| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898719
Identifier: 159898719
GI number: 159898719
Start: 2791507
End: 2793141
Strand: Direct
Name: 159898719
Synonym: Haur_2198
Alternate gene names: NA
Gene position: 2791507-2793141 (Clockwise)
Preceding gene: 159898717
Following gene: 159898720
Centisome position: 43.98
GC content: 38.1
Gene sequence:
>1635_bases ATGAAAAATACTGATGTTTTCAATAGTTTCGATTTAATTGTACCGATCACCCAGAAAACAATTAACGATCAGCTTACTCA TTTAGTTCGTCTAGGTGTCATTAATCCCGAACTAATTATCACTCAAGTGTGGGATGATCCAAACAAGCAAGATGTTTATA CAATTTTAAAATCATCAGCAGATTTACCTAAAAATTCTGATGGTAGTATTGATTCAAGTAAGCTCGATGGCTACCTTGAT GGAATACTCTTACCACAAATCTCAATCCATGAAAGTGGTACAGTTGTTTTATTATTGCTCAATTTTCTCTCTGGTACATT TGGTTATTGGGGTGGTTCGCCGCATAATCCAACCTGGATGACCGTTGATATGAGCAATTGGAAATTTGGCATTAGTGTCA ATATGGATCTTGCGACCCTCGCCAAAAATGACCTTGATCAAAAGATCAAAGTTCCCGATAATGTCCAGCAGCAACTCAGT GGATTTATTGATAATATGTTTACGGTAAACCACCTCTTTATGGATTTCGAGTCAACCGATTTAATTAATTTCGACCCAAC CGTAACCAGTGTTGGCAATGCAGGTGATGATGTTAAAAAGCAATTTGTGTTTTTTATGCAAGAATATCTTAAATCCCAAA AAGATGCTGGAAACCCGTATGTACTTGGCTATACAATGAGTGCCACCGACCAATCGAATTATGCTAGCTACGGTGATGTG CCCGACTCATTACGTCCAGTTGGCACAACCTACAATTTCTATAATGATCCAACAAATCCTGATATTAGCACCTTGAACTT TGCCCTTGTAACCAAAGGTGGCCATCAATCAATCTCAACCACGCCAGGCAATTTCGATAGCAACTGGATCAGCCCAAATG AACAATGTGATGCAAAAATGATTTATTCGCATCAAGTATTGCTCGAAGAATATTTCCTAAAACCAATTTTTCAGCAGCTC CACGATGGTATTTATGCACAAATCAAAGATCATCTTTCGGTCGATAGCGGTGCCAATTATGATCAAGCGAAGTCTGCCAC CGCCAATGGCTTTAGCTACTCGATTATTAACGATAAAGATGGCGACGATCAATATGTCAATAATTATTCAGTGCAAATTG TGAATCAAGCCCAAAGTGCTCAAGTTGATCTTAATTTTTCAGGCCATCTCTATTTTTATAAAGAACAAAGCAAAGATATG TTTTTCTGCACTGCTAAAGGTTGGGCCTGGACAGGCCTCGATTGGAGTGGCACGGTTTCATTAATTACCACAAAAGATAC TAATGGCAGACCAAATTTATCGATTACAAAACAATTTAGCATCAGTAATGTTGATAAAGGCCAAGATAAAAATAGCTGTG CTGAGGCTTGGACAATCATTGGTGATATTTTGGGATCAATCCTTGATGCATTTTCATTTGGTTTAGATGGAAATTTCTTT GCCAATCTCTTTGCTAATGCCTTTGGTATTCATATCGATAGCATTGGTAATATTGGGGTTGTGCTTGGCGATATCGGCAC AACCATCAATACCGCGCTCATCCTACCTGCTGGAAATGTATTTTTTATCAGCAATCCAACTGCCGATCCATTAGCAAATT TTTATCTCGAATTACATTATAAGTCAGAACACTAA
Upstream 100 bases:
>100_bases ACATCAACCTTATTTAGCGCAAATGAGGCAGAACGTTATTAGTCGATCACGTGAGTGAATCGATGCAAATTCTTATAGCC ATTTTTACGAGGAGTGTGTG
Downstream 100 bases:
>100_bases ACTAAAATCAATCAATTTAAAATAAAGGAGTTAGTTTTATGTCAAATTCACCTGTTGATTTAATAACCTTGCCAACGACC AATTTCTCAACTGATCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MKNTDVFNSFDLIVPITQKTINDQLTHLVRLGVINPELIITQVWDDPNKQDVYTILKSSADLPKNSDGSIDSSKLDGYLD GILLPQISIHESGTVVLLLLNFLSGTFGYWGGSPHNPTWMTVDMSNWKFGISVNMDLATLAKNDLDQKIKVPDNVQQQLS GFIDNMFTVNHLFMDFESTDLINFDPTVTSVGNAGDDVKKQFVFFMQEYLKSQKDAGNPYVLGYTMSATDQSNYASYGDV PDSLRPVGTTYNFYNDPTNPDISTLNFALVTKGGHQSISTTPGNFDSNWISPNEQCDAKMIYSHQVLLEEYFLKPIFQQL HDGIYAQIKDHLSVDSGANYDQAKSATANGFSYSIINDKDGDDQYVNNYSVQIVNQAQSAQVDLNFSGHLYFYKEQSKDM FFCTAKGWAWTGLDWSGTVSLITTKDTNGRPNLSITKQFSISNVDKGQDKNSCAEAWTIIGDILGSILDAFSFGLDGNFF ANLFANAFGIHIDSIGNIGVVLGDIGTTINTALILPAGNVFFISNPTADPLANFYLELHYKSEH
Sequences:
>Translated_544_residues MKNTDVFNSFDLIVPITQKTINDQLTHLVRLGVINPELIITQVWDDPNKQDVYTILKSSADLPKNSDGSIDSSKLDGYLD GILLPQISIHESGTVVLLLLNFLSGTFGYWGGSPHNPTWMTVDMSNWKFGISVNMDLATLAKNDLDQKIKVPDNVQQQLS GFIDNMFTVNHLFMDFESTDLINFDPTVTSVGNAGDDVKKQFVFFMQEYLKSQKDAGNPYVLGYTMSATDQSNYASYGDV PDSLRPVGTTYNFYNDPTNPDISTLNFALVTKGGHQSISTTPGNFDSNWISPNEQCDAKMIYSHQVLLEEYFLKPIFQQL HDGIYAQIKDHLSVDSGANYDQAKSATANGFSYSIINDKDGDDQYVNNYSVQIVNQAQSAQVDLNFSGHLYFYKEQSKDM FFCTAKGWAWTGLDWSGTVSLITTKDTNGRPNLSITKQFSISNVDKGQDKNSCAEAWTIIGDILGSILDAFSFGLDGNFF ANLFANAFGIHIDSIGNIGVVLGDIGTTINTALILPAGNVFFISNPTADPLANFYLELHYKSEH >Mature_544_residues MKNTDVFNSFDLIVPITQKTINDQLTHLVRLGVINPELIITQVWDDPNKQDVYTILKSSADLPKNSDGSIDSSKLDGYLD GILLPQISIHESGTVVLLLLNFLSGTFGYWGGSPHNPTWMTVDMSNWKFGISVNMDLATLAKNDLDQKIKVPDNVQQQLS GFIDNMFTVNHLFMDFESTDLINFDPTVTSVGNAGDDVKKQFVFFMQEYLKSQKDAGNPYVLGYTMSATDQSNYASYGDV PDSLRPVGTTYNFYNDPTNPDISTLNFALVTKGGHQSISTTPGNFDSNWISPNEQCDAKMIYSHQVLLEEYFLKPIFQQL HDGIYAQIKDHLSVDSGANYDQAKSATANGFSYSIINDKDGDDQYVNNYSVQIVNQAQSAQVDLNFSGHLYFYKEQSKDM FFCTAKGWAWTGLDWSGTVSLITTKDTNGRPNLSITKQFSISNVDKGQDKNSCAEAWTIIGDILGSILDAFSFGLDGNFF ANLFANAFGIHIDSIGNIGVVLGDIGTTINTALILPAGNVFFISNPTADPLANFYLELHYKSEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60248; Mature: 60248
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTDVFNSFDLIVPITQKTINDQLTHLVRLGVINPELIITQVWDDPNKQDVYTILKSSA CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC DLPKNSDGSIDSSKLDGYLDGILLPQISIHESGTVVLLLLNFLSGTFGYWGGSPHNPTWM CCCCCCCCCCCHHHHCHHHCCEECCEEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCCEE TVDMSNWKFGISVNMDLATLAKNDLDQKIKVPDNVQQQLSGFIDNMFTVNHLFMDFESTD EEECCCEEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEHEEEECCCCC LINFDPTVTSVGNAGDDVKKQFVFFMQEYLKSQKDAGNPYVLGYTMSATDQSNYASYGDV EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCC PDSLRPVGTTYNFYNDPTNPDISTLNFALVTKGGHQSISTTPGNFDSNWISPNEQCDAKM CCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE IYSHQVLLEEYFLKPIFQQLHDGIYAQIKDHLSVDSGANYDQAKSATANGFSYSIINDKD EHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEEECCCC GDDQYVNNYSVQIVNQAQSAQVDLNFSGHLYFYKEQSKDMFFCTAKGWAWTGLDWSGTVS CCCHHHCCEEEEEEECCCCEEEEEEECCEEEEEEECCCCEEEEEECCEEEECCCCCCEEE LITTKDTNGRPNLSITKQFSISNVDKGQDKNSCAEAWTIIGDILGSILDAFSFGLDGNFF EEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ANLFANAFGIHIDSIGNIGVVLGDIGTTINTALILPAGNVFFISNPTADPLANFYLELHY HHHHHHHHEEEEECCCCCEEEEECCCCCEEEEEEEECCCEEEEECCCCCHHEEEEEEEEE KSEH ECCC >Mature Secondary Structure MKNTDVFNSFDLIVPITQKTINDQLTHLVRLGVINPELIITQVWDDPNKQDVYTILKSSA CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC DLPKNSDGSIDSSKLDGYLDGILLPQISIHESGTVVLLLLNFLSGTFGYWGGSPHNPTWM CCCCCCCCCCCHHHHCHHHCCEECCEEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCCEE TVDMSNWKFGISVNMDLATLAKNDLDQKIKVPDNVQQQLSGFIDNMFTVNHLFMDFESTD EEECCCEEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEHEEEECCCCC LINFDPTVTSVGNAGDDVKKQFVFFMQEYLKSQKDAGNPYVLGYTMSATDQSNYASYGDV EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCC PDSLRPVGTTYNFYNDPTNPDISTLNFALVTKGGHQSISTTPGNFDSNWISPNEQCDAKM CCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE IYSHQVLLEEYFLKPIFQQLHDGIYAQIKDHLSVDSGANYDQAKSATANGFSYSIINDKD EHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEEECCCC GDDQYVNNYSVQIVNQAQSAQVDLNFSGHLYFYKEQSKDMFFCTAKGWAWTGLDWSGTVS CCCHHHCCEEEEEEECCCCEEEEEEECCEEEEEEECCCCEEEEEECCEEEECCCCCCEEE LITTKDTNGRPNLSITKQFSISNVDKGQDKNSCAEAWTIIGDILGSILDAFSFGLDGNFF EEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ANLFANAFGIHIDSIGNIGVVLGDIGTTINTALILPAGNVFFISNPTADPLANFYLELHY HHHHHHHHEEEEECCCCCEEEEECCCCCEEEEEEEECCCEEEEECCCCCHHEEEEEEEEE KSEH ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA