| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898758
Identifier: 159898758
GI number: 159898758
Start: 2855483
End: 2855842
Strand: Reverse
Name: 159898758
Synonym: Haur_2237
Alternate gene names: NA
Gene position: 2855842-2855483 (Counterclockwise)
Preceding gene: 159898760
Following gene: 159898746
Centisome position: 45.0
GC content: 42.5
Gene sequence:
>360_bases ATGACCTATCCGCTGATCAAAGAATATGTGTTTGATCTTCAGCAAAAACTACCAAGTTTGCATAATATTGTGCTTTCGCA CCCCGATTTTATGGCGGCTGCAAACGACAATCATGCAATTGTGCGCTTGCCCCACGGCATTCAGATTACCAAAAATCTCA TTCTTACCTTGAATGAGCCGATCGACACCTACATCATATTCCGTGATTTGCAGCAGACGTTTGCGTTGTTTGCCGTCAAT TCAAAGACTGTATTGATTTGTTATAGCGATACGTCCCTTCGGCTAGGTATGCTCATCTCAGATCTGATTATGAGTGCACG AGAAATTCGCGATTTACTAACGAATGGTACTAGCGAATAG
Upstream 100 bases:
>100_bases CATCGGCAATAGTACGAATGATGTGGCGCTGCGAACGCTCATTCCATGCGTGTAGCAATGCTAGTGGCCCAATATAGGGA TATAGGTGAGGCATTCGATT
Downstream 100 bases:
>100_bases GATCATGCCCTCACCCTCTAGCCCCCGCTCCCGCACGCGAGCGAGGGGGAACCCCAAGACCAAAACTCCCCTCTCCCACA GCGGCGGGAGAGGAGTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTYPLIKEYVFDLQQKLPSLHNIVLSHPDFMAAANDNHAIVRLPHGIQITKNLILTLNEPIDTYIIFRDLQQTFALFAVN SKTVLICYSDTSLRLGMLISDLIMSAREIRDLLTNGTSE
Sequences:
>Translated_119_residues MTYPLIKEYVFDLQQKLPSLHNIVLSHPDFMAAANDNHAIVRLPHGIQITKNLILTLNEPIDTYIIFRDLQQTFALFAVN SKTVLICYSDTSLRLGMLISDLIMSAREIRDLLTNGTSE >Mature_118_residues TYPLIKEYVFDLQQKLPSLHNIVLSHPDFMAAANDNHAIVRLPHGIQITKNLILTLNEPIDTYIIFRDLQQTFALFAVNS KTVLICYSDTSLRLGMLISDLIMSAREIRDLLTNGTSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13518; Mature: 13387
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPLIKEYVFDLQQKLPSLHNIVLSHPDFMAAANDNHAIVRLPHGIQITKNLILTLNEP CCCHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEECCCCCEEECEEEEEECCC IDTYIIFRDLQQTFALFAVNSKTVLICYSDTSLRLGMLISDLIMSAREIRDLLTNGTSE CHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TYPLIKEYVFDLQQKLPSLHNIVLSHPDFMAAANDNHAIVRLPHGIQITKNLILTLNEP CCHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEECCCCCEEECEEEEEECCC IDTYIIFRDLQQTFALFAVNSKTVLICYSDTSLRLGMLISDLIMSAREIRDLLTNGTSE CHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA