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The map label for this gene is nisX1 [H]

Identifier: 159898590

GI number: 159898590

Start: 2579033

End: 2580037

Strand: Direct

Name: nisX1 [H]

Synonym: Haur_2069

Alternate gene names: 159898590

Gene position: 2579033-2580037 (Clockwise)

Preceding gene: 159898589

Following gene: 159898591

Centisome position: 40.64

GC content: 62.59

Gene sequence:

>1005_bases
GTGGCTGATCTAGCTCCCACGGTGGGCATTGCCGCTGCCTGTCGGGTACTCGGTGTCCCGCGCAGCGCCGTCTATCGTGC
GGCCCCGCCTGCTCCCGCAGCGGTTCCGCGTCGTCGGCCTGCCCGTGCGCTCACGCCCAATGAGGTCGCCCACATTCGCA
CGGTGCTCAACAGTGACCGCTTTGCCGACTGCACGCCGCGCCAGATCTACGCCACCTTGCTTGATGAGGGAACCTACCTG
TGCCATTGGCGCACGATGTACCGGATCTTGGCCGCCCATCGCGAAGTCCGGGAACGCCGCAACCAGCTGCGGCATCCGAC
CTATGCTGCGCCGGAATTGTTGGCCACGGGGCCAAACCAGCTCTGGAGTTGGGATATCACGAAGTTCAAAGGGCCAACCA
CGTGGTCGTATTTCTATGCGTATGTGATTTTGGATGTGTTCAGCCGCTGCATTGTGGGCTGGATGGTGATGGAGCGCGAA
TCGGCGGCGTTGGCCGAACAGTGTATCGCCGAAACCTATCACCGCGAGGGCATTCAGCCGAACCAACGCACCCTGCACGC
CGACAATGGCAGTGCCATGACCGCCAAGCCGGTGGCCCAATTGCTCGCCGATTTAGGCGTGACCAAAACCCATAGTCGTC
CGCATGTCTCGAACGACAATCCGTACTCGGAAGCCCAGTTCAAGACGACCAAATATCGGCCTGATTTTCCCGATCGGTTT
GGCAGTCTTATCGATGCGCGGGCGTGGATGCGGGCGTTTGTGCAGTGGTACAACCACGACCATTGCCACAGTGGGATTGG
CTTGCTGCCGCCAGCGGTGGTGCATCATGGGCAGGCCAGCGCCATGACAACGGCGCGGCAGCAGGTGCTGGCGACGGCCT
ATGCGGCCCACCCCGAACGCTTTGTGCGGGGAACACCACGCCCACCGCGTGTGCCGCAGGCCGTGTGGATTAACCGCCCA
GCTGGGCCAGCTGATCCGTCGATCACAGCGGCGTTGCGCGAATAG

Upstream 100 bases:

>100_bases
CCCAAGCCGAGGTGATCATCGATGTGCAAAAAAAGCTTGCAACCCTGTTGGGGATCACGCTCCCAGCGCCGCCGACCGAC
GCGCAGGATTAATCATCGCC

Downstream 100 bases:

>100_bases
CCACCTTCTTTAATAGTCCGTTTACTCCGTTGTCATCTGTTTCACCGTGCTTGACACATTCCGTCGCGGCTTTGCACCCG
TCTGGACAGCGGTGTACCAA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MADLAPTVGIAAACRVLGVPRSAVYRAAPPAPAAVPRRRPARALTPNEVAHIRTVLNSDRFADCTPRQIYATLLDEGTYL
CHWRTMYRILAAHREVRERRNQLRHPTYAAPELLATGPNQLWSWDITKFKGPTTWSYFYAYVILDVFSRCIVGWMVMERE
SAALAEQCIAETYHREGIQPNQRTLHADNGSAMTAKPVAQLLADLGVTKTHSRPHVSNDNPYSEAQFKTTKYRPDFPDRF
GSLIDARAWMRAFVQWYNHDHCHSGIGLLPPAVVHHGQASAMTTARQQVLATAYAAHPERFVRGTPRPPRVPQAVWINRP
AGPADPSITAALRE

Sequences:

>Translated_334_residues
MADLAPTVGIAAACRVLGVPRSAVYRAAPPAPAAVPRRRPARALTPNEVAHIRTVLNSDRFADCTPRQIYATLLDEGTYL
CHWRTMYRILAAHREVRERRNQLRHPTYAAPELLATGPNQLWSWDITKFKGPTTWSYFYAYVILDVFSRCIVGWMVMERE
SAALAEQCIAETYHREGIQPNQRTLHADNGSAMTAKPVAQLLADLGVTKTHSRPHVSNDNPYSEAQFKTTKYRPDFPDRF
GSLIDARAWMRAFVQWYNHDHCHSGIGLLPPAVVHHGQASAMTTARQQVLATAYAAHPERFVRGTPRPPRVPQAVWINRP
AGPADPSITAALRE
>Mature_333_residues
ADLAPTVGIAAACRVLGVPRSAVYRAAPPAPAAVPRRRPARALTPNEVAHIRTVLNSDRFADCTPRQIYATLLDEGTYLC
HWRTMYRILAAHREVRERRNQLRHPTYAAPELLATGPNQLWSWDITKFKGPTTWSYFYAYVILDVFSRCIVGWMVMERES
AALAEQCIAETYHREGIQPNQRTLHADNGSAMTAKPVAQLLADLGVTKTHSRPHVSNDNPYSEAQFKTTKYRPDFPDRFG
SLIDARAWMRAFVQWYNHDHCHSGIGLLPPAVVHHGQASAMTTARQQVLATAYAAHPERFVRGTPRPPRVPQAVWINRPA
GPADPSITAALRE

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 37415; Mature: 37284

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLAPTVGIAAACRVLGVPRSAVYRAAPPAPAAVPRRRPARALTPNEVAHIRTVLNSDR
CCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
FADCTPRQIYATLLDEGTYLCHWRTMYRILAAHREVRERRNQLRHPTYAAPELLATGPNQ
CCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
LWSWDITKFKGPTTWSYFYAYVILDVFSRCIVGWMVMERESAALAEQCIAETYHREGIQP
CEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NQRTLHADNGSAMTAKPVAQLLADLGVTKTHSRPHVSNDNPYSEAQFKTTKYRPDFPDRF
CCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHH
GSLIDARAWMRAFVQWYNHDHCHSGIGLLPPAVVHHGQASAMTTARQQVLATAYAAHPER
HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCHHH
FVRGTPRPPRVPQAVWINRPAGPADPSITAALRE
HHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCC
>Mature Secondary Structure 
ADLAPTVGIAAACRVLGVPRSAVYRAAPPAPAAVPRRRPARALTPNEVAHIRTVLNSDR
CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
FADCTPRQIYATLLDEGTYLCHWRTMYRILAAHREVRERRNQLRHPTYAAPELLATGPNQ
CCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
LWSWDITKFKGPTTWSYFYAYVILDVFSRCIVGWMVMERESAALAEQCIAETYHREGIQP
CEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NQRTLHADNGSAMTAKPVAQLLADLGVTKTHSRPHVSNDNPYSEAQFKTTKYRPDFPDRF
CCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHH
GSLIDARAWMRAFVQWYNHDHCHSGIGLLPPAVVHHGQASAMTTARQQVLATAYAAHPER
HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCHHH
FVRGTPRPPRVPQAVWINRPAGPADPSITAALRE
HHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]