Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898711

Identifier: 159898711

GI number: 159898711

Start: 2774370

End: 2775638

Strand: Direct

Name: 159898711

Synonym: Haur_2190

Alternate gene names: NA

Gene position: 2774370-2775638 (Clockwise)

Preceding gene: 159898710

Following gene: 159898714

Centisome position: 43.71

GC content: 44.76

Gene sequence:

>1269_bases
ATGCGTATAGTATCCCTACCAGCTCGTCAATCGATTCAGCGTTTGCTCGGCGAGCATTTAAAAAAACGTCCAGGCCTGTG
GCTCTTTATAAGCATGATGTTGGTTAATGCAGGGAATTATGGGTTTAATGTTTTGGTCGGGCGCTGGCTTGGGCCATCGG
CTTACGCCGAAATTAATTTAATGATTACCTTGTTTTTGATTGCAACCTTTATTACAAGTGGCTTGCAGATGAGTGCTGCT
CGAGCAATTGTTGGCTCAAATAACCAGGCTATCTTAACCATGTTGCGACGGGTTGCTTGGGTTTGTGGTGGCTTAAGCTT
GCTCGGTTTGGGGCTTTTTGCAGCATTTTGGCAAACCCTGTTTCACACAGCTAGTGCCAGCCCATTTATTATCTTAGGGG
TTGGGCTAGCCTGTTATTATGCCTTGGGCGTTGAGCGCGGTATTGCCCAAGGATGTGCGCATTTTGGGCGCTTGGCTTGG
AATTTTCAGATCGAGATGGCTGTTCGACTGATGGGAGCATGCGTCTTTGTTGGATTAGGTATGGGTGTCGCTGGTGCAAC
GATCGCTTTAAGTAGTTCGATTGTCATTGCATGGTTGGATAGTAGGAGATCTTATGCTACGGTTGAGCAACATAGAACGA
ACAATTCTATCCAGCTGCAAATGATGCTTCCGATTATCATCCATCTTTTGGGTCAAGTTTTAATTAATAATAGCGATGTG
TTGTTGGTCAAAGCATGGTTTCCGGCAATGATTGCTGGCCAATATGCAGCCTTAGCGCTCATAGGACGGGTTGTGTTTTT
TGCAACAGCCACCTTAGGTACCATTCTCTTTCCCCGAGTGTTACGTTCTACCCAACATAGCGAACAACAACGACTTTTCT
GGCAAAGTATTATGATAACCGTGGCGATTGCGGGACTGATTACTTTGTTATGTAAAATTATACCGCAACTAATCCTTGGA
TGGCTTTTTGGTGAGGCCTATCTTCCCATCGCAGATTTCTTATGGCTATATGCGGTGGCAACGAGTTGTTATGCCATTGC
TAATATTAGCATCACGTATCAGCTTGCTCAGGATCGTTCATTTGGTGCATGGATTGCTCTGCTTGCAGGTAGCATTCAAA
TCGGGGTAATGAGCTGGTTCAATCAGAGTATTCACCAGATTTTATATAGCCAAGTTGGAGTGATGCTTGGTTTACTATTG
GTGCTTATGCTCTACGAATTCTATAGGGCTCGTGCACGGCAGAAATTCTCAAAATCCAGGGTAATTTGA

Upstream 100 bases:

>100_bases
TTGATCGCGTCTTCACTAGTAGCCCATCGGTTGAATCAGCCTTGAGTATCTGGTAGACCATAGCGCAAATAGCTATCTAA
GCTCTATTGAAGGATGCCCT

Downstream 100 bases:

>100_bases
TTGCGATGTTGAGGGGCATGGCTTCACGCCATGCCCTATTAATTTAGTGCTTACTTTGCGGCCAAGAAACCGCGCTGCAA
AATCGATTGAATAATCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Transporter; Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINLMITLFLIATFITSGLQMSAA
RAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTLFHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAW
NFQIEMAVRLMGACVFVGLGMGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV
LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMITVAIAGLITLLCKIIPQLILG
WLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRSFGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLL
VLMLYEFYRARARQKFSKSRVI

Sequences:

>Translated_422_residues
MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINLMITLFLIATFITSGLQMSAA
RAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTLFHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAW
NFQIEMAVRLMGACVFVGLGMGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV
LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMITVAIAGLITLLCKIIPQLILG
WLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRSFGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLL
VLMLYEFYRARARQKFSKSRVI
>Mature_422_residues
MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINLMITLFLIATFITSGLQMSAA
RAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTLFHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAW
NFQIEMAVRLMGACVFVGLGMGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV
LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMITVAIAGLITLLCKIIPQLILG
WLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRSFGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLL
VLMLYEFYRARARQKFSKSRVI

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46548; Mature: 46548

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINL
CCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCHHHHHHH
MITLFLIATFITSGLQMSAARAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTL
HHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAWNFQIEMAVRLMGACVFVGLG
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHC
MGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV
CCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCE
LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMIT
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VAIAGLITLLCKIIPQLILGWLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC
FGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLLVLMLYEFYRARARQKFSKSR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VI
CC
>Mature Secondary Structure
MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINL
CCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCHHHHHHH
MITLFLIATFITSGLQMSAARAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTL
HHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAWNFQIEMAVRLMGACVFVGLG
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHC
MGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV
CCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCE
LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMIT
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VAIAGLITLLCKIIPQLILGWLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC
FGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLLVLMLYEFYRARARQKFSKSR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA