| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898648
Identifier: 159898648
GI number: 159898648
Start: 2671210
End: 2672028
Strand: Direct
Name: 159898648
Synonym: Haur_2127
Alternate gene names: NA
Gene position: 2671210-2672028 (Clockwise)
Preceding gene: 159898646
Following gene: 159898649
Centisome position: 42.09
GC content: 52.14
Gene sequence:
>819_bases ATGCTCATAGCCGATGATGCGATTTGGGATTTAACCAATGATATTATGTTTTGGCAAGATACCCAACGGATGATCTTCGT GAAGGATACAGCCTTTGATCCTCGGCAACTGCTGGTGCTACGGGGTGTGGCAGTTGAACGCCGACCACACTATAAGCAAG TGCTTGAAGCCTACCAACTCAGCACCAATGAAGAAATTCGGCTTGAAATCGGCGATCTGCGCAACGTTAATGATCATGTT GTCTGCTGGAATGTTGCGCGAGGAGCCAGCTTTTGTGTCCGCCCACAGGTTTCGCGAGCTGCCGCCAAGCACGATTCAAG CACAATCGAGCTGTGGCATTACGCTTCGGTGAGTGCCAGTTTTCACCGAAGCGTCGCCAAAACCCTTGAGCGCGGGCTGA TTCAACAGGCATGGTGGCAAGCTGCTGGCAGTCTGTTAGCAGTTGCATGGTATCGCGACGTTGAGTTAGCCCCAAGCCAA AGCCATGCCTACGGACTCGTGAAATTCGATGGAACAACGCTTGAAGTGTTGCGCGAACAACGTTGGGTTGGGCCAGAAGT CACTGGCACAGAACTGCGCTTCAAATCGGCTAGCTTGTCGGCCAATAACGACCTACTTTGGCATGCCAATCGGCTCAGTT TAATCGATGGCACAACATGGGAAGTGCGCGAGATCTTGCCTTACAAACCTGGATTCACTGAAACAAGCAACATTAATCCT GATGGCAGCAGCTATGCCATCGGGCGATCCAACGATGCGGTTGTGGTTGATCGTGCGAGCAATCGTGCATGGTCGTTGCG GCGCGAGCGTGAAGTGTGA
Upstream 100 bases:
>100_bases GCAAATTCATATTTTTCAACGCCAAGACCAGCAATGGCGATTGATCCTCACATCGCCAAAACACGAGAGCTATACGCTGA TCGGCTGGTTGGGCGAGGAA
Downstream 100 bases:
>100_bases TTGAATAGTCGGGGCTAAGCCGTTGAGGAAACAGTATGACCAGCTTTAACCTTAGCTGCCCTGAATGTGGAGCCTATTTC GCGGCCAATTTTCCAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLIADDAIWDLTNDIMFWQDTQRMIFVKDTAFDPRQLLVLRGVAVERRPHYKQVLEAYQLSTNEEIRLEIGDLRNVNDHV VCWNVARGASFCVRPQVSRAAAKHDSSTIELWHYASVSASFHRSVAKTLERGLIQQAWWQAAGSLLAVAWYRDVELAPSQ SHAYGLVKFDGTTLEVLREQRWVGPEVTGTELRFKSASLSANNDLLWHANRLSLIDGTTWEVREILPYKPGFTETSNINP DGSSYAIGRSNDAVVVDRASNRAWSLRREREV
Sequences:
>Translated_272_residues MLIADDAIWDLTNDIMFWQDTQRMIFVKDTAFDPRQLLVLRGVAVERRPHYKQVLEAYQLSTNEEIRLEIGDLRNVNDHV VCWNVARGASFCVRPQVSRAAAKHDSSTIELWHYASVSASFHRSVAKTLERGLIQQAWWQAAGSLLAVAWYRDVELAPSQ SHAYGLVKFDGTTLEVLREQRWVGPEVTGTELRFKSASLSANNDLLWHANRLSLIDGTTWEVREILPYKPGFTETSNINP DGSSYAIGRSNDAVVVDRASNRAWSLRREREV >Mature_272_residues MLIADDAIWDLTNDIMFWQDTQRMIFVKDTAFDPRQLLVLRGVAVERRPHYKQVLEAYQLSTNEEIRLEIGDLRNVNDHV VCWNVARGASFCVRPQVSRAAAKHDSSTIELWHYASVSASFHRSVAKTLERGLIQQAWWQAAGSLLAVAWYRDVELAPSQ SHAYGLVKFDGTTLEVLREQRWVGPEVTGTELRFKSASLSANNDLLWHANRLSLIDGTTWEVREILPYKPGFTETSNINP DGSSYAIGRSNDAVVVDRASNRAWSLRREREV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30970; Mature: 30970
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIADDAIWDLTNDIMFWQDTQRMIFVKDTAFDPRQLLVLRGVAVERRPHYKQVLEAYQL CEECCCHHHHHHCCEEEEECCCEEEEEECCCCCHHHEEEEECCCCCCCCCHHHHHHHHHC STNEEIRLEIGDLRNVNDHVVCWNVARGASFCVRPQVSRAAAKHDSSTIELWHYASVSAS CCCCEEEEEECCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHCCCCEEEEEEEECCCHH FHRSVAKTLERGLIQQAWWQAAGSLLAVAWYRDVELAPSQSHAYGLVKFDGTTLEVLREQ HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECEECCCCCCCEEEEEEECCCHHHHHHHH RWVGPEVTGTELRFKSASLSANNDLLWHANRLSLIDGTTWEVREILPYKPGFTETSNINP HCCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCCHHHHHHCCCCCCCCCCCCCCC DGSSYAIGRSNDAVVVDRASNRAWSLRREREV CCCEEEECCCCCEEEEECCCCCEECCHHHCCC >Mature Secondary Structure MLIADDAIWDLTNDIMFWQDTQRMIFVKDTAFDPRQLLVLRGVAVERRPHYKQVLEAYQL CEECCCHHHHHHCCEEEEECCCEEEEEECCCCCHHHEEEEECCCCCCCCCHHHHHHHHHC STNEEIRLEIGDLRNVNDHVVCWNVARGASFCVRPQVSRAAAKHDSSTIELWHYASVSAS CCCCEEEEEECCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHCCCCEEEEEEEECCCHH FHRSVAKTLERGLIQQAWWQAAGSLLAVAWYRDVELAPSQSHAYGLVKFDGTTLEVLREQ HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECEECCCCCCCEEEEEEECCCHHHHHHHH RWVGPEVTGTELRFKSASLSANNDLLWHANRLSLIDGTTWEVREILPYKPGFTETSNINP HCCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCCHHHHHHCCCCCCCCCCCCCCC DGSSYAIGRSNDAVVVDRASNRAWSLRREREV CCCEEEECCCCCEEEEECCCCCEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA