| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898722
Identifier: 159898722
GI number: 159898722
Start: 2797398
End: 2798132
Strand: Direct
Name: 159898722
Synonym: Haur_2201
Alternate gene names: NA
Gene position: 2797398-2798132 (Clockwise)
Preceding gene: 159898721
Following gene: 159898723
Centisome position: 44.08
GC content: 46.12
Gene sequence:
>735_bases ATGCCGATTTTACACAACCCAATCACCATGCAAGGCCAGATCGATCGCTGCTGGCTTTTGACCTACCGCATGCCGATTGA TCAATTTCAAACGTTGCTGCCTGCCGAATTAACCGCCACCGAATATCAAGGATTCGGTTTTTGGAATATTGTGATATGCC ATGTTTCGCATATGCGTCCGTGGTTTGCACCTCACTCCTTAGGGTTTAATTATTGGCATGTGGCCTATCGCATTTATGTC AATCTAAAAACTCCATATGGTATAGATCAAGGCTTGTATTTTGTGCGCAGCGATTGCGATCAGCCACTATTAGCATGGGC TGGTAATTTAGTAACTAACTTCAATTTTCATCATACACCAGTGATCGTTAAAAGCTCTGTTGAACAGACCAGTATTTCGA TTAATAGTTCAGTAGCAGCCGCCAGTGTTCAGATCAACAATCAGCAACCAGCCCAACTCGCCAGCGATTCAATCTTTGAT AACCTTGAACAAGCCGCCGCGTATCTCAAATATCCGCCGCGTGGGATCGCGCTTAGTAAACCAGGCGAAGCCAATATCGT GCGGATTGAGCGCGACGAAGCAGCTTGGCAACATCAACTCCGTCATGTCGAGCAGGCTGATGTTCAATGGCTCAAAACAT ATCCAGTGCAACCCGAAATTTGCTATGAAATTCAGCCAATTGCCTATCGCTGGTTACGCGGGTATCGACGCAAGGTCTTA TTGAACCAGCACTGA
Upstream 100 bases:
>100_bases CCCGTTGGCAAACGTGGCTACTGTGGATGTTGCTGCTCAATGGCACAGGTGCAGTTTGTTTTTATCGCTTGCGCCATCTT TTAGCGAAATGAGGTTGCTC
Downstream 100 bases:
>100_bases GGTGAGCAATGCGCATTTTTCTGACTGGAGCGAGTGGTTTTATTGGGCGGCATGTAGCAGAGGAATTGCACCAAGCAGGC CATCAATTAACCTGCTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPILHNPITMQGQIDRCWLLTYRMPIDQFQTLLPAELTATEYQGFGFWNIVICHVSHMRPWFAPHSLGFNYWHVAYRIYV NLKTPYGIDQGLYFVRSDCDQPLLAWAGNLVTNFNFHHTPVIVKSSVEQTSISINSSVAAASVQINNQQPAQLASDSIFD NLEQAAAYLKYPPRGIALSKPGEANIVRIERDEAAWQHQLRHVEQADVQWLKTYPVQPEICYEIQPIAYRWLRGYRRKVL LNQH
Sequences:
>Translated_244_residues MPILHNPITMQGQIDRCWLLTYRMPIDQFQTLLPAELTATEYQGFGFWNIVICHVSHMRPWFAPHSLGFNYWHVAYRIYV NLKTPYGIDQGLYFVRSDCDQPLLAWAGNLVTNFNFHHTPVIVKSSVEQTSISINSSVAAASVQINNQQPAQLASDSIFD NLEQAAAYLKYPPRGIALSKPGEANIVRIERDEAAWQHQLRHVEQADVQWLKTYPVQPEICYEIQPIAYRWLRGYRRKVL LNQH >Mature_243_residues PILHNPITMQGQIDRCWLLTYRMPIDQFQTLLPAELTATEYQGFGFWNIVICHVSHMRPWFAPHSLGFNYWHVAYRIYVN LKTPYGIDQGLYFVRSDCDQPLLAWAGNLVTNFNFHHTPVIVKSSVEQTSISINSSVAAASVQINNQQPAQLASDSIFDN LEQAAAYLKYPPRGIALSKPGEANIVRIERDEAAWQHQLRHVEQADVQWLKTYPVQPEICYEIQPIAYRWLRGYRRKVLL NQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28237; Mature: 28105
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILHNPITMQGQIDRCWLLTYRMPIDQFQTLLPAELTATEYQGFGFWNIVICHVSHMRP CCCCCCCEEECCCCCEEEEEEEECCHHHHHHHCCCHHHHHHCCCCCEEEEEEEEHHHCCC WFAPHSLGFNYWHVAYRIYVNLKTPYGIDQGLYFVRSDCDQPLLAWAGNLVTNFNFHHTP CCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHCCCHHCCCCCCCCC VIVKSSVEQTSISINSSVAAASVQINNQQPAQLASDSIFDNLEQAAAYLKYPPRGIALSK EEEECCCCHHEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECC PGEANIVRIERDEAAWQHQLRHVEQADVQWLKTYPVQPEICYEIQPIAYRWLRGYRRKVL CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHE LNQH ECCC >Mature Secondary Structure PILHNPITMQGQIDRCWLLTYRMPIDQFQTLLPAELTATEYQGFGFWNIVICHVSHMRP CCCCCCEEECCCCCEEEEEEEECCHHHHHHHCCCHHHHHHCCCCCEEEEEEEEHHHCCC WFAPHSLGFNYWHVAYRIYVNLKTPYGIDQGLYFVRSDCDQPLLAWAGNLVTNFNFHHTP CCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHCCCHHCCCCCCCCC VIVKSSVEQTSISINSSVAAASVQINNQQPAQLASDSIFDNLEQAAAYLKYPPRGIALSK EEEECCCCHHEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECC PGEANIVRIERDEAAWQHQLRHVEQADVQWLKTYPVQPEICYEIQPIAYRWLRGYRRKVL CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHE LNQH ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA