| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898596
Identifier: 159898596
GI number: 159898596
Start: 2583253
End: 2583600
Strand: Reverse
Name: 159898596
Synonym: Haur_2075
Alternate gene names: NA
Gene position: 2583600-2583253 (Counterclockwise)
Preceding gene: 159898600
Following gene: 159898595
Centisome position: 40.71
GC content: 49.71
Gene sequence:
>348_bases ATGATACTCAACGCAACAACCCAATCGTTCAATTGCGATAGCTGGGAGGGAGCGATTTGTCTTTCTGTCCTCATAATGAT ATATTGTATCAATAAAGTGTCCAGTATAAGGTTTCCTATGCCCCTCTATGTCTATAGCTGTCCGCAATGCGCGATCGAAA TTGAGGAATTACGCCCACAGCGTGAGGCCGATATGCCGTTCGTTTGCCCGGTCTGTCATGAGTTTGGTGTGCGCGACATC ACGTCCTTCCATCTCTGGCGCAATCAACCGTCACCAGAACTCCGCACACCATCCACGGGAGACAAGGATCATCACCCATC ATGTGCGTGTTGTCGGCCTTATCCGTAG
Upstream 100 bases:
>100_bases GCAGCCCGCATCGGAGATACCTATCAATACTGCAGTATCCTTGCTTCATGCTAGTCTGGAAACTCTCGAAGAATGGTGGC GTTGCTTCACGGGTGTTCGC
Downstream 100 bases:
>100_bases CGAGGAGCAGTATGACGCGCTGTTTTGAAGGAGTTTCTATGAGCGAAGCACCAGCCATTCCGATGACGATTTTGACTGGC TTTTTAGGTGCAGGGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MILNATTQSFNCDSWEGAICLSVLIMIYCINKVSSIRFPMPLYVYSCPQCAIEIEELRPQREADMPFVCPVCHEFGVRDI TSFHLWRNQPSPELRTPSTGDKDHHPSCACCRPYP
Sequences:
>Translated_115_residues MILNATTQSFNCDSWEGAICLSVLIMIYCINKVSSIRFPMPLYVYSCPQCAIEIEELRPQREADMPFVCPVCHEFGVRDI TSFHLWRNQPSPELRTPSTGDKDHHPSCACCRPYP >Mature_115_residues MILNATTQSFNCDSWEGAICLSVLIMIYCINKVSSIRFPMPLYVYSCPQCAIEIEELRPQREADMPFVCPVCHEFGVRDI TSFHLWRNQPSPELRTPSTGDKDHHPSCACCRPYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13155; Mature: 13155
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 8.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNATTQSFNCDSWEGAICLSVLIMIYCINKVSSIRFPMPLYVYSCPQCAIEIEELRPQ CEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHCCCC READMPFVCPVCHEFGVRDITSFHLWRNQPSPELRTPSTGDKDHHPSCACCRPYP CCCCCCEECHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MILNATTQSFNCDSWEGAICLSVLIMIYCINKVSSIRFPMPLYVYSCPQCAIEIEELRPQ CEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHCCCC READMPFVCPVCHEFGVRDITSFHLWRNQPSPELRTPSTGDKDHHPSCACCRPYP CCCCCCEECHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA