| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898711
Identifier: 159898711
GI number: 159898711
Start: 2774370
End: 2775638
Strand: Direct
Name: 159898711
Synonym: Haur_2190
Alternate gene names: NA
Gene position: 2774370-2775638 (Clockwise)
Preceding gene: 159898710
Following gene: 159898714
Centisome position: 43.71
GC content: 44.76
Gene sequence:
>1269_bases ATGCGTATAGTATCCCTACCAGCTCGTCAATCGATTCAGCGTTTGCTCGGCGAGCATTTAAAAAAACGTCCAGGCCTGTG GCTCTTTATAAGCATGATGTTGGTTAATGCAGGGAATTATGGGTTTAATGTTTTGGTCGGGCGCTGGCTTGGGCCATCGG CTTACGCCGAAATTAATTTAATGATTACCTTGTTTTTGATTGCAACCTTTATTACAAGTGGCTTGCAGATGAGTGCTGCT CGAGCAATTGTTGGCTCAAATAACCAGGCTATCTTAACCATGTTGCGACGGGTTGCTTGGGTTTGTGGTGGCTTAAGCTT GCTCGGTTTGGGGCTTTTTGCAGCATTTTGGCAAACCCTGTTTCACACAGCTAGTGCCAGCCCATTTATTATCTTAGGGG TTGGGCTAGCCTGTTATTATGCCTTGGGCGTTGAGCGCGGTATTGCCCAAGGATGTGCGCATTTTGGGCGCTTGGCTTGG AATTTTCAGATCGAGATGGCTGTTCGACTGATGGGAGCATGCGTCTTTGTTGGATTAGGTATGGGTGTCGCTGGTGCAAC GATCGCTTTAAGTAGTTCGATTGTCATTGCATGGTTGGATAGTAGGAGATCTTATGCTACGGTTGAGCAACATAGAACGA ACAATTCTATCCAGCTGCAAATGATGCTTCCGATTATCATCCATCTTTTGGGTCAAGTTTTAATTAATAATAGCGATGTG TTGTTGGTCAAAGCATGGTTTCCGGCAATGATTGCTGGCCAATATGCAGCCTTAGCGCTCATAGGACGGGTTGTGTTTTT TGCAACAGCCACCTTAGGTACCATTCTCTTTCCCCGAGTGTTACGTTCTACCCAACATAGCGAACAACAACGACTTTTCT GGCAAAGTATTATGATAACCGTGGCGATTGCGGGACTGATTACTTTGTTATGTAAAATTATACCGCAACTAATCCTTGGA TGGCTTTTTGGTGAGGCCTATCTTCCCATCGCAGATTTCTTATGGCTATATGCGGTGGCAACGAGTTGTTATGCCATTGC TAATATTAGCATCACGTATCAGCTTGCTCAGGATCGTTCATTTGGTGCATGGATTGCTCTGCTTGCAGGTAGCATTCAAA TCGGGGTAATGAGCTGGTTCAATCAGAGTATTCACCAGATTTTATATAGCCAAGTTGGAGTGATGCTTGGTTTACTATTG GTGCTTATGCTCTACGAATTCTATAGGGCTCGTGCACGGCAGAAATTCTCAAAATCCAGGGTAATTTGA
Upstream 100 bases:
>100_bases TTGATCGCGTCTTCACTAGTAGCCCATCGGTTGAATCAGCCTTGAGTATCTGGTAGACCATAGCGCAAATAGCTATCTAA GCTCTATTGAAGGATGCCCT
Downstream 100 bases:
>100_bases TTGCGATGTTGAGGGGCATGGCTTCACGCCATGCCCTATTAATTTAGTGCTTACTTTGCGGCCAAGAAACCGCGCTGCAA AATCGATTGAATAATCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Polysaccharide Transporter; Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINLMITLFLIATFITSGLQMSAA RAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTLFHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAW NFQIEMAVRLMGACVFVGLGMGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMITVAIAGLITLLCKIIPQLILG WLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRSFGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLL VLMLYEFYRARARQKFSKSRVI
Sequences:
>Translated_422_residues MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINLMITLFLIATFITSGLQMSAA RAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTLFHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAW NFQIEMAVRLMGACVFVGLGMGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMITVAIAGLITLLCKIIPQLILG WLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRSFGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLL VLMLYEFYRARARQKFSKSRVI >Mature_422_residues MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINLMITLFLIATFITSGLQMSAA RAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTLFHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAW NFQIEMAVRLMGACVFVGLGMGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMITVAIAGLITLLCKIIPQLILG WLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRSFGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLL VLMLYEFYRARARQKFSKSRVI
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46548; Mature: 46548
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINL CCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCHHHHHHH MITLFLIATFITSGLQMSAARAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTL HHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAWNFQIEMAVRLMGACVFVGLG HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHC MGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV CCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCE LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMIT EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VAIAGLITLLCKIIPQLILGWLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC FGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLLVLMLYEFYRARARQKFSKSR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VI CC >Mature Secondary Structure MRIVSLPARQSIQRLLGEHLKKRPGLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINL CCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCHHHHHHH MITLFLIATFITSGLQMSAARAIVGSNNQAILTMLRRVAWVCGGLSLLGLGLFAAFWQTL HHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FHTASASPFIILGVGLACYYALGVERGIAQGCAHFGRLAWNFQIEMAVRLMGACVFVGLG HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHC MGVAGATIALSSSIVIAWLDSRRSYATVEQHRTNNSIQLQMMLPIIIHLLGQVLINNSDV CCHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCE LLVKAWFPAMIAGQYAALALIGRVVFFATATLGTILFPRVLRSTQHSEQQRLFWQSIMIT EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VAIAGLITLLCKIIPQLILGWLFGEAYLPIADFLWLYAVATSCYAIANISITYQLAQDRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC FGAWIALLAGSIQIGVMSWFNQSIHQILYSQVGVMLGLLLVLMLYEFYRARARQKFSKSR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA