Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898552

Identifier: 159898552

GI number: 159898552

Start: 2520935

End: 2522398

Strand: Reverse

Name: 159898552

Synonym: Haur_2028

Alternate gene names: NA

Gene position: 2522398-2520935 (Counterclockwise)

Preceding gene: 159898553

Following gene: 159898551

Centisome position: 39.74

GC content: 50.68

Gene sequence:

>1464_bases
ATGACAGCTCAACAACCTGAACAATTGACACCAGACGCTATTTTAGCGCATTTAGGGCTATTCGATCGGCTTGAACCCAC
GCTTGATCGCTTTGCCGACCGCCAACAAGCATTCGATTGGCTGCACCTTGGATTAACCGATATTCCGGTTGGACAAGTGC
TGGATTTGATTCAGCACTCACCAACCTTGCTGCCACCCCGCACGGGACATATGGGCAATTGGGAAGAAATTGGCCATGGC
CGAGCCGGTATGATGGATTTTAATCAAGCGATTTGTAGCCAAGGCTATGGATACCCATTAATTTACTGTTTTAATCAGAC
TGAGGATGCGGCCTTAGAACGTGGGGATTGGGTCTACTTGCCTGGTTCGTTGATCGATCATGGCAAACGGACTCTGCTAC
CCTTGTACACCTGGGATGGACAAGGCTTGGTTGAACGACAACGGGAGCAGCCGCTCTTTACGCCATTTGTTCAAACGAGT
GTTGATGGGGGGCAAATCCCGCTCAATACCTTGCATTGGCAACGGATGCAGCAATTTCAGCAATTTGAATTTCGGCTTGA
AGCACAAAGCGTCTGGCACCATGCCGAGCTAGCCAAAGCGATTGTCCAGCATTTACTGGAACAAGCAGCCATCCAACCCA
ATACACGCCGGGCCTTTCAAGATATTTTAAGCCATCAGGTCAGCCTTGATGGCAGAATGCAACGGGTTGCGATCCAACGC
GAAGCCCAGGGGTATCGCATGGGGGCAATGTTCTATAGCTCAGCAGCAGACCTAGCCGAGGCGAGTATGCTGCCATGGCT
TGCAGTAGCCGAGCCAGCGAGCTTTTTTGCCAATATCAAACAACTACCAAACCAGATGCCGCTCTGTTCGCATTTGCTCG
CAGGCATTTTCTCGGCAATCTTTCATACCCATTACCCCAACACCACGGTTGAGCGCCAAACCATGTGTCGGCCATTCAAT
CCGCATTTCCACTGGGGTGCGCGGGATATGGCTGGCTACCCACCCTATCGCAATGGCTATATCGCCGAAAAATCAACCAC
CAAAAGCTATCGCACACTGTGCCAAAGCATCATTGATGCATTTGACGAAGTTGATCCGATGCTGCTGATCTTATTACCTG
CGGTGATCTTCGCGCTTTGTCCAACCAACCAGCATCCTCACGATGCAGAGGCACTAACAGAGTTGTTCAAGCAGGTGCAA
CAGCTTGAGCCAAGCAGCGATCAAACTACCTATCAGCAAACAATTAGTCAGCAGGTAGCAGGATGGCTCGAACGCCAACG
GACAATCCTATCGACCTACTGGATACATCGATTTGCGCCACGTCAGGGTATTTTGCACACCCAAACGCTGGTGAGCAGTC
GCCCAGTTGAACCAATTGGCTTTCGAGAATTGAGCTTTCGTCAGGCCTGCATGATCGTTGGCGCATTAATCCATTGGCTT
GCGCCAAATTCAGCATTGGCCTAA

Upstream 100 bases:

>100_bases
TTGATAACCCGAGTGAATTGCGAACCTACTACGCTGGCGGCATTCTCCAACAGGTTGTGCAACGTTTGGCGCTGCCTCAA
GCAAAGCAGGTGAATCAACA

Downstream 100 bases:

>100_bases
CGAATACACAAAAGCGTCTGGAACCCTATTGAGGAACGCATGCAACAGCTAAGCAAACGCTTGAATATTCCAATTGCAGG
GTTATGGTTATTAGCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTAQQPEQLTPDAILAHLGLFDRLEPTLDRFADRQQAFDWLHLGLTDIPVGQVLDLIQHSPTLLPPRTGHMGNWEEIGHG
RAGMMDFNQAICSQGYGYPLIYCFNQTEDAALERGDWVYLPGSLIDHGKRTLLPLYTWDGQGLVERQREQPLFTPFVQTS
VDGGQIPLNTLHWQRMQQFQQFEFRLEAQSVWHHAELAKAIVQHLLEQAAIQPNTRRAFQDILSHQVSLDGRMQRVAIQR
EAQGYRMGAMFYSSAADLAEASMLPWLAVAEPASFFANIKQLPNQMPLCSHLLAGIFSAIFHTHYPNTTVERQTMCRPFN
PHFHWGARDMAGYPPYRNGYIAEKSTTKSYRTLCQSIIDAFDEVDPMLLILLPAVIFALCPTNQHPHDAEALTELFKQVQ
QLEPSSDQTTYQQTISQQVAGWLERQRTILSTYWIHRFAPRQGILHTQTLVSSRPVEPIGFRELSFRQACMIVGALIHWL
APNSALA

Sequences:

>Translated_487_residues
MTAQQPEQLTPDAILAHLGLFDRLEPTLDRFADRQQAFDWLHLGLTDIPVGQVLDLIQHSPTLLPPRTGHMGNWEEIGHG
RAGMMDFNQAICSQGYGYPLIYCFNQTEDAALERGDWVYLPGSLIDHGKRTLLPLYTWDGQGLVERQREQPLFTPFVQTS
VDGGQIPLNTLHWQRMQQFQQFEFRLEAQSVWHHAELAKAIVQHLLEQAAIQPNTRRAFQDILSHQVSLDGRMQRVAIQR
EAQGYRMGAMFYSSAADLAEASMLPWLAVAEPASFFANIKQLPNQMPLCSHLLAGIFSAIFHTHYPNTTVERQTMCRPFN
PHFHWGARDMAGYPPYRNGYIAEKSTTKSYRTLCQSIIDAFDEVDPMLLILLPAVIFALCPTNQHPHDAEALTELFKQVQ
QLEPSSDQTTYQQTISQQVAGWLERQRTILSTYWIHRFAPRQGILHTQTLVSSRPVEPIGFRELSFRQACMIVGALIHWL
APNSALA
>Mature_486_residues
TAQQPEQLTPDAILAHLGLFDRLEPTLDRFADRQQAFDWLHLGLTDIPVGQVLDLIQHSPTLLPPRTGHMGNWEEIGHGR
AGMMDFNQAICSQGYGYPLIYCFNQTEDAALERGDWVYLPGSLIDHGKRTLLPLYTWDGQGLVERQREQPLFTPFVQTSV
DGGQIPLNTLHWQRMQQFQQFEFRLEAQSVWHHAELAKAIVQHLLEQAAIQPNTRRAFQDILSHQVSLDGRMQRVAIQRE
AQGYRMGAMFYSSAADLAEASMLPWLAVAEPASFFANIKQLPNQMPLCSHLLAGIFSAIFHTHYPNTTVERQTMCRPFNP
HFHWGARDMAGYPPYRNGYIAEKSTTKSYRTLCQSIIDAFDEVDPMLLILLPAVIFALCPTNQHPHDAEALTELFKQVQQ
LEPSSDQTTYQQTISQQVAGWLERQRTILSTYWIHRFAPRQGILHTQTLVSSRPVEPIGFRELSFRQACMIVGALIHWLA
PNSALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55419; Mature: 55288

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQQPEQLTPDAILAHLGLFDRLEPTLDRFADRQQAFDWLHLGLTDIPVGQVLDLIQHS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
PTLLPPRTGHMGNWEEIGHGRAGMMDFNQAICSQGYGYPLIYCFNQTEDAALERGDWVYL
CCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCEEEE
PGSLIDHGKRTLLPLYTWDGQGLVERQREQPLFTPFVQTSVDGGQIPLNTLHWQRMQQFQ
CCHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
QFEFRLEAQSVWHHAELAKAIVQHLLEQAAIQPNTRRAFQDILSHQVSLDGRMQRVAIQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
EAQGYRMGAMFYSSAADLAEASMLPWLAVAEPASFFANIKQLPNQMPLCSHLLAGIFSAI
HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FHTHYPNTTVERQTMCRPFNPHFHWGARDMAGYPPYRNGYIAEKSTTKSYRTLCQSIIDA
HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHH
FDEVDPMLLILLPAVIFALCPTNQHPHDAEALTELFKQVQQLEPSSDQTTYQQTISQQVA
HHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GWLERQRTILSTYWIHRFAPRQGILHTQTLVSSRPVEPIGFRELSFRQACMIVGALIHWL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
APNSALA
CCCCCCC
>Mature Secondary Structure 
TAQQPEQLTPDAILAHLGLFDRLEPTLDRFADRQQAFDWLHLGLTDIPVGQVLDLIQHS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
PTLLPPRTGHMGNWEEIGHGRAGMMDFNQAICSQGYGYPLIYCFNQTEDAALERGDWVYL
CCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCEEEE
PGSLIDHGKRTLLPLYTWDGQGLVERQREQPLFTPFVQTSVDGGQIPLNTLHWQRMQQFQ
CCHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
QFEFRLEAQSVWHHAELAKAIVQHLLEQAAIQPNTRRAFQDILSHQVSLDGRMQRVAIQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
EAQGYRMGAMFYSSAADLAEASMLPWLAVAEPASFFANIKQLPNQMPLCSHLLAGIFSAI
HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FHTHYPNTTVERQTMCRPFNPHFHWGARDMAGYPPYRNGYIAEKSTTKSYRTLCQSIIDA
HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHH
FDEVDPMLLILLPAVIFALCPTNQHPHDAEALTELFKQVQQLEPSSDQTTYQQTISQQVA
HHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GWLERQRTILSTYWIHRFAPRQGILHTQTLVSSRPVEPIGFRELSFRQACMIVGALIHWL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
APNSALA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA