The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898714

Identifier: 159898714

GI number: 159898714

Start: 2779227

End: 2781599

Strand: Direct

Name: 159898714

Synonym: Haur_2193

Alternate gene names: NA

Gene position: 2779227-2781599 (Clockwise)

Preceding gene: 159898711

Following gene: 159898715

Centisome position: 43.79

GC content: 52.42

Gene sequence:

>2373_bases
ATGCAACGTTTTTTTTCATTGATGTTGGTATTTAGTTTATTTGCGAGTCTCTTATTCAACCAAGCTACTCACGCCGCACC
AAACCCATGGGCAGCCAATACGGCCTATGCGGTTGGCAGCCAAGTTAGTTACAATGGCACGATCTATGAGTGTTTACAAG
CCCACACGGCCTTAGTTGGTTGGGAGCCAGCCACCACACCCGCGCTCTGGAAGCAGGTTAGTACTGCTCCAAGCGCTACG
ACAATTCCCGCAACAAGCATTCCGCCAACCGCTCCCCCTGCCACAAATATTCCGCCAACTGCAACCGCAACGCCGACGGC
TGGCTGTTTAAATCCAGCGGCGGGCGTTGGTTGGCAAAGCCGCAGTTTAAGCAACCAAACTGGGAATTTTAGTTTGAGCT
TTGAGGCAACGCTGAGCGCTAGCCCCACCAATGCTGTGATTGGCTTGGCCAATGCTGTGCCAACCGATTACACTGGTTTA
GCAATTGCTGTGCGCTTTAATCCAACTGGCTCAATCGATGCCCGCAACGGCGGAACTTATGCTGCTGCTACCAATGTGGC
CTACAGTGCTAATACACGCTATCGTTTTCGGATTGTTATCAATCTTGTGGCTCATACCTACAGTGTTTATGTTACGCCGC
AGACTACTAGCGAAGTTTTGATTGCCAGTAATTTTGCTTTTCGCAGCGAACAAGCCAATGTGAGCAATTTAAACACCTTG
GCGACGGTGGTTGGTGGCACAGGAGCCGTTGGCTCACTCAATCTTTGCAATATCAGCCTGAATCTGCCTGCAACTCCAAC
GCCGCTGCCAACCGCAACGCCAACCCCACGACCAACCGCAACCCCAGTGCCAACCGCAACTCCAGCGCCAACCGGTTATA
CCCCAGCTTTTTGTGCCAACTATCCACCAGCAATCGTCGCAGGCAGTTGGCAATCATCGGTGGTCAGCTATCACAATGGG
CGTTTGCAATATACCAACGATAGTGCCCAAAACCGAATTCCTGATTTTAGCTATGCTGGCTATTATTCAGGCCAACGGCC
ACTGCCAAATCTGGCGGTTGTCCAAACACTCAGCCCAATCAGTGGCGATAATACCGCCCGCATTCAACAGGCACTCGATG
CAATTGGCAATCGCACGCCCGATGCCAATGGTTTGCGTGGAGCATTATTGCTTGCACCTGGCCGCTACAACATCAACGGA
ACCTTACGCATCAACAAAAGTGGCGTGGTGCTGCGCGGCAGTGGCGATGGCAGCGATGCTAGCACTTCCACGATTTTGCT
AGGAGTTGGCAACACGCCGCATCAACGCACATTAATTGTGGTGGGCAACGGCGATTCAACCCCGTGGACGGCTGGCTCCG
CCACCAACGTGACCGACCAATTTGTACAAGTTGGCAGCAAAAGCTTGAATGTAGCCGATCCCAGTCGTTTTACGGTTGGC
CAAGAAGTGATTGTGCGCCACCCATCATCACAAGCATGGATCAACGCGGTCAATGGTGGCGGGGTAGTCAATGACGCTTG
GTGGGCGGTCGGTGCTTTAGATATGACTTGGACGCGCCGAGTAACTAAGATTGCTGGTACAACCCTGACGCTTGATGCTC
CAATTTTCAATCATTTGGATCGGGCGTTGAGCCAAGCGACGGTTGCTCCGGTTGCCAGCCGCACTATCATCGCCAATGCT
GGGGTAGAAAATCTGCGGGTTGATATTCAGACCGCTGGCGGCGAGGATGAGAACCACGTTTGGGATGCAATTGGGATTGT
CGGGGCAGAAAATAGCTGGGTCAAAAATGCGACAGTCTTGCACTTTGGCCATGCTGGGGTGTTTACTCAAGGCGCAATTC
GCATCACGGTTGAAGATGTGCAGGCACTTGATCCAGTTGGCATTCGGACTGGTGGCCGTTTTTACAACTTCGATGCCGAA
TCGAATAGCCAACTCGTGTTGTTTACGCGGGTTCATGCCACTGGCGGTCGCCACAACTTTATTTCCAATGGAACTCAAAC
CACCTCGGGGATTGTTTGGCATCGTTCGACTGAAGGCGGCGGCTCGGATAGCGAAGGCCATCGTCAATGGAGCCAAGGTC
TATTGTTCGACACCATTAATGCTAGTGCCGCCAGCAATATCAAGCTGATCAACCGTGGCGATTATGGCACATCGCATGGC
TGGGGCAATGTGCATTCAGTCATCTGGAACTACAATCGCACGATGATGGTGCAAAAGCCGCCAACTGGCCAAAACTATGT
CATCTCACAGGCTGGCACGCGTAGCACCTCGTATCCCTTCCCGGGCGCTGGTGGTTTTGCCGATATTCGCAGCGGCAGTT
TAGTACCCAATTCGCTCTACGAAGCTCAACTTTGTGATCGGCTAGAACAGTGA

Upstream 100 bases:

>100_bases
TAAACTTTTTATTAATACGTGTACTTGACAAATGAACAGGCGATGCTTTATACATTCACTAAAATAAGTTAATAATCTTA
ACCTATTGTTAGGAGTCGTT

Downstream 100 bases:

>100_bases
AGTTACCTCACTACCTCACCCGATCCTTACAAGGGTAGGTTTTAAGATCCCTCACCCCCTCTCCCACTACCATGAGCGAG
GGGAGTTCCATTGTTCATGC

Product: carbohydrate-binding family V/XII protein

Products: NA

Alternate protein names: Hemagglutinin-Related Protein; Fibronectin Type III Domain Protein; Coagulation Factor 5/8 Type Domain Protein; F5/8 Type C Domain Protein; Unsaturated Glucuronyl Hydrolase; Coagulation Factor 5/8 Type Domain-Containing Protein

Number of amino acids: Translated: 790; Mature: 790

Protein sequence:

>790_residues
MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVGWEPATTPALWKQVSTAPSAT
TIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQSRSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGL
AIAVRFNPTGSIDARNGGTYAAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL
ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCANYPPAIVAGSWQSSVVSYHNG
RLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPISGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNING
TLRINKSGVVLRGSGDGSDASTSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG
QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLDRALSQATVAPVASRTIIANA
GVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVLHFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAE
SNSQLVLFTRVHATGGRHNFISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG
WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLYEAQLCDRLEQ

Sequences:

>Translated_790_residues
MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVGWEPATTPALWKQVSTAPSAT
TIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQSRSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGL
AIAVRFNPTGSIDARNGGTYAAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL
ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCANYPPAIVAGSWQSSVVSYHNG
RLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPISGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNING
TLRINKSGVVLRGSGDGSDASTSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG
QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLDRALSQATVAPVASRTIIANA
GVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVLHFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAE
SNSQLVLFTRVHATGGRHNFISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG
WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLYEAQLCDRLEQ
>Mature_790_residues
MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVGWEPATTPALWKQVSTAPSAT
TIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQSRSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGL
AIAVRFNPTGSIDARNGGTYAAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL
ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCANYPPAIVAGSWQSSVVSYHNG
RLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPISGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNING
TLRINKSGVVLRGSGDGSDASTSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG
QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLDRALSQATVAPVASRTIIANA
GVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVLHFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAE
SNSQLVLFTRVHATGGRHNFISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG
WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLYEAQLCDRLEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83270; Mature: 83270

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHEEEE
WEPATTPALWKQVSTAPSATTIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQS
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGLAIAVRFNPTGSIDARNGGTY
CCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCE
AAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL
EEEECEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCEECCCCCCCCCHHHH
ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCAN
HHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
YPPAIVAGSWQSSVVSYHNGRLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPI
CCCEEEECCCHHHHHEECCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCC
SGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNINGTLRINKSGVVLRGSGDGSDA
CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCEEEEEECCCCEEEECCCCCCCC
STSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG
CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECC
QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLD
CEEEEECCCCCCEEEEECCCCCCCCCHHEEEEECHHHHHHHHHHCCCEEEECCHHHHHHH
RALSQATVAPVASRTIIANAGVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVL
HHHHHHHHCHHHCCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEE
HFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAESNSQLVLFTRVHATGGRHNF
EECCCCEEECCEEEEEEEHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCC
ISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG
CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCC
WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLY
CCCCEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCHHH
EAQLCDRLEQ
HHHHHHHHCC
>Mature Secondary Structure
MQRFFSLMLVFSLFASLLFNQATHAAPNPWAANTAYAVGSQVSYNGTIYECLQAHTALVG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHEEEE
WEPATTPALWKQVSTAPSATTIPATSIPPTAPPATNIPPTATATPTAGCLNPAAGVGWQS
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RSLSNQTGNFSLSFEATLSASPTNAVIGLANAVPTDYTGLAIAVRFNPTGSIDARNGGTY
CCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCE
AAATNVAYSANTRYRFRIVINLVAHTYSVYVTPQTTSEVLIASNFAFRSEQANVSNLNTL
EEEECEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCEECCCCCCCCCHHHH
ATVVGGTGAVGSLNLCNISLNLPATPTPLPTATPTPRPTATPVPTATPAPTGYTPAFCAN
HHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
YPPAIVAGSWQSSVVSYHNGRLQYTNDSAQNRIPDFSYAGYYSGQRPLPNLAVVQTLSPI
CCCEEEECCCHHHHHEECCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCC
SGDNTARIQQALDAIGNRTPDANGLRGALLLAPGRYNINGTLRINKSGVVLRGSGDGSDA
CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCEEEEEECCCCEEEECCCCCCCC
STSTILLGVGNTPHQRTLIVVGNGDSTPWTAGSATNVTDQFVQVGSKSLNVADPSRFTVG
CCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECC
QEVIVRHPSSQAWINAVNGGGVVNDAWWAVGALDMTWTRRVTKIAGTTLTLDAPIFNHLD
CEEEEECCCCCCEEEEECCCCCCCCCHHEEEEECHHHHHHHHHHCCCEEEECCHHHHHHH
RALSQATVAPVASRTIIANAGVENLRVDIQTAGGEDENHVWDAIGIVGAENSWVKNATVL
HHHHHHHHCHHHCCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEE
HFGHAGVFTQGAIRITVEDVQALDPVGIRTGGRFYNFDAESNSQLVLFTRVHATGGRHNF
EECCCCEEECCEEEEEEEHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCC
ISNGTQTTSGIVWHRSTEGGGSDSEGHRQWSQGLLFDTINASAASNIKLINRGDYGTSHG
CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCC
WGNVHSVIWNYNRTMMVQKPPTGQNYVISQAGTRSTSYPFPGAGGFADIRSGSLVPNSLY
CCCCEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCHHH
EAQLCDRLEQ
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA