| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is capA [H]
Identifier: 159898763
GI number: 159898763
Start: 2858501
End: 2859625
Strand: Direct
Name: capA [H]
Synonym: Haur_2242
Alternate gene names: 159898763
Gene position: 2858501-2859625 (Clockwise)
Preceding gene: 159898759
Following gene: 159898764
Centisome position: 45.04
GC content: 51.2
Gene sequence:
>1125_bases ATGCGACGTTTGAGTTTTTGGATACTCTTAGGAATAATTTTAGCAGCCTGCGGGAGCAGCACGCCCACCACTGAGCCAAG CCAATTGGCACTTGCCCCAACCGCAACGATTGCGGTAACTGTAACCGCCGCACCAACCAACTCTCCCGAACCAACCAGTA CAACCCTGCCAACCGTAACCACTGAGCCAAGCCCAACCCCTGAACCTAAAATCGAATTGGCAGTGGTTGGTGATATTATG CTAGCTCGCTCGATCGGCGAGCGCATTCTTAGCGATAGCCCTGAGCAGCCCTTTGCCGGAGTGCGCGATGAATTAGTTAA TGCCGACCTGACGATTGGCAATCTTGAAACGGCAATTGCTGATGCTGGCGAACCTGCGCCCAAAGCCTACCGTTTTTTAG CGCCCCCCGAAAGTGTTGATAGCCTTAGCGATGCAGGCTTTGATCTAGTTTCGCTGGCCAATAATCATAGCCTCGATTGG GGTGAATCGGCTTTAAGCGAGACAATTGGCCTATTGAATGAGGCTGAGATTGCCAATGTTGGTGCAGGCATGAACGCCGA ACAGGCCTATCGTCCAGTTATTATCGAGAAACATGGCTTGCGTTTGGCGTTTCTGGCCTATGTGAATGTGCCAGTTGAGC GTGGCGGATTTGTAACCGAATCGTGGACAGCCACTGCCGAACAAGCAGGCTTGGCTTGGGCCGAACCAGCAGTGATCGCG GCTGATGTCGCGGCAATTCGGCCAAGCGTCGATCATGTGATTATCTTGCTGCATAGCGGCTATGAAGGGATTGATCAACC AAATGAGATTCAGCGAAGCAATGCCTATGCGGCACTCGACGCTGGCGCAACCTTAGTTTTGGGTGCACATCCGCACGTGT TGCAAGGCTATGAAGCCCGCCCGAATGGCCAATTTATTGCTTGGAGTTTGGGCAATTTTGTATTTGATGGCTTCGATGGT ACACCTAGTCTTGATAGTGCCATTTTACATTTGACCCTCGATAAAACGAGAGTCATCGCCTCACGCTGGACACCAGTCCG CTTGATCGATGGCTATCCACAGGCGCTCGATCCCACAACTGATGGAGCCTATATCATTGAAAAAATTGAGCAATTGAGCA ATTAA
Upstream 100 bases:
>100_bases ATATTCGCGCATTGTGGACATACACATTATACATCGCCTACAATTAACTCCTATGCTACTCTATCGCTACAGCAACTCGT TAAACAGGAAGGATGTTTGT
Downstream 100 bases:
>100_bases TCCATCAAGTACACTCGACATTCCTCCGCACACTATCCAAAAAGTACCATACCTGGAACCATTCTCAGGTTAAGACCTGA GAATGGTTCCAATCAAGGCC
Product: putative poly-gamma-glutamate biosynthesis (capsule formation)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRRLSFWILLGIILAACGSSTPTTEPSQLALAPTATIAVTVTAAPTNSPEPTSTTLPTVTTEPSPTPEPKIELAVVGDIM LARSIGERILSDSPEQPFAGVRDELVNADLTIGNLETAIADAGEPAPKAYRFLAPPESVDSLSDAGFDLVSLANNHSLDW GESALSETIGLLNEAEIANVGAGMNAEQAYRPVIIEKHGLRLAFLAYVNVPVERGGFVTESWTATAEQAGLAWAEPAVIA ADVAAIRPSVDHVIILLHSGYEGIDQPNEIQRSNAYAALDAGATLVLGAHPHVLQGYEARPNGQFIAWSLGNFVFDGFDG TPSLDSAILHLTLDKTRVIASRWTPVRLIDGYPQALDPTTDGAYIIEKIEQLSN
Sequences:
>Translated_374_residues MRRLSFWILLGIILAACGSSTPTTEPSQLALAPTATIAVTVTAAPTNSPEPTSTTLPTVTTEPSPTPEPKIELAVVGDIM LARSIGERILSDSPEQPFAGVRDELVNADLTIGNLETAIADAGEPAPKAYRFLAPPESVDSLSDAGFDLVSLANNHSLDW GESALSETIGLLNEAEIANVGAGMNAEQAYRPVIIEKHGLRLAFLAYVNVPVERGGFVTESWTATAEQAGLAWAEPAVIA ADVAAIRPSVDHVIILLHSGYEGIDQPNEIQRSNAYAALDAGATLVLGAHPHVLQGYEARPNGQFIAWSLGNFVFDGFDG TPSLDSAILHLTLDKTRVIASRWTPVRLIDGYPQALDPTTDGAYIIEKIEQLSN >Mature_374_residues MRRLSFWILLGIILAACGSSTPTTEPSQLALAPTATIAVTVTAAPTNSPEPTSTTLPTVTTEPSPTPEPKIELAVVGDIM LARSIGERILSDSPEQPFAGVRDELVNADLTIGNLETAIADAGEPAPKAYRFLAPPESVDSLSDAGFDLVSLANNHSLDW GESALSETIGLLNEAEIANVGAGMNAEQAYRPVIIEKHGLRLAFLAYVNVPVERGGFVTESWTATAEQAGLAWAEPAVIA ADVAAIRPSVDHVIILLHSGYEGIDQPNEIQRSNAYAALDAGATLVLGAHPHVLQGYEARPNGQFIAWSLGNFVFDGFDG TPSLDSAILHLTLDKTRVIASRWTPVRLIDGYPQALDPTTDGAYIIEKIEQLSN
Specific function: Essential for the synthesis of the polyglutamate capsule of B.anthracis which is one of the principal virulence factors during anthrax infection. May form a polyglutamyl synthetase complex together with proteins CapB and CapC [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 39647; Mature: 39647
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLSFWILLGIILAACGSSTPTTEPSQLALAPTATIAVTVTAAPTNSPEPTSTTLPTVT CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCEEE TEPSPTPEPKIELAVVGDIMLARSIGERILSDSPEQPFAGVRDELVNADLTIGNLETAIA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCHHHHHH DAGEPAPKAYRFLAPPESVDSLSDAGFDLVSLANNHSLDWGESALSETIGLLNEAEIANV CCCCCCCHHEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHC GAGMNAEQAYRPVIIEKHGLRLAFLAYVNVPVERGGFVTESWTATAEQAGLAWAEPAVIA CCCCCHHHCCCCEEEECCCCEEEEEEEEECCHHCCCEEECCCCCHHHHCCCCCCCCCHHH ADVAAIRPSVDHVIILLHSGYEGIDQPNEIQRSNAYAALDAGATLVLGAHPHVLQGYEAR HHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCCEEEECCCCEEEEECCCHHHCCCCCC PNGQFIAWSLGNFVFDGFDGTPSLDSAILHLTLDKTRVIASRWTPVRLIDGYPQALDPTT CCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCEEHHHCCCCEEEECCCCCCCCCCC DGAYIIEKIEQLSN CCHHHHHHHHHHCC >Mature Secondary Structure MRRLSFWILLGIILAACGSSTPTTEPSQLALAPTATIAVTVTAAPTNSPEPTSTTLPTVT CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCEEE TEPSPTPEPKIELAVVGDIMLARSIGERILSDSPEQPFAGVRDELVNADLTIGNLETAIA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCHHHHHH DAGEPAPKAYRFLAPPESVDSLSDAGFDLVSLANNHSLDWGESALSETIGLLNEAEIANV CCCCCCCHHEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHC GAGMNAEQAYRPVIIEKHGLRLAFLAYVNVPVERGGFVTESWTATAEQAGLAWAEPAVIA CCCCCHHHCCCCEEEECCCCEEEEEEEEECCHHCCCEEECCCCCHHHHCCCCCCCCCHHH ADVAAIRPSVDHVIILLHSGYEGIDQPNEIQRSNAYAALDAGATLVLGAHPHVLQGYEAR HHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCCEEEECCCCEEEEECCCHHHCCCCCC PNGQFIAWSLGNFVFDGFDGTPSLDSAILHLTLDKTRVIASRWTPVRLIDGYPQALDPTT CCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCEEHHHCCCCEEEECCCCCCCCCCC DGAYIIEKIEQLSN CCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536679; 10475962; 12004073 [H]