| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898600
Identifier: 159898600
GI number: 159898600
Start: 2588427
End: 2590640
Strand: Reverse
Name: 159898600
Synonym: Haur_2079
Alternate gene names: NA
Gene position: 2590640-2588427 (Counterclockwise)
Preceding gene: 159898601
Following gene: 159898596
Centisome position: 40.82
GC content: 49.19
Gene sequence:
>2214_bases GTGGTGGCGCAGCTGATTCTCAAGCATCATCTCACCGTGTCCTATTTTCCCGAAGAAAGCTATCCGGCGATGAAGGGGGA ATTTGCGCGGATTCTTGATGAACTCTCGAAACAGGGGATTCACGAGACCATCTATCTGGATGGCCTCGATCAACTCCAGC CAGAAATTGACGGCTCGCGGGATTTATCATTCTTGCCACCACAGCCGCCCCAAGGCATGGTGATCGTGCTTGGCTCACGG CCTGATGAGACCTTGAAACCGCTGGAGATTCTGCATCGGGTCGATTACGATCTGCCACCACTGAGTGAAACCGATGCACT GTCGCTCTGGCGATCGGTCCAGCCTGGCATGGCAGATGGCCTATTCCATGACCTGTATACGGCGCTGAAGGGCAATGCAT TATTTGTCCATTTAGCGGCGGATACGATGCAGGATGCGTCGGTGGTCGATGCGACCAGTCTCATCAAACAGATTGAGCAG AATCCACAAAATTTGTTTGGGATTACGCTGGAACGGATTAAACGCGTGCCCCTCTCCAAGTGGGATACGGTGTGGAAGCC CATGCTGGCGCTCTTGCTCGTCGCCCAAGAACCATTGCGACTGGATGTGTTGGGCGATCTGCTGGGACATGACCACGACA CCATGCAGGATGCAGTGTTGGTTTTAGGTGGGTTGGTCAGCCAAGGTATTGATCACCAGGTTGCCTTACATCACCTGCTG TTTCGTGACTATTTGGCGGCATCGGTGTTCAATGATCGTGACGTCAAACGCTGGCATCAAGAGTTGTCCAACTGGTGTGC GAAGGATGTGGATGCGATTTGGTCCGATGATCGCGATCCCATTGAGCAGGCACGGCGGGTCTATGCGCGACATCATTACA TCACCCATCTCTCAGGGGCAGAGAACTGGCCTACACTCTGGCAGGTCTTGGATGCGGGCGATTATGGGGAACAGAAAACC CGATTTGATCCGAGTACCCGGCTCTATGCCTTGGATTTGGATCGCGGGCGAGAGAGTGTGATTAAGGCAGGTCAATCAAC CGAGGAACATATCCAAAATTTGCCCCGCCTGTGGAAGTATAGTTTGCTGCGGACGAGCTTAACCAGCCGTGTTGATCAGT GGCCAGATAATGCGTTTGAGGTTTTGGTGATCCTTGGGCGTACACAAGAAGCTCTAGAGCGTATTCAATTGCTTTCTGAT CCAGAACAGCAGATCACTCTTTGGTGTAAAATGTTGGCTCAGTGTGATACAAAAAACTATAACATAATATTAAACCGAAT ACAACAATCAGTCAGCCAACTTTCACGTCATCATACTGATACCCTCGCAACAATTGCCGAAACTACCGCTACCAGTGGGA ATATCGACCGTGCACTCTCCATTACTGCCGCCATTGAAAATAATGATCGCACAGGAATCCTTAAAAAAATTGCCAGAACC GCCGCTACTAGTGGAGATATCGACCGTGCACTCTCCATTGCTGCCACCATTGAAAATGATAATTCCCGTAGCTATGCTCT CACAGCAATTGCCGAAGCCATCGCCACCAGTGGGAATATCGACCGTGCACTCTCCATCGCTGCCACCATTGAAAATGATA ATTCCCGTAGCTATGCTCTCAAAAAAATTGCCGAAACTATCGCTACCAGCGGGGATATCGACCGTGCACTCTCCATTGCT GCCACCATTGAAAATGATAATTCCCGTAGCTATGCTCTCACAGCAATTGCCGAAGCCATCGCCACCAGTGGGAATATCGA CCGTGCACTCTCCATCGCTGCCACCATTGAAAATGATAATTCCCGTAGCTATGCTCTCAAAAAAATTGCCGAAGCCATCG CTACCAGTGGGGATATCGACCGTGCGCTCTCCATTGCTGCCACTATTGAAAATAATGATCGCACAGGAATCCTCGCAACA ATTGCCGAAACCGCCGTTGCCAGTGGAGATATCGACCGTGCACTCTCCATTGCCGCCACGATCCCTGATGATCGAATGCG AATCAATACTTTTATAACTATGGCCCCAGTGATTCAGTCAGCTGAAAAAATTCTCTCGATTATCCATAAGGAATGGTTTC AGAGTAAAACTCATGATATGACTTTGTATTCATTTTGTCTTATAAATCTCTTATCAGAAAATAATCTTTGGCTAATTACA ACAATTATAAAAAGTCAGGGGTGGGTCAATGACCAGTTGAAACGGCTGGGGTAG
Upstream 100 bases:
>100_bases AGAGCAGCAGCATCGCCAAGCTGATTCAGCAGGCGGGCATTGCACAAACCCCGCACCACTTTATTGCGCTCACGACAGAT CGCGCGTATCAATTAGGCTA
Downstream 100 bases:
>100_bases AAAGAAGACAGAATCCTGTTTATGAGGATGGTGTTCTTAATCAAGGGCTAACTTACTAAATAAGTCGGCCCCTGATGCCC CACCACGACCCCCGCTTTTT
Product: peptidase C14, caspase catalytic subunit P20
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSRDLSFLPPQPPQGMVIVLGSR PDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADGLFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQ NPQNLFGITLERIKRVPLSKWDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGAENWPTLWQVLDAGDYGEQKT RFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKYSLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSD PEQQITLWCKMLAQCDTKNYNIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAETIATSGDIDRALSIA ATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILAT IAETAVASGDIDRALSIAATIPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT TIIKSQGWVNDQLKRLG
Sequences:
>Translated_737_residues MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSRDLSFLPPQPPQGMVIVLGSR PDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADGLFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQ NPQNLFGITLERIKRVPLSKWDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGAENWPTLWQVLDAGDYGEQKT RFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKYSLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSD PEQQITLWCKMLAQCDTKNYNIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAETIATSGDIDRALSIA ATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILAT IAETAVASGDIDRALSIAATIPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT TIIKSQGWVNDQLKRLG >Mature_737_residues MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSRDLSFLPPQPPQGMVIVLGSR PDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADGLFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQ NPQNLFGITLERIKRVPLSKWDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGAENWPTLWQVLDAGDYGEQKT RFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKYSLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSD PEQQITLWCKMLAQCDTKNYNIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAETIATSGDIDRALSIA ATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILAT IAETAVASGDIDRALSIAATIPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT TIIKSQGWVNDQLKRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011990 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81942; Mature: 81942
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSR CHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCC DLSFLPPQPPQGMVIVLGSRPDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADG CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHH LFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQNPQNLFGITLERIKRVPLSK HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH WDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCC ENWPTLWQVLDAGDYGEQKTRFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKY CCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHH SLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSDPEQQITLWCKMLAQCDTKNY HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH NIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYAL HCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCHHHHH KKIAETIATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDN HHHHHHHHCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCC SRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILATIAETAVASGDIDRALSIAAT CHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHEEEEE IPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE TIIKSQGWVNDQLKRLG EEECCCCCCHHHHHHCC >Mature Secondary Structure MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSR CHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCC DLSFLPPQPPQGMVIVLGSRPDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADG CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHH LFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQNPQNLFGITLERIKRVPLSK HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH WDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCC ENWPTLWQVLDAGDYGEQKTRFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKY CCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHH SLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSDPEQQITLWCKMLAQCDTKNY HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH NIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYAL HCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCHHHHH KKIAETIATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDN HHHHHHHHCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCC SRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILATIAETAVASGDIDRALSIAAT CHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHEEEEE IPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE TIIKSQGWVNDQLKRLG EEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]