| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898697
Identifier: 159898697
GI number: 159898697
Start: 2757201
End: 2757713
Strand: Reverse
Name: 159898697
Synonym: Haur_2176
Alternate gene names: NA
Gene position: 2757713-2757201 (Counterclockwise)
Preceding gene: 159898698
Following gene: 159898696
Centisome position: 43.45
GC content: 43.08
Gene sequence:
>513_bases ATGCGCCGATTTGGATGGATGCTTCTACTGATACTAACAGTCGGATGTAGTGTAAACTCAAAAAATAGCCAGCCGCAGCC AATTATCACTGAGACAGGCGAGCATGTAACAGTATTTCCTAATTACATTGCGATTGTTGTGCCTGGCTATGAGCTAACAT GCTTAACTGATCCAGTCTTGTCGATTCAGACTGCTGATGGCTGGCTGCCGCTTGAAGATTTTATTATGCAGCCGCATTAT CTTGATGATAAATTCAATTTTGTTGCTGGAATGTGCGATGAAGTTGGCTGCAATAAAATTAATCACGAACATCCATTGGC GATTGGTTTACCGCTCTACCAGCATATTGGCGAGCGCAAACATTTGCTTGATCGCACAGGGGAAATCAAAATGCTACCAG CCTATCGCATGGTCTCCCCAACCCAAACGGTCAAGCTTGATATAACCTATTTTCTCGATGACGCTTGTAGCAAACAGCAA ACCTATAGCACAACAATCGATTTATCCAATTAG
Upstream 100 bases:
>100_bases TCGCTGGTTTACTGGTTTGGATCAACCAAAAACTTATTGGAACAAACCCATGCACCTCCGCGTTAGCACCAAAAGCTAAT CAGCAGTTGAGGAGCGAGCT
Downstream 100 bases:
>100_bases GTCGCAAGCTACTCCTCGAAGATATCGCGATTGATGCTCCACGAAGAGCACGAAGAACACGAAGCTATTGATCTTTGCGC TTCTTCGCGTTCTTCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRRFGWMLLLILTVGCSVNSKNSQPQPIITETGEHVTVFPNYIAIVVPGYELTCLTDPVLSIQTADGWLPLEDFIMQPHY LDDKFNFVAGMCDEVGCNKINHEHPLAIGLPLYQHIGERKHLLDRTGEIKMLPAYRMVSPTQTVKLDITYFLDDACSKQQ TYSTTIDLSN
Sequences:
>Translated_170_residues MRRFGWMLLLILTVGCSVNSKNSQPQPIITETGEHVTVFPNYIAIVVPGYELTCLTDPVLSIQTADGWLPLEDFIMQPHY LDDKFNFVAGMCDEVGCNKINHEHPLAIGLPLYQHIGERKHLLDRTGEIKMLPAYRMVSPTQTVKLDITYFLDDACSKQQ TYSTTIDLSN >Mature_170_residues MRRFGWMLLLILTVGCSVNSKNSQPQPIITETGEHVTVFPNYIAIVVPGYELTCLTDPVLSIQTADGWLPLEDFIMQPHY LDDKFNFVAGMCDEVGCNKINHEHPLAIGLPLYQHIGERKHLLDRTGEIKMLPAYRMVSPTQTVKLDITYFLDDACSKQQ TYSTTIDLSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19231; Mature: 19231
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFGWMLLLILTVGCSVNSKNSQPQPIITETGEHVTVFPNYIAIVVPGYELTCLTDPVL CCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCCEEEEEECCEEEEEECCCCE SIQTADGWLPLEDFIMQPHYLDDKFNFVAGMCDEVGCNKINHEHPLAIGLPLYQHIGERK EEEECCCCCCHHHHHCCCCCCCCCHHHHHHCHHHCCCCCCCCCCCEEECCHHHHHCCHHH HLLDRTGEIKMLPAYRMVSPTQTVKLDITYFLDDACSKQQTYSTTIDLSN HHHCCCCCEEEECCEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MRRFGWMLLLILTVGCSVNSKNSQPQPIITETGEHVTVFPNYIAIVVPGYELTCLTDPVL CCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCCEEEEEECCEEEEEECCCCE SIQTADGWLPLEDFIMQPHYLDDKFNFVAGMCDEVGCNKINHEHPLAIGLPLYQHIGERK EEEECCCCCCHHHHHCCCCCCCCCHHHHHHCHHHCCCCCCCCCCCEEECCHHHHHCCHHH HLLDRTGEIKMLPAYRMVSPTQTVKLDITYFLDDACSKQQTYSTTIDLSN HHHCCCCCEEEECCEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA