| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898710
Identifier: 159898710
GI number: 159898710
Start: 2773990
End: 2774325
Strand: Direct
Name: 159898710
Synonym: Haur_2189
Alternate gene names: NA
Gene position: 2773990-2774325 (Clockwise)
Preceding gene: 159898709
Following gene: 159898711
Centisome position: 43.71
GC content: 46.13
Gene sequence:
>336_bases ATGAGCATTGCTAGCCAAACGAAAGTAATTAATATTGGTATTTTAACCCTCAGCGATCGCTTTGATATCGCCGCATTATC AACCTTTCGCCAAGCAGCCGATCACATTCTGGCCCAAACTAACTACCTTGTGATTGATATGGCTGCGGTGAGTTTTTTTG ATAGCGCTGGGATGGCGGCATTAGTAAATGTGCTTAAACGTGTTCGCGAACAAGCAGGTGATATTCGCGTTGTTTGGCCA ATAGCCGAAGCTGCCCGCCGAATTGTCAGTCTCACAAAGTTTGATCGCGTCTTCACTAGTAGCCCATCGGTTGAATCAGC CTTGAGTATCTGGTAG
Upstream 100 bases:
>100_bases TATGGATTATTTATCGTTGAACAAGTGCTGGATTCGCTATGTTATCGACGCACTGCAACAGGCAATCATTGGCAGTTAAT CAAACAATTAGGAGCAACAT
Downstream 100 bases:
>100_bases ACCATAGCGCAAATAGCTATCTAAGCTCTATTGAAGGATGCCCTATGCGTATAGTATCCCTACCAGCTCGTCAATCGATT CAGCGTTTGCTCGGCGAGCA
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSIASQTKVINIGILTLSDRFDIAALSTFRQAADHILAQTNYLVIDMAAVSFFDSAGMAALVNVLKRVREQAGDIRVVWP IAEAARRIVSLTKFDRVFTSSPSVESALSIW
Sequences:
>Translated_111_residues MSIASQTKVINIGILTLSDRFDIAALSTFRQAADHILAQTNYLVIDMAAVSFFDSAGMAALVNVLKRVREQAGDIRVVWP IAEAARRIVSLTKFDRVFTSSPSVESALSIW >Mature_110_residues SIASQTKVINIGILTLSDRFDIAALSTFRQAADHILAQTNYLVIDMAAVSFFDSAGMAALVNVLKRVREQAGDIRVVWPI AEAARRIVSLTKFDRVFTSSPSVESALSIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12157; Mature: 12026
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIASQTKVINIGILTLSDRFDIAALSTFRQAADHILAQTNYLVIDMAAVSFFDSAGMAA CCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHH LVNVLKRVREQAGDIRVVWPIAEAARRIVSLTKFDRVFTSSPSVESALSIW HHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure SIASQTKVINIGILTLSDRFDIAALSTFRQAADHILAQTNYLVIDMAAVSFFDSAGMAA CCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHH LVNVLKRVREQAGDIRVVWPIAEAARRIVSLTKFDRVFTSSPSVESALSIW HHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA