLESAARIAGAKPLRILLRITIPLIRPAMLYALVLTMVSSIELLSIPLVLG ESAQIDVLSTFLYRTALVSGTTDYGTLAVVAIMVVLFISVLVMLQNHLMKQERRFVSVSGKISRARVLHLGWLRWPLGFV VYLFAGLTILVPLGGIILQAFTPFLSALINPFSILTMDNFKQAFEFETYRVAIINSLLIAGVGGVVATLFMAAVALLTYR SKFPMRGAVKYIAQYPRAFPGTIIGLGFLWALLSFPALGGLRNTIWILIIAYTMRYLPLGFSAMSPSILQISDELDRAAR VSGTTWLGVMRHIMLPLLRPALLTTFTLLFITFLKEYSVALFLFTRGSQVIGTTMLEVWAQGGPGPAAALAVIQLLIIGV VRWLSSFIPTVKVRE >Mature_574_residues AATAQTRPIKAIAKAPKWRLDRVIQWLIALAVVGLVLFPTWPILYQSLLEKPLYEASNTLSLQNFPRVLGNPKIWQVIGN TAVFMLGSTIVGTLIGIGFAVLLIRTDLPGAQWLQKLITIPYYVSALILAFGWAVMYGPQGFMTVMVREWGLPTWNLYTM PGLIMVSALYFMPLTFMYCSSSLSMADPQLESAARIAGAKPLRILLRITIPLIRPAMLYALVLTMVSSIELLSIPLVLGE SAQIDVLSTFLYRTALVSGTTDYGTLAVVAIMVVLFISVLVMLQNHLMKQERRFVSVSGKISRARVLHLGWLRWPLGFVV YLFAGLTILVPLGGIILQAFTPFLSALINPFSILTMDNFKQAFEFETYRVAIINSLLIAGVGGVVATLFMAAVALLTYRS KFPMRGAVKYIAQYPRAFPGTIIGLGFLWALLSFPALGGLRNTIWILIIAYTMRYLPLGFSAMSPSILQISDELDRAARV SGTTWLGVMRHIMLPLLRPALLTTFTLLFITFLKEYSVALFLFTRGSQVIGTTMLEVWAQGGPGPAAALAVIQLLIIGVV RWLSSFIPTVKVRE
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=235, Percent_Identity=28.0851063829787, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 63493; Mature: 63362
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATAQTRPIKAIAKAPKWRLDRVIQWLIALAVVGLVLFPTWPILYQSLLEKPLYEASNT CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC LSLQNFPRVLGNPKIWQVIGNTAVFMLGSTIVGTLIGIGFAVLLIRTDLPGAQWLQKLIT CCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IPYYVSALILAFGWAVMYGPQGFMTVMVREWGLPTWNLYTMPGLIMVSALYFMPLTFMYC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SSSLSMADPQLESAARIAGAKPLRILLRITIPLIRPAMLYALVLTMVSSIELLSIPLVLG CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ESAQIDVLSTFLYRTALVSGTTDYGTLAVVAIMVVLFISVLVMLQNHLMKQERRFVSVSG CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KISRARVLHLGWLRWPLGFVVYLFAGLTILVPLGGIILQAFTPFLSALINPFSILTMDNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHH KQAFEFETYRVAIINSLLIAGVGGVVATLFMAAVALLTYRSKFPMRGAVKYIAQYPRAFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC GTIIGLGFLWALLSFPALGGLRNTIWILIIAYTMRYLPLGFSAMSPSILQISDELDRAAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH VSGTTWLGVMRHIMLPLLRPALLTTFTLLFITFLKEYSVALFLFTRGSQVIGTTMLEVWA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHH QGGPGPAAALAVIQLLIIGVVRWLSSFIPTVKVRE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AATAQTRPIKAIAKAPKWRLDRVIQWLIALAVVGLVLFPTWPILYQSLLEKPLYEASNT CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC LSLQNFPRVLGNPKIWQVIGNTAVFMLGSTIVGTLIGIGFAVLLIRTDLPGAQWLQKLIT CCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IPYYVSALILAFGWAVMYGPQGFMTVMVREWGLPTWNLYTMPGLIMVSALYFMPLTFMYC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SSSLSMADPQLESAARIAGAKPLRILLRITIPLIRPAMLYALVLTMVSSIELLSIPLVLG CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ESAQIDVLSTFLYRTALVSGTTDYGTLAVVAIMVVLFISVLVMLQNHLMKQERRFVSVSG CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KISRARVLHLGWLRWPLGFVVYLFAGLTILVPLGGIILQAFTPFLSALINPFSILTMDNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHH KQAFEFETYRVAIINSLLIAGVGGVVATLFMAAVALLTYRSKFPMRGAVKYIAQYPRAFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC GTIIGLGFLWALLSFPALGGLRNTIWILIIAYTMRYLPLGFSAMSPSILQISDELDRAAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH VSGTTWLGVMRHIMLPLLRPALLTTFTLLFITFLKEYSVALFLFTRGSQVIGTTMLEVWA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHH QGGPGPAAALAVIQLLIIGVVRWLSSFIPTVKVRE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]