| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898694
Identifier: 159898694
GI number: 159898694
Start: 2753856
End: 2754422
Strand: Reverse
Name: 159898694
Synonym: Haur_2173
Alternate gene names: NA
Gene position: 2754422-2753856 (Counterclockwise)
Preceding gene: 159898695
Following gene: 159898693
Centisome position: 43.4
GC content: 42.15
Gene sequence:
>567_bases ATGGGTGTTCGTCAATCGTTCGTTCGCATAACCGCCGAACAACTTGCTGAGCTAGAGCAAATTGCCATCGAGCATAGTAG TTTATCATACGCAGAGATTTCTCCTCAACTGTATCAGGTGCTTGATCGACGTAGCCACTTGCAACAATATACAATGGTGC CATTGGATAAACTTAGTCCTGAGCAGGCTTATTACAAATTCACAATCGAGAAAAGCTATTGGTCGTTACTGGAAGACTTG ATGGTTCAGCTTATTCGCGATCAAGTTGTTGATTGGTGGCCAATTCACGAGGACTATCCAGTTCATATTGGTGATTTATG GCCTTGTTACAGTTATATCTACCTTATTTTCCATCATGAGCTTGCGCCACTGCTGGATTTGCTGCAACACGTTCCCTATG AGCAGCTTAAACAAGCCTTTGATGCTGATTTTGCTGAATTTACCGATATGACGGTTGAGGAAAAACAAGGTGTTTACAAT GTAGTGCTGAGTTGTCTTGATAGTATTCGCATAATGGCGCAACAAGCGCATGCTGCTAACGAGTCAATTATTTGGTATAT TAGCTGA
Upstream 100 bases:
>100_bases TTTGAGCAAGCCGCTCGCGATCAAGATTGGTTGGTGTGGTATACCTGGTAGGTTGTTCGTATGATTTAGGCTGAAACGTT GTAGTTAGAGGAACTAAGGT
Downstream 100 bases:
>100_bases AATTATTTTTTGGAGAGGAACTTGATTATGAGCGAAGCCGCAAACGCCTACTATTTTAGTGAAGGCCAAGTTTGGCGCTA CCATACCCGCCCCAACGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MGVRQSFVRITAEQLAELEQIAIEHSSLSYAEISPQLYQVLDRRSHLQQYTMVPLDKLSPEQAYYKFTIEKSYWSLLEDL MVQLIRDQVVDWWPIHEDYPVHIGDLWPCYSYIYLIFHHELAPLLDLLQHVPYEQLKQAFDADFAEFTDMTVEEKQGVYN VVLSCLDSIRIMAQQAHAANESIIWYIS
Sequences:
>Translated_188_residues MGVRQSFVRITAEQLAELEQIAIEHSSLSYAEISPQLYQVLDRRSHLQQYTMVPLDKLSPEQAYYKFTIEKSYWSLLEDL MVQLIRDQVVDWWPIHEDYPVHIGDLWPCYSYIYLIFHHELAPLLDLLQHVPYEQLKQAFDADFAEFTDMTVEEKQGVYN VVLSCLDSIRIMAQQAHAANESIIWYIS >Mature_187_residues GVRQSFVRITAEQLAELEQIAIEHSSLSYAEISPQLYQVLDRRSHLQQYTMVPLDKLSPEQAYYKFTIEKSYWSLLEDLM VQLIRDQVVDWWPIHEDYPVHIGDLWPCYSYIYLIFHHELAPLLDLLQHVPYEQLKQAFDADFAEFTDMTVEEKQGVYNV VLSCLDSIRIMAQQAHAANESIIWYIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22159; Mature: 22028
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRQSFVRITAEQLAELEQIAIEHSSLSYAEISPQLYQVLDRRSHLQQYTMVPLDKLSP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHCCC EQAYYKFTIEKSYWSLLEDLMVQLIRDQVVDWWPIHEDYPVHIGDLWPCYSYIYLIFHHE CHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LAPLLDLLQHVPYEQLKQAFDADFAEFTDMTVEEKQGVYNVVLSCLDSIRIMAQQAHAAN HHHHHHHHHHCCHHHHHHHHCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC ESIIWYIS CCEEEEEC >Mature Secondary Structure GVRQSFVRITAEQLAELEQIAIEHSSLSYAEISPQLYQVLDRRSHLQQYTMVPLDKLSP CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHCCC EQAYYKFTIEKSYWSLLEDLMVQLIRDQVVDWWPIHEDYPVHIGDLWPCYSYIYLIFHHE CHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LAPLLDLLQHVPYEQLKQAFDADFAEFTDMTVEEKQGVYNVVLSCLDSIRIMAQQAHAAN HHHHHHHHHHCCHHHHHHHHCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC ESIIWYIS CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA