| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898717
Identifier: 159898717
GI number: 159898717
Start: 2787593
End: 2788135
Strand: Direct
Name: 159898717
Synonym: Haur_2196
Alternate gene names: NA
Gene position: 2787593-2788135 (Clockwise)
Preceding gene: 159898715
Following gene: 159898719
Centisome position: 43.92
GC content: 48.99
Gene sequence:
>543_bases ATGGATGTACTCTATCAATCACTAACTCCCGTGATCTGGGATATTCCCCTGAGCCTTGATCTGCTCTTGTTGGTTGAAGC TCCCAAGCCTATGACAACGCCTATCACCTGCTGGTGGGTTGCCAATCAGTTACTAGCGCTCTCGGCAAACATCGTGTGGG AGGTAGCCGATTTTAGTTGGTTTTTTGCGCTTACCGATATTCTTGTTGATAGTCACATGTTGTCCCAAGCAGAAACCATG ACCCAAGATTCGCGAATCGCGATCTATCTCGACCCCGGATTGCGCACAATCACCCTCGTCTCACCACCAGACTATCATCC TGAGAGAACGACGATTGATCGGGCAGCTGTGATAACCCTAGGAACAATGCTTACAACAACCGACCTTGATCAGACAATCC AAGGCCTTAAGCATGCCATCGAAACTCCCGATTGTGCTATAACCAACGATTTCATAGCCCAAGAAGCGGATAATCCACCG GTGGCTGATGGATTGCTTGAGTGGTGTCAGGCGTGGTTTCAAGCGCAATCGCAAACCAACTAA
Upstream 100 bases:
>100_bases TAGTTTGTTATCGTAGTCACTATGTTCACATTTGTGCTGACAAATAAACCCAATTTCCAAATTACCGCTCGTTTTGCTGA TAGAAAAGGATTTAAAGAGC
Downstream 100 bases:
>100_bases AATGATCACTTGCCCTTCTATTCGCGCAAGCAAACCCTACATCGTCCAAGCGTAGGGTTTGAGCTTTGAACTAATAATTG TAAAAACCTACAAAGTACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MDVLYQSLTPVIWDIPLSLDLLLLVEAPKPMTTPITCWWVANQLLALSANIVWEVADFSWFFALTDILVDSHMLSQAETM TQDSRIAIYLDPGLRTITLVSPPDYHPERTTIDRAAVITLGTMLTTTDLDQTIQGLKHAIETPDCAITNDFIAQEADNPP VADGLLEWCQAWFQAQSQTN
Sequences:
>Translated_180_residues MDVLYQSLTPVIWDIPLSLDLLLLVEAPKPMTTPITCWWVANQLLALSANIVWEVADFSWFFALTDILVDSHMLSQAETM TQDSRIAIYLDPGLRTITLVSPPDYHPERTTIDRAAVITLGTMLTTTDLDQTIQGLKHAIETPDCAITNDFIAQEADNPP VADGLLEWCQAWFQAQSQTN >Mature_180_residues MDVLYQSLTPVIWDIPLSLDLLLLVEAPKPMTTPITCWWVANQLLALSANIVWEVADFSWFFALTDILVDSHMLSQAETM TQDSRIAIYLDPGLRTITLVSPPDYHPERTTIDRAAVITLGTMLTTTDLDQTIQGLKHAIETPDCAITNDFIAQEADNPP VADGLLEWCQAWFQAQSQTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20116; Mature: 20116
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLYQSLTPVIWDIPLSLDLLLLVEAPKPMTTPITCWWVANQLLALSANIVWEVADFSW CCCCHHHCCCEEEECCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHEEEECCHHH FFALTDILVDSHMLSQAETMTQDSRIAIYLDPGLRTITLVSPPDYHPERTTIDRAAVITL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHH GTMLTTTDLDQTIQGLKHAIETPDCAITNDFIAQEADNPPVADGLLEWCQAWFQAQSQTN HHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDVLYQSLTPVIWDIPLSLDLLLLVEAPKPMTTPITCWWVANQLLALSANIVWEVADFSW CCCCHHHCCCEEEECCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHEEEECCHHH FFALTDILVDSHMLSQAETMTQDSRIAIYLDPGLRTITLVSPPDYHPERTTIDRAAVITL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHH GTMLTTTDLDQTIQGLKHAIETPDCAITNDFIAQEADNPPVADGLLEWCQAWFQAQSQTN HHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA