| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898714
Identifier: 159898714
GI number: 159898714
Start: 2779227
End: 2781599
Strand: Direct
Name: 159898714
Synonym: Haur_2193
Alternate gene names: NA
Gene position: 2779227-2781599 (Clockwise)
Preceding gene: 159898711
Following gene: 159898715
Centisome position: 43.79
GC content: 52.42
Gene sequence:
>2373_bases ATGCAACGTTTTTTTTCATTGATGTTGGTATTTAGTTTATTTGCGAGTCTCTTATTCAACCAAGCTACTCACGCCGCACC AAACCCATGGGCAGCCAATACGGCCTATGCGGTTGGCAGCCAAGTTAGTTACAATGGCACGATCTATGAGTGTTTACAAG CCCACACGGCCTTAGTTGGTTGGGAGCCAGCCACCACACCCGCGCTCTGGAAGCAGGTTAGTACTGCTCCAAGCGCTACG ACAATTCCCGCAACAAGCATTCCGCCAACCGCTCCCCCTGCCACAAATATTCCGCCAACTGCAACCGCAACGCCGACGGC TGGCTGTTTAAATCCAGCGGCGGGCGTTGGTTGGCAAAGCCGCAGTTTAAGCAACCAAACTGGGAATTTTAGTTTGAGCT TTGAGGCAACGCTGAGCGCTAGCCCCACCAATGCTGTGATTGGCTTGGCCAATGCTGTGCCAACCGATTACACTGGTTTA GCAATTGCTGTGCGCTTTAATCCAACTGGCTCAATCGATGCCCGCAACGGCGGAACTTATGCTGCTGCTACCAATGTGGC CTACAGTGCTAATACACGCTATCGTTTTCGGATTGTTATCAATCTTGTGGCTCATACCTACAGTGTTTATGTTACGCCGC AGACTACTAGCGAAGTTTTGATTGCCAGTAATTTTGCTTTTCGCAGCGAACAAGCCAATGTGAGCAATTTAAACACCTTG GCGACGGTGGTTGGTGGCACAGGAGCCGTTGGCTCACTCAATCTTTGCAATATCAGCCTGAATCTGCCTGCAACTCCAAC GCCGCTGCCAACCGCAACGCCAACCCCACGACCAACCGCAACCCCAGTGCCAACCGCAACTCCAGCGCCAACCGGTTATA CCCCAGCTTTTTGTGCCAACTATCCACCAGCAATCGTCGCAGGCAGTTGGCAATCATCGGTGGTCAGCTATCACAATGGG CGTTTGCAATATACCAACGATAGTGCCCAAAACCGAATTCCTGATTTTAGCTATGCTGGCTATTATTCAGGCCAACGGCC ACTGCCAAATCTGGCGGTTGTCCAAACACTCAGCCCAATCAGTGGCGATAATACCGCCCGCATTCAACAGGCACTCGATG CAATTGGCAATCGCACGCCCGATGCCAATGGTTTGCGTGGAGCATTATTGCTTGCACCTGGCCGCTACAACATCAACGGA ACCTTACGCATCAACAAAAGTGGCGTGGTGCTGCGCGGCAGTGGCGATGGCAGCGATGCTAGCACTTCCACGATTTTGCT AGGAGTTGGCAACACGCCGCATCAACGCACATTAATTGTGGTGGGCAACGGCGATTCAACCCCGTGGACGGCTGGCTCCG CCACCAACGTGACCGACCAATTTGTACAAGTTGGCAGCAAAAGCTTGAATGTAGCCGATCCCAGTCGTTTTACGGTTGGC CAAGAAGTGATTGTGCGCCACCCATCATCACAAGCATGGATCAACGCGGTCAATGGTGGCGGGGTAGTCAATGACGCTTG GTGGGCGGTCGGTGCTTTAGATATGACTTGGACGCGCCGAGTAACTAAGATTGCTGGTACAACCCTGACGCTTGATGCTC CAATTTTCAATCATTTGGATCGGGCGTTGAGCCAAGCGACGGTTGCTCCGGTTGCCAGCCGCACTATCATCGCCAATGCT GGGGTAGAAAATCTGCGGGTTGATATTCAGACCGCTGGCGGCGAGGATGAGAACCACGTTTGGGATGCAATTGGGATTGT CGGGGCAGAAAATAGCTGGGTCAAAAATGCGACAGTCTTGCACTTTGGCCATGCTGGGGTGTTTACTCAAGGCGCAATTC GCATCACGGTTGAAGATGTGCAGGCACTTGATCCAGTTGGCATTCGGACTGGTGGCCGTTTTTACAACTTCGATGCCGAA TCGAATAGCCAACTCGTGTTGTTTACGCGGGTTCATGCCACTGGCGGTCGCCACAACTTTATTTCCAATGGAACTCAAAC CACCTCGGGGATTGTTTGGCATCGTTCGACTGAAGGCGGCGGCTCGGATAGCGAAGGCCATCGTCAATGGAGCCAAGGTC TATTGTTCGACACCATTAATGCTAGTGCCGCCAGCAATATCAAGCTGATCAACCGTGGCGATTATGGCACATCGCATGGC TGGGGCAATGTGCATTCAGTCATCTGGAACTACAATCGCACGATGATGGTGCAAAAGCCGCCAACTGGCCAAAACTATGT CATCTCACAGGCTGGCACGCGTAGCACCTCGTATCCCTTCCCGGGCGCTGGTGGTTTTGCCGATATTCGCAGCGGCAGTT TAGTACCCAATTCGCTCTACGAAGCTCAACTTTGTGATCGGCTAGAACAGTGA
Upstream 100 bases:
>100_bases TAAACTTTTTATTAATACGTGTACTTGACAAATGAACAGGCGATGCTTTATACATTCACTAAAATAAGTTAATAATCTTA ACCTATTGTTAGGAGTCGTT
Downstream 100 bases:
>100_bases AGTTACCTCACTACCTCACCCGATCCTTACAAGGGTAGGTTTTAAGATCCCTCACCCCCTCTCCCACTACCATGAGCGAG GGGAGTTCCATTGTTCATGC
Product: carbohydrate-binding family V/XII protein
Products: NA
Alternate protein names: Hemagglutinin-Related Protein; Fibronectin Type III Domain Protein; Coagulation Factor 5/8 Type Domain Protein; F5/8 Type C Domain Protein; Unsaturated Glucuronyl Hydrolase; Coagulation Factor 5/8 Type Domain-Containing Protein
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVGWEPATTPALWKQVSTAPSAT TIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQSRSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGL AIAVRFNPTGSIDARNGGTYAAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCANYPPAIVAGSWQSSVVSYHNG RLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPISGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNING TLRINKSGVVLRGSGDGSDASTSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLDRALSQATVAPVASRTIIANA GVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVLHFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAE SNSQLVLFTRVHATGGRHNFISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLYEAQLCDRLEQ
Sequences:
>Translated_790_residues MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVGWEPATTPALWKQVSTAPSAT TIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQSRSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGL AIAVRFNPTGSIDARNGGTYAAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCANYPPAIVAGSWQSSVVSYHNG RLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPISGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNING TLRINKSGVVLRGSGDGSDASTSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLDRALSQATVAPVASRTIIANA GVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVLHFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAE SNSQLVLFTRVHATGGRHNFISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLYEAQLCDRLEQ >Mature_790_residues MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVGWEPATTPALWKQVSTAPSAT TIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQSRSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGL AIAVRFNPTGSIDARNGGTYAAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCANYPPAIVAGSWQSSVVSYHNG RLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPISGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNING TLRINKSGVVLRGSGDGSDASTSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLDRALSQATVAPVASRTIIANA GVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVLHFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAE SNSQLVLFTRVHATGGRHNFISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLYEAQLCDRLEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83270; Mature: 83270
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHEEEE WEPATTPALWKQVSTAPSATTIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQS CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGLAIAVRFNPTGSIDARNGGTY CCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCE AAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL EEEECEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCEECCCCCCCCCHHHH ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCAN HHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC YPPAIVAGSWQSSVVSYHNGRLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPI CCCEEEECCCHHHHHEECCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCC SGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNINGTLRINKSGVVLRGSGDGSDA CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCEEEEEECCCCEEEECCCCCCCC STSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECC QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLD CEEEEECCCCCCEEEEECCCCCCCCCHHEEEEECHHHHHHHHHHCCCEEEECCHHHHHHH RALSQATVAPVASRTIIANAGVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVL HHHHHHHHCHHHCCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEE HFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAESNSQLVLFTRVHATGGRHNF EECCCCEEECCEEEEEEEHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCC ISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCC WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLY CCCCEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCHHH EAQLCDRLEQ HHHHHHHHCC >Mature Secondary Structure MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHEEEE WEPATTPALWKQVSTAPSATTIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQS CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGLAIAVRFNPTGSIDARNGGTY CCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCE AAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL EEEECEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCEECCCCCCCCCHHHH ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCAN HHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC YPPAIVAGSWQSSVVSYHNGRLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPI CCCEEEECCCHHHHHEECCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCC SGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNINGTLRINKSGVVLRGSGDGSDA CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCEEEEEECCCCEEEECCCCCCCC STSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECC QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLD CEEEEECCCCCCEEEEECCCCCCCCCHHEEEEECHHHHHHHHHHCCCEEEECCHHHHHHH RALSQATVAPVASRTIIANAGVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVL HHHHHHHHCHHHCCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEE HFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAESNSQLVLFTRVHATGGRHNF EECCCCEEECCEEEEEEEHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCC ISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCC WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLY CCCCEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCHHH EAQLCDRLEQ HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA