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The map label for this gene is yrdA [C]

Identifier: 159898760

GI number: 159898760

Start: 2856364

End: 2856906

Strand: Reverse

Name: yrdA [C]

Synonym: Haur_2239

Alternate gene names: 159898760

Gene position: 2856906-2856364 (Counterclockwise)

Preceding gene: 159898761

Following gene: 159898758

Centisome position: 45.01

GC content: 53.78

Gene sequence:

>543_bases
ATGTTTTTGCCTAGAGGTGTGTTGGTGGAATATCAATTTCCCTGTGTGATTGATCGGGTTTCACGTGCCGAAGGGGTGTA
TATTGCGCCTCAAGCCTTGGTTTGTGGCGCAGTCGAGTTGGCCGCCGATGTGAGTGTTTGGCCCATGACCGTGATTCGCG
GTGATAAAGGCCTGATTCGGATCGGCGCAGGCTGTAATATTCAGGATGGCTCAATTTTGCATGCCGACCCTGATGCTTGG
CTGACGATCGGCGCAGGCGTAAGCATCGGCCATGGTGCGATTGTGCATGGCTGTACGGTTGGCGACGATGTGCTAATTGG
TATGGGGGCGGTGATTTTGAACCATGCTCAGATTGGGCGTGGCTCGTTGATTGGGGCGCGGGCTTTAGTTACCGAGGGAA
TGATCGTGCCGCCCAATTCGCTGGTTTTGGGCATTCCAGGCAAAATTCGGCCATTAGATGATGCGCATCTTGAGCGGATT
CGCCGCACTGCCGAAAATTATATCGCCCTGAAAAATGCCTACCTTGCGGCAGCACAGGGTTAG

Upstream 100 bases:

>100_bases
GGCCGCCCAGGCCGTTTAGAAGTGGCAGTGCAGTTCGATCAAGAGGCCCAAATTATTAGCTCACGGATTGGCGGCGAGGC
TTTGACGATTCTGCGTGGCC

Downstream 100 bases:

>100_bases
TTGCAGGCTCAACAATTCCAGTCCAATGGCAATTCATGTTCACAGACAGCACAGACAAACCATTGATCTTTGATCAGATT
AATCATGCCACAGGCTGGGC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MFLPRGVLVEYQFPCVIDRVSRAEGVYIAPQALVCGAVELAADVSVWPMTVIRGDKGLIRIGAGCNIQDGSILHADPDAW
LTIGAGVSIGHGAIVHGCTVGDDVLIGMGAVILNHAQIGRGSLIGARALVTEGMIVPPNSLVLGIPGKIRPLDDAHLERI
RRTAENYIALKNAYLAAAQG

Sequences:

>Translated_180_residues
MFLPRGVLVEYQFPCVIDRVSRAEGVYIAPQALVCGAVELAADVSVWPMTVIRGDKGLIRIGAGCNIQDGSILHADPDAW
LTIGAGVSIGHGAIVHGCTVGDDVLIGMGAVILNHAQIGRGSLIGARALVTEGMIVPPNSLVLGIPGKIRPLDDAHLERI
RRTAENYIALKNAYLAAAQG
>Mature_180_residues
MFLPRGVLVEYQFPCVIDRVSRAEGVYIAPQALVCGAVELAADVSVWPMTVIRGDKGLIRIGAGCNIQDGSILHADPDAW
LTIGAGVSIGHGAIVHGCTVGDDVLIGMGAVILNHAQIGRGSLIGARALVTEGMIVPPNSLVLGIPGKIRPLDDAHLERI
RRTAENYIALKNAYLAAAQG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=158, Percent_Identity=44.3037974683544, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI87081681, Length=145, Percent_Identity=37.2413793103448, Blast_Score=97, Evalue=5e-22,
Organism=Escherichia coli, GI1787667, Length=148, Percent_Identity=37.1621621621622, Blast_Score=97, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18836; Mature: 18836

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLPRGVLVEYQFPCVIDRVSRAEGVYIAPQALVCGAVELAADVSVWPMTVIRGDKGLIR
CCCCCCEEEEEECCHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
IGAGCNIQDGSILHADPDAWLTIGAGVSIGHGAIVHGCTVGDDVLIGMGAVILNHAQIGR
ECCCCCCCCCCEEEECCCCEEEEECCCEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCC
GSLIGARALVTEGMIVPPNSLVLGIPGKIRPLDDAHLERIRRTAENYIALKNAYLAAAQG
CCEECHHHHHHCCEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECEEEEECCC
>Mature Secondary Structure
MFLPRGVLVEYQFPCVIDRVSRAEGVYIAPQALVCGAVELAADVSVWPMTVIRGDKGLIR
CCCCCCEEEEEECCHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
IGAGCNIQDGSILHADPDAWLTIGAGVSIGHGAIVHGCTVGDDVLIGMGAVILNHAQIGR
ECCCCCCCCCCEEEECCCCEEEEECCCEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCC
GSLIGARALVTEGMIVPPNSLVLGIPGKIRPLDDAHLERIRRTAENYIALKNAYLAAAQG
CCEECHHHHHHCCEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]