Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898589

Identifier: 159898589

GI number: 159898589

Start: 2578608

End: 2579024

Strand: Direct

Name: 159898589

Synonym: Haur_2068

Alternate gene names: NA

Gene position: 2578608-2579024 (Clockwise)

Preceding gene: 159898588

Following gene: 159898590

Centisome position: 40.63

GC content: 65.47

Gene sequence:

>417_bases
ATGGCCAGCAAAAAAACAACGCCCGACCAATCGACCCATGACCCCGAAGTGCGGCCCAAAGCGGCTCGTACCCACTGGAG
TGCCCGCGACCGTCTGCGCATTCTGGCCGCTGCCGATGCGTGCGCCCCCGGCGAACTTGGTGCCTTGATGCGCCGCGAGG
GGATTTACTCCTCGCACCTCGCCCGCTGGCGACGACAACGCGCCGAGGGCGAACTCGCCGCACTCACGCCCAAACGCAAG
GCCGCACCCACGCCCGAAGCCCAGCGCCAGACCGCCGAACTGGCTCGCCTTCGCCGCGAAAACCAGCGGCTTCAGGCCAA
ATTGGCCCAAGCCGAGGTGATCATCGATGTGCAAAAAAAGCTTGCAACCCTGTTGGGGATCACGCTCCCAGCGCCGCCGA
CCGACGCGCAGGATTAA

Upstream 100 bases:

>100_bases
GGTTGGCTGTTGTTGCGGCCATACGAATCGCCCTCTGTGCTAACATGGGTGAGACAGATCTGAGATTATGATCTTAAGTC
GAGGGCCGCAAGGAGTTCCC

Downstream 100 bases:

>100_bases
TCATCGCCGTGGCTGATCTAGCTCCCACGGTGGGCATTGCCGCTGCCTGTCGGGTACTCGGTGTCCCGCGCAGCGCCGTC
TATCGTGCGGCCCCGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MASKKTTPDQSTHDPEVRPKAARTHWSARDRLRILAAADACAPGELGALMRREGIYSSHLARWRRQRAEGELAALTPKRK
AAPTPEAQRQTAELARLRRENQRLQAKLAQAEVIIDVQKKLATLLGITLPAPPTDAQD

Sequences:

>Translated_138_residues
MASKKTTPDQSTHDPEVRPKAARTHWSARDRLRILAAADACAPGELGALMRREGIYSSHLARWRRQRAEGELAALTPKRK
AAPTPEAQRQTAELARLRRENQRLQAKLAQAEVIIDVQKKLATLLGITLPAPPTDAQD
>Mature_137_residues
ASKKTTPDQSTHDPEVRPKAARTHWSARDRLRILAAADACAPGELGALMRREGIYSSHLARWRRQRAEGELAALTPKRKA
APTPEAQRQTAELARLRRENQRLQAKLAQAEVIIDVQKKLATLLGITLPAPPTDAQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15287; Mature: 15155

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKKTTPDQSTHDPEVRPKAARTHWSARDRLRILAAADACAPGELGALMRREGIYSSHL
CCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
ARWRRQRAEGELAALTPKRKAAPTPEAQRQTAELARLRRENQRLQAKLAQAEVIIDVQKK
HHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLLGITLPAPPTDAQD
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ASKKTTPDQSTHDPEVRPKAARTHWSARDRLRILAAADACAPGELGALMRREGIYSSHL
CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
ARWRRQRAEGELAALTPKRKAAPTPEAQRQTAELARLRRENQRLQAKLAQAEVIIDVQKK
HHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLLGITLPAPPTDAQD
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA