| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898673
Identifier: 159898673
GI number: 159898673
Start: 2710343
End: 2711413
Strand: Reverse
Name: 159898673
Synonym: Haur_2152
Alternate gene names: NA
Gene position: 2711413-2710343 (Counterclockwise)
Preceding gene: 159898674
Following gene: 159898672
Centisome position: 42.72
GC content: 52.38
Gene sequence:
>1071_bases ATGAAGAAACTTTCGCGCCGTACATTTGGCAAACTATCGTTGGGTGTGGCAATGAGCGTGGTGGTGGGTGGTACTGAATT ACGCCTCTTGCGGCCTGCCTATGCCGCTGTTGCAACTCCCGCAATCGATTCAACTACTGCTTGGGGTGCTGCCGCTGCCA AAGAGCCAATCAATGTGCTCAATCAAAAGCCAATCGGGATTGTTGTGCACCACACGACGAATCCTAACACCAACGATTTT ACCCGTAATAAGGCTTGGCAAGTGGCACGGCAAATTCAGCAAAGCCATTTCAATCGCGGCTGGATCGATACAGGCCAACA ATTTACGATCAGCCGTGGTGGCTGGATTATGGAAGGTCGCCATCAAAGCTTGAGCATTTTGCAGGGTGGCACGAAGCATG TTCAAGGCGCACACGTCGATGGCCATAATGAAACCCATATTGGCATTGAATGCGAAGGCTTGTATATGAATGTTACGCCC AGCCTGCCTTTGTGGAATAAACTGGTGGCGTTGATTGCCTATATTTGCCAGCAATATGGCCTAACCGCCAACGCTATTGT CGGCCATCGCGATTTGGATAGCACCAGTTGCCCAGGCGATACGCTCTATAGCTTGCTGCCACAGTTGCGTACCGCTGTTG ATACGACGCTCAGCGGTGGTGCAGTTGGCCGGATGTGGCCAATTTTGCGGCGTAACACCCCCGCGACTGGCCTCGCCAAA ACCATGCAATATCTTTTGCGGGCACGCGGCGCGACGATTACCGCCGATGGAGCCTTTGGCCCAGGCACCGAAACTGCCGT CAAGAGTTTCCAAACTGCCAATGGCTTAACCTCAGATGGAGTTGTTGGGGCCGCAACGTGGGAAAAATTAATTATGACCT TGCGCTCAGGCGATACAGGCGAGGCAGTCAAGGCCTTACAAAATCAACTGACGGTGCAAAGTTACCCAACGACAATTGAT GGCAGCTTTGGCACAGGCGTAAATACCCTTGTTCGCGCCTTCCAAACCAATCGCCAACTGACGGTTGATGGCGTGGTCGG CTTGAACAGCTGGAACAACTTAGCGATGTAG
Upstream 100 bases:
>100_bases CCCACATCCACTGTGCTTGGCCTCGCCCATAATCGCTTTTGTCTACAAGCCTCACGTTTTCCAACGTGGGGCTTGTTTTT TGAACAAAGGAAACCCCGCA
Downstream 100 bases:
>100_bases TGAGGTTGCTTGATGAAAGCTTTAGTTTGGCGAATTGCCAGTTTTACCTTGATTTTTGGAATTACACTTGGTTCAATTGG CTCGGCGCAGGCATTTTCAG
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Secreted Protein; N-Acetylmuramyl-L-Alanine Amidase; N-Acetylmuramoyl-L-Alanine Amidase Family 2 Protein; Amidase; Peptidoglycan Recognition Protein I-Beta; Metalloendopeptidase-Like Membrane Protein; Stage II Sporulation D Domain-Containing Protein; Bifunctional Protein N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall-Associated Hydrolase Invasion-Associated Protein; Penicillin-Resistant DD-Carboxypeptidase; FG-GAP Repeat-Containing Protein; Negative Regulator Of Beta-Lactamase Expression; ErfK/YbiS/YcfS/YnhG Family Protein; Peptidase; Penicillin-Resistant Dd-Carboxypeptidase-Like Protein; LOW QUALITY PROTEIN N-Acetylmuramoyl-L-Alanine Amidase; LGFP Repeat Protein
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKKLSRRTFGKLSLGVAMSVVVGGTELRLLRPAYAAVATPAIDSTTAWGAAAAKEPINVLNQKPIGIVVHHTTNPNTNDF TRNKAWQVARQIQQSHFNRGWIDTGQQFTISRGGWIMEGRHQSLSILQGGTKHVQGAHVDGHNETHIGIECEGLYMNVTP SLPLWNKLVALIAYICQQYGLTANAIVGHRDLDSTSCPGDTLYSLLPQLRTAVDTTLSGGAVGRMWPILRRNTPATGLAK TMQYLLRARGATITADGAFGPGTETAVKSFQTANGLTSDGVVGAATWEKLIMTLRSGDTGEAVKALQNQLTVQSYPTTID GSFGTGVNTLVRAFQTNRQLTVDGVVGLNSWNNLAM
Sequences:
>Translated_356_residues MKKLSRRTFGKLSLGVAMSVVVGGTELRLLRPAYAAVATPAIDSTTAWGAAAAKEPINVLNQKPIGIVVHHTTNPNTNDF TRNKAWQVARQIQQSHFNRGWIDTGQQFTISRGGWIMEGRHQSLSILQGGTKHVQGAHVDGHNETHIGIECEGLYMNVTP SLPLWNKLVALIAYICQQYGLTANAIVGHRDLDSTSCPGDTLYSLLPQLRTAVDTTLSGGAVGRMWPILRRNTPATGLAK TMQYLLRARGATITADGAFGPGTETAVKSFQTANGLTSDGVVGAATWEKLIMTLRSGDTGEAVKALQNQLTVQSYPTTID GSFGTGVNTLVRAFQTNRQLTVDGVVGLNSWNNLAM >Mature_356_residues MKKLSRRTFGKLSLGVAMSVVVGGTELRLLRPAYAAVATPAIDSTTAWGAAAAKEPINVLNQKPIGIVVHHTTNPNTNDF TRNKAWQVARQIQQSHFNRGWIDTGQQFTISRGGWIMEGRHQSLSILQGGTKHVQGAHVDGHNETHIGIECEGLYMNVTP SLPLWNKLVALIAYICQQYGLTANAIVGHRDLDSTSCPGDTLYSLLPQLRTAVDTTLSGGAVGRMWPILRRNTPATGLAK TMQYLLRARGATITADGAFGPGTETAVKSFQTANGLTSDGVVGAATWEKLIMTLRSGDTGEAVKALQNQLTVQSYPTTID GSFGTGVNTLVRAFQTNRQLTVDGVVGLNSWNNLAM
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI156616294, Length=178, Percent_Identity=33.7078651685393, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI21356683, Length=165, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38222; Mature: 38222
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSRRTFGKLSLGVAMSVVVGGTELRLLRPAYAAVATPAIDSTTAWGAAAAKEPINVL CCCCHHHHHHHHHHHHHHHEEECCCEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHH NQKPIGIVVHHTTNPNTNDFTRNKAWQVARQIQQSHFNRGWIDTGQQFTISRGGWIMEGR CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECCC HQSLSILQGGTKHVQGAHVDGHNETHIGIECEGLYMNVTPSLPLWNKLVALIAYICQQYG CCHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC LTANAIVGHRDLDSTSCPGDTLYSLLPQLRTAVDTTLSGGAVGRMWPILRRNTPATGLAK CCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHH TMQYLLRARGATITADGAFGPGTETAVKSFQTANGLTSDGVVGAATWEKLIMTLRSGDTG HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCH EAVKALQNQLTVQSYPTTIDGSFGTGVNTLVRAFQTNRQLTVDGVVGLNSWNNLAM HHHHHHHHHCCCEECCCEECCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure MKKLSRRTFGKLSLGVAMSVVVGGTELRLLRPAYAAVATPAIDSTTAWGAAAAKEPINVL CCCCHHHHHHHHHHHHHHHEEECCCEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHH NQKPIGIVVHHTTNPNTNDFTRNKAWQVARQIQQSHFNRGWIDTGQQFTISRGGWIMEGR CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECCC HQSLSILQGGTKHVQGAHVDGHNETHIGIECEGLYMNVTPSLPLWNKLVALIAYICQQYG CCHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC LTANAIVGHRDLDSTSCPGDTLYSLLPQLRTAVDTTLSGGAVGRMWPILRRNTPATGLAK CCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHH TMQYLLRARGATITADGAFGPGTETAVKSFQTANGLTSDGVVGAATWEKLIMTLRSGDTG HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCH EAVKALQNQLTVQSYPTTIDGSFGTGVNTLVRAFQTNRQLTVDGVVGLNSWNNLAM HHHHHHHHHCCCEECCCEECCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA