The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898600

Identifier: 159898600

GI number: 159898600

Start: 2588427

End: 2590640

Strand: Reverse

Name: 159898600

Synonym: Haur_2079

Alternate gene names: NA

Gene position: 2590640-2588427 (Counterclockwise)

Preceding gene: 159898601

Following gene: 159898596

Centisome position: 40.82

GC content: 49.19

Gene sequence:

>2214_bases
GTGGTGGCGCAGCTGATTCTCAAGCATCATCTCACCGTGTCCTATTTTCCCGAAGAAAGCTATCCGGCGATGAAGGGGGA
ATTTGCGCGGATTCTTGATGAACTCTCGAAACAGGGGATTCACGAGACCATCTATCTGGATGGCCTCGATCAACTCCAGC
CAGAAATTGACGGCTCGCGGGATTTATCATTCTTGCCACCACAGCCGCCCCAAGGCATGGTGATCGTGCTTGGCTCACGG
CCTGATGAGACCTTGAAACCGCTGGAGATTCTGCATCGGGTCGATTACGATCTGCCACCACTGAGTGAAACCGATGCACT
GTCGCTCTGGCGATCGGTCCAGCCTGGCATGGCAGATGGCCTATTCCATGACCTGTATACGGCGCTGAAGGGCAATGCAT
TATTTGTCCATTTAGCGGCGGATACGATGCAGGATGCGTCGGTGGTCGATGCGACCAGTCTCATCAAACAGATTGAGCAG
AATCCACAAAATTTGTTTGGGATTACGCTGGAACGGATTAAACGCGTGCCCCTCTCCAAGTGGGATACGGTGTGGAAGCC
CATGCTGGCGCTCTTGCTCGTCGCCCAAGAACCATTGCGACTGGATGTGTTGGGCGATCTGCTGGGACATGACCACGACA
CCATGCAGGATGCAGTGTTGGTTTTAGGTGGGTTGGTCAGCCAAGGTATTGATCACCAGGTTGCCTTACATCACCTGCTG
TTTCGTGACTATTTGGCGGCATCGGTGTTCAATGATCGTGACGTCAAACGCTGGCATCAAGAGTTGTCCAACTGGTGTGC
GAAGGATGTGGATGCGATTTGGTCCGATGATCGCGATCCCATTGAGCAGGCACGGCGGGTCTATGCGCGACATCATTACA
TCACCCATCTCTCAGGGGCAGAGAACTGGCCTACACTCTGGCAGGTCTTGGATGCGGGCGATTATGGGGAACAGAAAACC
CGATTTGATCCGAGTACCCGGCTCTATGCCTTGGATTTGGATCGCGGGCGAGAGAGTGTGATTAAGGCAGGTCAATCAAC
CGAGGAACATATCCAAAATTTGCCCCGCCTGTGGAAGTATAGTTTGCTGCGGACGAGCTTAACCAGCCGTGTTGATCAGT
GGCCAGATAATGCGTTTGAGGTTTTGGTGATCCTTGGGCGTACACAAGAAGCTCTAGAGCGTATTCAATTGCTTTCTGAT
CCAGAACAGCAGATCACTCTTTGGTGTAAAATGTTGGCTCAGTGTGATACAAAAAACTATAACATAATATTAAACCGAAT
ACAACAATCAGTCAGCCAACTTTCACGTCATCATACTGATACCCTCGCAACAATTGCCGAAACTACCGCTACCAGTGGGA
ATATCGACCGTGCACTCTCCATTACTGCCGCCATTGAAAATAATGATCGCACAGGAATCCTTAAAAAAATTGCCAGAACC
GCCGCTACTAGTGGAGATATCGACCGTGCACTCTCCATTGCTGCCACCATTGAAAATGATAATTCCCGTAGCTATGCTCT
CACAGCAATTGCCGAAGCCATCGCCACCAGTGGGAATATCGACCGTGCACTCTCCATCGCTGCCACCATTGAAAATGATA
ATTCCCGTAGCTATGCTCTCAAAAAAATTGCCGAAACTATCGCTACCAGCGGGGATATCGACCGTGCACTCTCCATTGCT
GCCACCATTGAAAATGATAATTCCCGTAGCTATGCTCTCACAGCAATTGCCGAAGCCATCGCCACCAGTGGGAATATCGA
CCGTGCACTCTCCATCGCTGCCACCATTGAAAATGATAATTCCCGTAGCTATGCTCTCAAAAAAATTGCCGAAGCCATCG
CTACCAGTGGGGATATCGACCGTGCGCTCTCCATTGCTGCCACTATTGAAAATAATGATCGCACAGGAATCCTCGCAACA
ATTGCCGAAACCGCCGTTGCCAGTGGAGATATCGACCGTGCACTCTCCATTGCCGCCACGATCCCTGATGATCGAATGCG
AATCAATACTTTTATAACTATGGCCCCAGTGATTCAGTCAGCTGAAAAAATTCTCTCGATTATCCATAAGGAATGGTTTC
AGAGTAAAACTCATGATATGACTTTGTATTCATTTTGTCTTATAAATCTCTTATCAGAAAATAATCTTTGGCTAATTACA
ACAATTATAAAAAGTCAGGGGTGGGTCAATGACCAGTTGAAACGGCTGGGGTAG

Upstream 100 bases:

>100_bases
AGAGCAGCAGCATCGCCAAGCTGATTCAGCAGGCGGGCATTGCACAAACCCCGCACCACTTTATTGCGCTCACGACAGAT
CGCGCGTATCAATTAGGCTA

Downstream 100 bases:

>100_bases
AAAGAAGACAGAATCCTGTTTATGAGGATGGTGTTCTTAATCAAGGGCTAACTTACTAAATAAGTCGGCCCCTGATGCCC
CACCACGACCCCCGCTTTTT

Product: peptidase C14, caspase catalytic subunit P20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 737; Mature: 737

Protein sequence:

>737_residues
MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSRDLSFLPPQPPQGMVIVLGSR
PDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADGLFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQ
NPQNLFGITLERIKRVPLSKWDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL
FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGAENWPTLWQVLDAGDYGEQKT
RFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKYSLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSD
PEQQITLWCKMLAQCDTKNYNIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART
AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAETIATSGDIDRALSIA
ATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILAT
IAETAVASGDIDRALSIAATIPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT
TIIKSQGWVNDQLKRLG

Sequences:

>Translated_737_residues
MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSRDLSFLPPQPPQGMVIVLGSR
PDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADGLFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQ
NPQNLFGITLERIKRVPLSKWDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL
FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGAENWPTLWQVLDAGDYGEQKT
RFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKYSLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSD
PEQQITLWCKMLAQCDTKNYNIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART
AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAETIATSGDIDRALSIA
ATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILAT
IAETAVASGDIDRALSIAATIPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT
TIIKSQGWVNDQLKRLG
>Mature_737_residues
MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSRDLSFLPPQPPQGMVIVLGSR
PDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADGLFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQ
NPQNLFGITLERIKRVPLSKWDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL
FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGAENWPTLWQVLDAGDYGEQKT
RFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKYSLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSD
PEQQITLWCKMLAQCDTKNYNIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART
AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAETIATSGDIDRALSIA
ATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILAT
IAETAVASGDIDRALSIAATIPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT
TIIKSQGWVNDQLKRLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81942; Mature: 81942

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSR
CHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCC
DLSFLPPQPPQGMVIVLGSRPDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADG
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHH
LFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQNPQNLFGITLERIKRVPLSK
HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
WDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCC
ENWPTLWQVLDAGDYGEQKTRFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKY
CCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHH
SLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSDPEQQITLWCKMLAQCDTKNY
HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
NIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH
AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYAL
HCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCHHHHH
KKIAETIATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDN
HHHHHHHHCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCC
SRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILATIAETAVASGDIDRALSIAAT
CHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHEEEEE
IPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE
TIIKSQGWVNDQLKRLG
EEECCCCCCHHHHHHCC
>Mature Secondary Structure
MVAQLILKHHLTVSYFPEESYPAMKGEFARILDELSKQGIHETIYLDGLDQLQPEIDGSR
CHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCC
DLSFLPPQPPQGMVIVLGSRPDETLKPLEILHRVDYDLPPLSETDALSLWRSVQPGMADG
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHH
LFHDLYTALKGNALFVHLAADTMQDASVVDATSLIKQIEQNPQNLFGITLERIKRVPLSK
HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
WDTVWKPMLALLLVAQEPLRLDVLGDLLGHDHDTMQDAVLVLGGLVSQGIDHQVALHHLL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FRDYLAASVFNDRDVKRWHQELSNWCAKDVDAIWSDDRDPIEQARRVYARHHYITHLSGA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCC
ENWPTLWQVLDAGDYGEQKTRFDPSTRLYALDLDRGRESVIKAGQSTEEHIQNLPRLWKY
CCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHH
SLLRTSLTSRVDQWPDNAFEVLVILGRTQEALERIQLLSDPEQQITLWCKMLAQCDTKNY
HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
NIILNRIQQSVSQLSRHHTDTLATIAETTATSGNIDRALSITAAIENNDRTGILKKIART
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH
AATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDNSRSYAL
HCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCHHHHH
KKIAETIATSGDIDRALSIAATIENDNSRSYALTAIAEAIATSGNIDRALSIAATIENDN
HHHHHHHHCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCC
SRSYALKKIAEAIATSGDIDRALSIAATIENNDRTGILATIAETAVASGDIDRALSIAAT
CHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHEEEEE
IPDDRMRINTFITMAPVIQSAEKILSIIHKEWFQSKTHDMTLYSFCLINLLSENNLWLIT
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE
TIIKSQGWVNDQLKRLG
EEECCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]