Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898721

Identifier: 159898721

GI number: 159898721

Start: 2796847

End: 2797389

Strand: Direct

Name: 159898721

Synonym: Haur_2200

Alternate gene names: NA

Gene position: 2796847-2797389 (Clockwise)

Preceding gene: 159898720

Following gene: 159898722

Centisome position: 44.07

GC content: 50.64

Gene sequence:

>543_bases
ATGCAAACATTTTTTCAACAATTACGCCAGCCCAAACAAAGCTTGGCCCAACAGCTTGATCAACCATTCCAACAATGGCC
TTATCGTGCATGGTTATTGCATAGCAGTTTAGCAGTTGGCGGTTCGTTGATCTTTGGCGGCTCGCTCAATCGAGCGCTCC
CACGATGGTCGCAACGTGGCGCGGCTTGGTGGCTGACCTTATCGTCTGGTGCTGGTTGGCTCGTGCTTGGCCCAGCCTTA
TTGCTCGCTAGCCGAGGCAACATTAATAGCTGTATTCAGGCATGTTTGGTAAGCATGAGCTATGGCGAGACGATTTTGTT
AATCGCGGCGCTGCTCAACTATGTGCTCAAAAGCCAAGCCTACGCCCAGCAACGCAATCTGTTATTGGTGTTGATTGCCA
ACTTGAGCATGGCCACAGCTCTCGCCGAACAACTCAGTATGATCAAGCTCGCCCGTTGGCAAACGTGGCTACTGTGGATG
TTGCTGCTCAATGGCACAGGTGCAGTTTGTTTTTATCGCTTGCGCCATCTTTTAGCGAAATGA

Upstream 100 bases:

>100_bases
CCTGCCAAGGGGTTTTCGTTTGGGCTAATTTCATGGTGTAACAAGTTTGTAACATAGCGATGTTAAGCTTAATCCATCAA
TTAGCTGTGAGATACGCCCG

Downstream 100 bases:

>100_bases
GGTTGCTCATGCCGATTTTACACAACCCAATCACCATGCAAGGCCAGATCGATCGCTGCTGGCTTTTGACCTACCGCATG
CCGATTGATCAATTTCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MQTFFQQLRQPKQSLAQQLDQPFQQWPYRAWLLHSSLAVGGSLIFGGSLNRALPRWSQRGAAWWLTLSSGAGWLVLGPAL
LLASRGNINSCIQACLVSMSYGETILLIAALLNYVLKSQAYAQQRNLLLVLIANLSMATALAEQLSMIKLARWQTWLLWM
LLLNGTGAVCFYRLRHLLAK

Sequences:

>Translated_180_residues
MQTFFQQLRQPKQSLAQQLDQPFQQWPYRAWLLHSSLAVGGSLIFGGSLNRALPRWSQRGAAWWLTLSSGAGWLVLGPAL
LLASRGNINSCIQACLVSMSYGETILLIAALLNYVLKSQAYAQQRNLLLVLIANLSMATALAEQLSMIKLARWQTWLLWM
LLLNGTGAVCFYRLRHLLAK
>Mature_180_residues
MQTFFQQLRQPKQSLAQQLDQPFQQWPYRAWLLHSSLAVGGSLIFGGSLNRALPRWSQRGAAWWLTLSSGAGWLVLGPAL
LLASRGNINSCIQACLVSMSYGETILLIAALLNYVLKSQAYAQQRNLLLVLIANLSMATALAEQLSMIKLARWQTWLLWM
LLLNGTGAVCFYRLRHLLAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20173; Mature: 20173

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFFQQLRQPKQSLAQQLDQPFQQWPYRAWLLHSSLAVGGSLIFGGSLNRALPRWSQRG
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCHHHHCCHHHCCC
AAWWLTLSSGAGWLVLGPALLLASRGNINSCIQACLVSMSYGETILLIAALLNYVLKSQA
CEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YAQQRNLLLVLIANLSMATALAEQLSMIKLARWQTWLLWMLLLNGTGAVCFYRLRHLLAK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQTFFQQLRQPKQSLAQQLDQPFQQWPYRAWLLHSSLAVGGSLIFGGSLNRALPRWSQRG
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCHHHHCCHHHCCC
AAWWLTLSSGAGWLVLGPALLLASRGNINSCIQACLVSMSYGETILLIAALLNYVLKSQA
CEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YAQQRNLLLVLIANLSMATALAEQLSMIKLARWQTWLLWMLLLNGTGAVCFYRLRHLLAK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA