Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898786

Identifier: 159898786

GI number: 159898786

Start: 2897430

End: 2898572

Strand: Direct

Name: 159898786

Synonym: Haur_2265

Alternate gene names: NA

Gene position: 2897430-2898572 (Clockwise)

Preceding gene: 159898783

Following gene: 159898787

Centisome position: 45.65

GC content: 49.96

Gene sequence:

>1143_bases
ATGAAAAGCCATTTCACGCGCATTGTGGCGCACGTGTTCACTGTCGGACTCATGGCCTCGTTGATCAGTTGTGGGAGCAC
GCAAGTAACGCCTACCGTCAGCCAAAGTGCCCAATCAGTTTCAGCCTCAAACGCCGATCCCGCTTTAGTTGAAGCCTCAA
AAAAAGAAGCCGATGGTATTTTGATTTATTCGATTATGAGTGAGAAAAATTGGCAGCCAGTGATTCAAGGCTTTAACGCC
AAATATCCTTGGATCAAAGTAACAACTGCTGATTTAGGAGCTTACGAGGTATTCGAACGCTACTACACCGAAGCCGCTGG
CAATGCCCGTACTGCCGATTTTATCTCCACCACCGCGCCTGATGGCTGGATCAACTTTATCGATAAAGGCGAAGTCCAGT
CGTATGTTTCCAGCGAAGATGCCCAAATTCCTGAGCTTGGCAAAATTGCTCAAGGGGTCTATGCCGCCTCAACCGATCCG
ATGGTCTTTATTTGGAACAAGCAATTGGTCGCTGATCCGCCGCAAACTATGGCCGAACTGATCAGCATGATCGAAAAAGA
CCCCAGCGCCATGCAAGACAAATTGGTGAGCTACGATGCCGATGGCGAAGGCTTTGGCTATGGTCTCAACTGGTTTTATA
CCAAGGCCAAAGGTGCTGATGGTTGGAAAACTTTAGAAGCAATTGGTTCAAGCCAGCCCAAAATTTTAACCTCTGGCGGC
AAGATGATCGATTCAGTGCTTTCGGGCGAATCCAGCATCGGCTACTTTGTCTCGAATATCACAGTTCAGCCACGCTTGGA
AGCTGCTCAACAATTGCTTGGCTATAGCTTTGTGCCTGATGCTCAAGTTGTCGCGGTGCGGGGCATGGCAGTCACCAAAC
ATGCTGCTAGCCCTAATTCAGCCAAATTGCTACTCGATTATATTCTCTCAGCCGAAGGACAAATGGCCTTCTCGCAAGGT
GGCTTAACCGCCTATCGCCCCGACATTGCCGCCTCTGCGCCACTGCATCTTTCGCAAGTAAGCCAAGCGGTTGGGGGCGA
GCAAAATATCATCTTCTCACGGCCCGATAAAGCCCTGGCTGACCCTCAACAACGCAGCCAGTTCCTCAACCAATGGAAAC
AAGCCCTCGGTCGCAACCAATAA

Upstream 100 bases:

>100_bases
TTAATTTTTACGTCGTTTTTACATTGATCAACTAAGCTACTACTCAATCCAGCGACGCACTGAACAACCCTCCTCTCAAA
CAAGCGACGGAGTAAACCCA

Downstream 100 bases:

>100_bases
GCCCCACTTAACTTAAATGGTGCTGGGTAGAGCGCTGTAGGCCAGTGAGCCGGCTTACAACGCTCTACCCAGCACCATCC
AAGGAGTTTGCAGATGGCAG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC-Type Fe3+ Transporter Periplasmic Protein; Iron ABC Transporter; HAMP Domain-Containing; Two-Component Sensor Histidine Kinase

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKSHFTRIVAHVFTVGLMASLISCGSTQVTPTVSQSAQSVSASNADPALVEASKKEADGILIYSIMSEKNWQPVIQGFNA
KYPWIKVTTADLGAYEVFERYYTEAAGNARTADFISTTAPDGWINFIDKGEVQSYVSSEDAQIPELGKIAQGVYAASTDP
MVFIWNKQLVADPPQTMAELISMIEKDPSAMQDKLVSYDADGEGFGYGLNWFYTKAKGADGWKTLEAIGSSQPKILTSGG
KMIDSVLSGESSIGYFVSNITVQPRLEAAQQLLGYSFVPDAQVVAVRGMAVTKHAASPNSAKLLLDYILSAEGQMAFSQG
GLTAYRPDIAASAPLHLSQVSQAVGGEQNIIFSRPDKALADPQQRSQFLNQWKQALGRNQ

Sequences:

>Translated_380_residues
MKSHFTRIVAHVFTVGLMASLISCGSTQVTPTVSQSAQSVSASNADPALVEASKKEADGILIYSIMSEKNWQPVIQGFNA
KYPWIKVTTADLGAYEVFERYYTEAAGNARTADFISTTAPDGWINFIDKGEVQSYVSSEDAQIPELGKIAQGVYAASTDP
MVFIWNKQLVADPPQTMAELISMIEKDPSAMQDKLVSYDADGEGFGYGLNWFYTKAKGADGWKTLEAIGSSQPKILTSGG
KMIDSVLSGESSIGYFVSNITVQPRLEAAQQLLGYSFVPDAQVVAVRGMAVTKHAASPNSAKLLLDYILSAEGQMAFSQG
GLTAYRPDIAASAPLHLSQVSQAVGGEQNIIFSRPDKALADPQQRSQFLNQWKQALGRNQ
>Mature_380_residues
MKSHFTRIVAHVFTVGLMASLISCGSTQVTPTVSQSAQSVSASNADPALVEASKKEADGILIYSIMSEKNWQPVIQGFNA
KYPWIKVTTADLGAYEVFERYYTEAAGNARTADFISTTAPDGWINFIDKGEVQSYVSSEDAQIPELGKIAQGVYAASTDP
MVFIWNKQLVADPPQTMAELISMIEKDPSAMQDKLVSYDADGEGFGYGLNWFYTKAKGADGWKTLEAIGSSQPKILTSGG
KMIDSVLSGESSIGYFVSNITVQPRLEAAQQLLGYSFVPDAQVVAVRGMAVTKHAASPNSAKLLLDYILSAEGQMAFSQG
GLTAYRPDIAASAPLHLSQVSQAVGGEQNIIFSRPDKALADPQQRSQFLNQWKQALGRNQ

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40992; Mature: 40992

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSHFTRIVAHVFTVGLMASLISCGSTQVTPTVSQSAQSVSASNADPALVEASKKEADGI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCE
LIYSIMSEKNWQPVIQGFNAKYPWIKVTTADLGAYEVFERYYTEAAGNARTADFISTTAP
EEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHCCCC
DGWINFIDKGEVQSYVSSEDAQIPELGKIAQGVYAASTDPMVFIWNKQLVADPPQTMAEL
CHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCEECCCCCEEEEECCCCCCCCHHHHHHH
ISMIEKDPSAMQDKLVSYDADGEGFGYGLNWFYTKAKGADGWKTLEAIGSSQPKILTSGG
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCH
KMIDSVLSGESSIGYFVSNITVQPRLEAAQQLLGYSFVPDAQVVAVRGMAVTKHAASPNS
HHHHHHHCCCCCCCEEEECCEECCHHHHHHHHHCCCCCCCCEEEEEECEEEECCCCCCCH
AKLLLDYILSAEGQMAFSQGGLTAYRPDIAASAPLHLSQVSQAVGGEQNIIFSRPDKALA
HHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHC
DPQQRSQFLNQWKQALGRNQ
CHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSHFTRIVAHVFTVGLMASLISCGSTQVTPTVSQSAQSVSASNADPALVEASKKEADGI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCE
LIYSIMSEKNWQPVIQGFNAKYPWIKVTTADLGAYEVFERYYTEAAGNARTADFISTTAP
EEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHCCCC
DGWINFIDKGEVQSYVSSEDAQIPELGKIAQGVYAASTDPMVFIWNKQLVADPPQTMAEL
CHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCEECCCCCEEEEECCCCCCCCHHHHHHH
ISMIEKDPSAMQDKLVSYDADGEGFGYGLNWFYTKAKGADGWKTLEAIGSSQPKILTSGG
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCH
KMIDSVLSGESSIGYFVSNITVQPRLEAAQQLLGYSFVPDAQVVAVRGMAVTKHAASPNS
HHHHHHHCCCCCCCEEEECCEECCHHHHHHHHHCCCCCCCCEEEEEECEEEECCCCCCCH
AKLLLDYILSAEGQMAFSQGGLTAYRPDIAASAPLHLSQVSQAVGGEQNIIFSRPDKALA
HHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHC
DPQQRSQFLNQWKQALGRNQ
CHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA