| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898637
Identifier: 159898637
GI number: 159898637
Start: 2658175
End: 2658852
Strand: Direct
Name: 159898637
Synonym: Haur_2116
Alternate gene names: NA
Gene position: 2658175-2658852 (Clockwise)
Preceding gene: 159898636
Following gene: 159898645
Centisome position: 41.88
GC content: 48.08
Gene sequence:
>678_bases ATGCTACCTATTCAATGGCCGAGCACGCGACGATGGGGCATAGTTTTGGGAGTTTTGCTAGCGTTTTGGCCAAGTTTCGC CTTGGCTTGTACCCAACCGATTGGTGGGCATCCCCGTTATACTGCGACTGAGCATACCAATGCCGCCGCCATCGTTTTAG AAGGTGTCGTGATTGATGGAAAAGTCAACAATAATCCTGGCTCGCTCATTAACCTGGCAACTATCCAAGTATCTCAATAC TTTAAAGGAATTGGACCTGAAATCGTTACCGTTGAAGGGTTTGGTTCAATCACAATGTGCCTTAGCCAAGTTGAAATCGG TGATCATTTGATCTTCTATATCTATGTTGGAGCAAACAGTCAGTGGCATGCCCATTATATGAGTGCTGGCGATGCTGTAG CAAGGCCAATACCTTCAATTAGGGCCGAAATTATCGCCGCAGTGGGCAGCCCACCAGTCGCACCATTGCCCTCAACGCCT GGACCGCTTGATCCAACCTCAATTCCAATCACGACCCCTGCTGATCCATCAACAATTGTAGTGCCAACACCACAATTGCC CATTGAACTTCCAGCGACCAGCCAAGCAGGTTTACCATTAATCTGGTGGGTTTTGCTAGGCCTCAGTTGCTTAGCCGGTG GCATTTGGTTGCGTCAACACTATCTTAAATCAAGCTAA
Upstream 100 bases:
>100_bases TTTACATCCATTTCGATCGATTAGAATCAATAGGTGTGTAGATAGGTGCAACGCTTGCACTGGCAATTGTAAGCGTTGCT AGCACTGTGAGGTTTGGCAT
Downstream 100 bases:
>100_bases ACTCATCGCCAGCCCAACGCTGAATAGCAACGTTGGGCTGGCGGCGGTTCGCACCAAATTAATCGCGTATGGTTGAGATT ACAGCTCTTTTTTACGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDGKVNNNPGSLINLATIQVSQY FKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANSQWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTP GPLDPTSIPITTPADPSTIVVPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS
Sequences:
>Translated_225_residues MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDGKVNNNPGSLINLATIQVSQY FKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANSQWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTP GPLDPTSIPITTPADPSTIVVPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS >Mature_225_residues MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDGKVNNNPGSLINLATIQVSQY FKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANSQWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTP GPLDPTSIPITTPADPSTIVVPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23940; Mature: 23940
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEEEEEEC KVNNNPGSLINLATIQVSQYFKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANS EECCCCCCEEEEEEEEHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCC QWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTPGPLDPTSIPITTPADPSTIV CEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE VPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEEEEEEC KVNNNPGSLINLATIQVSQYFKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANS EECCCCCCEEEEEEEEHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCC QWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTPGPLDPTSIPITTPADPSTIV CEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE VPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA