| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898695
Identifier: 159898695
GI number: 159898695
Start: 2754472
End: 2755365
Strand: Reverse
Name: 159898695
Synonym: Haur_2174
Alternate gene names: NA
Gene position: 2755365-2754472 (Counterclockwise)
Preceding gene: 159898696
Following gene: 159898694
Centisome position: 43.41
GC content: 45.41
Gene sequence:
>894_bases ATGGGCTTTGATATAACAATTACGCGAATTACCAACCAACAACTGCTAGAGCTTGAAGCGTGTGCCGCACGCTTGCACGA GGAGAATCAGGCCAGTGCCTCAATTTGCGCGGCTGAAATCTATGAACAGGCTGATGATTTTCGCGTTGAGCACGTTTCTG ATACCCCCGAATTGACTGGAAATCCATGGCTTGATGACTACCTTGCGCCAGCGAGCTTACCTGATCAGAGTGTGATGCTT GGGATGTCAAGTGGAGAACTGACTGATAATCCGCTCTTATCGTATTTTTTACCGTTTGAGGCCTATTATGACCCCACTGA TCACACGCAATTAACAACCTCTGCGCCGTTTGAAGCTTATTATGCAGCCGCTGAACCAATCGATTATCCCACGTACCCTG ATATTAATGAAGTATATAAACAAGTTTCTGCGGTACTGGAGCAACGTAAAGGCCCCGATTTAGGCTATATTGCTACCACG GATATCGACCCACAACAGGCTTATTATGCGTTGAGTGCAACGATACATCTTTGGGAACCTGTCGAAACGTGCATGGAAAC CTTGGTTGCTGAACAAAAACTACCCGATTGGCCGATTAAGATCTTTGCTGAAGATGATCATCAGACTGCCTGCATTGGCG ATTTACATTTTGTTTACAGTACGGTGTATCGTCTGCAGGCGGTTGAAGTTCCATTGTATTTGCATGCCCTCAAGCAGCTA CCACCCAGATTGTTTAAACGCTATTTTTTTATGCAACGCCTTATGAATCGCGAACGGAATGATGCGTTGCTTATGCCATT TTTTTGTTGGGAATCGAGGATGGTAGAGAAATTGATCTTATTGTTTGAGCAAGCCGCTCGCGATCAAGATTGGTTGGTGT GGTATACCTGGTAG
Upstream 100 bases:
>100_bases GTGGTTGCGCATACCAAAACCTGTGCACATTCATAGCGGTTATGCTATAATTCGCGTACACAAAATAGAACATTTGTTCT AAAAGCCAAAGGTGATAGCA
Downstream 100 bases:
>100_bases GTTGTTCGTATGATTTAGGCTGAAACGTTGTAGTTAGAGGAACTAAGGTATGGGTGTTCGTCAATCGTTCGTTCGCATAA CCGCCGAACAACTTGCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGFDITITRITNQQLLELEACAARLHEENQASASICAAEIYEQADDFRVEHVSDTPELTGNPWLDDYLAPASLPDQSVML GMSSGELTDNPLLSYFLPFEAYYDPTDHTQLTTSAPFEAYYAAAEPIDYPTYPDINEVYKQVSAVLEQRKGPDLGYIATT DIDPQQAYYALSATIHLWEPVETCMETLVAEQKLPDWPIKIFAEDDHQTACIGDLHFVYSTVYRLQAVEVPLYLHALKQL PPRLFKRYFFMQRLMNRERNDALLMPFFCWESRMVEKLILLFEQAARDQDWLVWYTW
Sequences:
>Translated_297_residues MGFDITITRITNQQLLELEACAARLHEENQASASICAAEIYEQADDFRVEHVSDTPELTGNPWLDDYLAPASLPDQSVML GMSSGELTDNPLLSYFLPFEAYYDPTDHTQLTTSAPFEAYYAAAEPIDYPTYPDINEVYKQVSAVLEQRKGPDLGYIATT DIDPQQAYYALSATIHLWEPVETCMETLVAEQKLPDWPIKIFAEDDHQTACIGDLHFVYSTVYRLQAVEVPLYLHALKQL PPRLFKRYFFMQRLMNRERNDALLMPFFCWESRMVEKLILLFEQAARDQDWLVWYTW >Mature_296_residues GFDITITRITNQQLLELEACAARLHEENQASASICAAEIYEQADDFRVEHVSDTPELTGNPWLDDYLAPASLPDQSVMLG MSSGELTDNPLLSYFLPFEAYYDPTDHTQLTTSAPFEAYYAAAEPIDYPTYPDINEVYKQVSAVLEQRKGPDLGYIATTD IDPQQAYYALSATIHLWEPVETCMETLVAEQKLPDWPIKIFAEDDHQTACIGDLHFVYSTVYRLQAVEVPLYLHALKQLP PRLFKRYFFMQRLMNRERNDALLMPFFCWESRMVEKLILLFEQAARDQDWLVWYTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34352; Mature: 34221
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFDITITRITNQQLLELEACAARLHEENQASASICAAEIYEQADDFRVEHVSDTPELTG CCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCC NPWLDDYLAPASLPDQSVMLGMSSGELTDNPLLSYFLPFEAYYDPTDHTQLTTSAPFEAY CCCHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHEECHHHCCCCCCCCEEECCCCHHHH YAAAEPIDYPTYPDINEVYKQVSAVLEQRKGPDLGYIATTDIDPQQAYYALSATIHLWEP HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHEEEEHEEEEHHH VETCMETLVAEQKLPDWPIKIFAEDDHQTACIGDLHFVYSTVYRLQAVEVPLYLHALKQL HHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPRLFKRYFFMQRLMNRERNDALLMPFFCWESRMVEKLILLFEQAARDQDWLVWYTW CHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure GFDITITRITNQQLLELEACAARLHEENQASASICAAEIYEQADDFRVEHVSDTPELTG CCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCC NPWLDDYLAPASLPDQSVMLGMSSGELTDNPLLSYFLPFEAYYDPTDHTQLTTSAPFEAY CCCHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHEECHHHCCCCCCCCEEECCCCHHHH YAAAEPIDYPTYPDINEVYKQVSAVLEQRKGPDLGYIATTDIDPQQAYYALSATIHLWEP HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHEEEEHEEEEHHH VETCMETLVAEQKLPDWPIKIFAEDDHQTACIGDLHFVYSTVYRLQAVEVPLYLHALKQL HHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPRLFKRYFFMQRLMNRERNDALLMPFFCWESRMVEKLILLFEQAARDQDWLVWYTW CHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA