| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898772
Identifier: 159898772
GI number: 159898772
Start: 2869224
End: 2871887
Strand: Reverse
Name: 159898772
Synonym: Haur_2251
Alternate gene names: NA
Gene position: 2871887-2869224 (Counterclockwise)
Preceding gene: 159898773
Following gene: 159898771
Centisome position: 45.25
GC content: 53.6
Gene sequence:
>2664_bases ATGCGCTTGAAGCCTGTTCAGCTTCTTATTATGACGTTCCTGCTTTTGACCATGGCTCAGACTGGTGCGAGATTTCGTGC CTACGCGCGGTTTGACGCTCCAGTTCAATCAATCCTTGCTGGTGAATCGCGTGGTAGCACCCAAATTGGGGCAGCTGGCA TCCAACGCACCAGCGCTGCAATTATGGCCAGCCAAGCCTTAGCCGATCAACAACCGCAGCCAGTACGTATAGCAAAACCA CGCTTTCAGCTTGATCGCCAGCGTTTAGCTGAAAATCCCAATGCTCCAGCGGTTACCCAATGGCCGACTCAAGCAGATAC TTCCCCAGTTGGAGCATCGAATGCCACGGCCTTGAGCAGTTTGAGCACTACTTTTACCGGTGCAACCTTGGCTGATACTA ATCGAATTCCGCCGGGCACCATGGGCACGGTTGGGCCAGGCCAATTTGTGGTGGCAATTAATGGCCGCTTGCGAACCTTC AATAAAGCGACGGGTGTTGCTGATGGCGTGATCGATAGTACGCTGGAAACGTTTTTTAGTTCGGTGATGACCCCACCGAT TGCCAATAACATCACCAACGATCCACGGATTCGCTATGATCGAATGACCCAGCGCTGGTTTCTGACGGTCACCGATCTGC CAGGCCTTTCGGGCAATCAAGTCAATCGGCTGTTGCTGGCGGTTAGCGATGCTGCCAGTGCGGGAGTTATTACGCCTAGC ACGGTCTGGACATTCTACTTTTTTCAAGGCAGCAACACCGATGTGATGGATTATGCGAGCTTAGGCGTTGATGTTAATGC CTTGTATATTGGCGCTAACATGTTCACCACCGCTGGTGCCTTTGTTGGCACCAATGGTTATGTGGTGCAAAAAAGCTCGA TCCTTGGGGCTGGGCCAATGGTGGTAACCACCTTTGCTGGGTTAGTGGCAGGTGGGACTGGCGCTGGCCCATTTGCCCCA CAAGGGGTTGATAATTTTGACCCAACTGCAACCGCAGGCTACTTTGTGGGGGTTGATAATGCCACATTTAGCACAATCAT GTTTCGGAGGGTGAGCAATCCAGGCAGTATGACCCCCACGATTTCGGCCAATATCGCGGTGACCGTACCCACCACGACCT TTCCTACCCGCGTTCCCCACCTAGGCAATACTGGGGGGGCGAACGGTCAACTCGATGGCATTGATGATCGCTTGTATTCA GCCATGATTCGTAATGGTCGGCTGTGGACGGCGCACAGCTTCAGAACCAATGCCGCTGGGGTTGCAAGCACCGCAACCGG GGCACGTAACTCTGTGCGTTGGTACGAGTTTCAGAATCTTGATACGACACCAACCTTGCGCCAAGCGGGAACGGTGTTTG ATAATGCTGCTGCCAACCCGCTCTTTCAATGGATTCCAAGCGTTGCTGTTTCAGGCCAAGGCCACGCTGTGATGGGCTTC AGTAGTGCCGGAGCCACAGCCCGCGCCAATGCATCCATGACCAGCCGCTTGGCTGGCGATACTCTTGGAACAATGCAAGC GCCGACGCTCTATACGGCGAGCAGCTTTGATTACAATCCCGCCGCTGATCCTGGTGGGGCGGCTGGGCGACTTTGGGGCA CTACCTCCTATACGAGCCTCGACCCCAGCGATGATATGACCATGTGGACGATTCAGCAGTTTACCAATGCCACCGATTCG TATGGGGTGCAGGTTGTCAAAGTACTAGCTCCGCCGCCAGCAACCCCTACTACCAGTAATCCAGCCTCGGTCGATCAGGG AACGACGACGGATATCATCATTACTGGTACTTCGAGCGCTGGCTCGGGCTTTTATGATCCTGGGGCAGGGTTTAGCAACC GAATTACTGCCAGCATCAATGGTGGCGGGGTAACAGTAAATAGTGTTACCTACAACAGCCCAACCCAAATTACCCTCAAC ATCACGGTTGCACCTGGAGCTAGTGCTGGTGCACGCATTGTGACGGTAACTAACCCAGATGGTCAGAGCCTTGACAGCAC CAGCGGGATTGTAACGATCGTTGCAGCCGCGACGGCCACTCCAACCAACACACCGACGAATACACCAACCAACACGCCAA CTAATACCGCGACGAATACACCAACCAACACGCCGACCAATACACCAACCAATACCGCGACAGCAACGGTTAGCAACACA CCAACCAATACGCCAACCAATACCGCGACAGCAACGGTTAGTAACACACCAACGAATACGCCGACTGGTACACCAACCAA CACGCCTGTGCCCACAACATTTATTCGATATTTGCCCTTTGTAACCATGAGCCGACTTGGCTCAATTGCGACCCTCGGAT CAGCTGCGATACCGACTAACCCAATCGCAACCCCAGGCCTCGTCTTTTTTACCGGTACAATCAGTCTACCGACAGTGCTA CCAAGTGGTGGAACGTATTGGCTTTCATCAAGCCCGAGCAGCCTTGTAGCAGGTTTAGTTGATGATGCGGTGCTTATACG GGCGGGGCCAACCGAGCTATTTCGTTACGAATATGGAAGCAATGGACAGCCGCAGGCCGCGTTGGTCGAAGTGCCAGCAA ACATCTTGATTCCAAGGGCTGGACAGACGCTAACGGTGGAGTTTGTGGATCTCTATGGGAGTGTTTATAGCGCGACCCCC TTATACCTCGTTTGGACACCCTAA
Upstream 100 bases:
>100_bases TGCTGTTTAACATCTACCAAAACAAACGATCAATCTGATTGAGTTTGATAGCTTCAAAACCATTATGGTGGTGAATCCAC ACAGTCTAAGGAGATTCTGC
Downstream 100 bases:
>100_bases GCCTATGTTTTGTGCGAGCTACCCCGCTCCTGCTGCGATTGGGAGCGGGGTCGTGGCTACTACCTAGTTGCATAATTACG GCGTTTTGGTACAATCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 887; Mature: 887
Protein sequence:
>887_residues MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAAIMASQALADQQPQPVRIAKP RFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSSLSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTF NKATGVADGVIDSTLETFFSSVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPMVVTTFAGLVAGGTGAGPFAP QGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPTISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYS AMIRNGRLWTAHSFRTNAAGVASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSLDPSDDMTMWTIQQFTNATDS YGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSAGSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLN ITVAPGASAGARIVTVTNPDGQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTNPIATPGLVFFTGTISLPTVL PSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGSNGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATP LYLVWTP
Sequences:
>Translated_887_residues MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAAIMASQALADQQPQPVRIAKP RFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSSLSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTF NKATGVADGVIDSTLETFFSSVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPMVVTTFAGLVAGGTGAGPFAP QGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPTISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYS AMIRNGRLWTAHSFRTNAAGVASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSLDPSDDMTMWTIQQFTNATDS YGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSAGSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLN ITVAPGASAGARIVTVTNPDGQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTNPIATPGLVFFTGTISLPTVL PSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGSNGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATP LYLVWTP >Mature_887_residues MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAAIMASQALADQQPQPVRIAKP RFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSSLSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTF NKATGVADGVIDSTLETFFSSVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPMVVTTFAGLVAGGTGAGPFAP QGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPTISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYS AMIRNGRLWTAHSFRTNAAGVASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSLDPSDDMTMWTIQQFTNATDS YGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSAGSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLN ITVAPGASAGARIVTVTNPDGQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTNPIATPGLVFFTGTISLPTVL PSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGSNGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATP LYLVWTP
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92040; Mature: 92040
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00053 RIBOSOMAL_S8 ; PS00227 TUBULIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAA CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHH IMASQALADQQPQPVRIAKPRFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSS HHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHH LSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTFNKATGVADGVIDSTLETFFS HHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHCCCHHHHHHHHHHHHHH SVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS HHCCCCHHCCCCCCCCEEHEEECCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCC TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPM EEEEEEEEECCCCCHHHHHHCCCEEEEEEECCCHHHHCCEEECCCCEEEEECCCCCCCCH VVTTFAGLVAGGTGAGPFAPQGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPT HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCE ISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYSAMIRNGRLWTAHSFRTNAAG EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC VASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF CEECCCCCCCCEEEEEECCCCCCCCHHHCCCHHCCCCCCHHHHHHHHHEECCCCCEEEEE SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSL CCCCCCEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC DPSDDMTMWTIQQFTNATDSYGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSA CCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCC GSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLNITVAPGASAGARIVTVTNPD CCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCC GQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTN CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCC PIATPGLVFFTGTISLPTVLPSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGS CCCCCCEEEEEECEECCEEECCCCEEEECCCCHHHHHHHHCCEEEEECCCHHHEEEECCC NGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATPLYLVWTP CCCCCEEEEECCCEEEEECCCCEEEEEEEEHHCHHHCCCCEEEEECC >Mature Secondary Structure MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAA CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHH IMASQALADQQPQPVRIAKPRFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSS HHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHH LSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTFNKATGVADGVIDSTLETFFS HHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHCCCHHHHHHHHHHHHHH SVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS HHCCCCHHCCCCCCCCEEHEEECCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCC TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPM EEEEEEEEECCCCCHHHHHHCCCEEEEEEECCCHHHHCCEEECCCCEEEEECCCCCCCCH VVTTFAGLVAGGTGAGPFAPQGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPT HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCE ISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYSAMIRNGRLWTAHSFRTNAAG EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC VASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF CEECCCCCCCCEEEEEECCCCCCCCHHHCCCHHCCCCCCHHHHHHHHHEECCCCCEEEEE SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSL CCCCCCEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC DPSDDMTMWTIQQFTNATDSYGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSA CCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCC GSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLNITVAPGASAGARIVTVTNPD CCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCC GQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTN CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCC PIATPGLVFFTGTISLPTVLPSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGS CCCCCCEEEEEECEECCEEECCCCEEEECCCCHHHHHHHHCCEEEEECCCHHHEEEECCC NGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATPLYLVWTP CCCCCEEEEECCCEEEEECCCCEEEEEEEEHHCHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA